FFCP PHASE1:Hg19::chr9:139847347..139847358,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:139847347..139847358,+
|short_description=p9@LCN12
|description=CAGE_peak_9_at_LCN12_5end
|association_with_transcript=3bp_to_ENST00000491603_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=286256 | |EntrezGene=286256 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28733 | |HGNC=28733 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000491603_5end | |||
|cluster_id=chr9:139847347..139847358,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_9_at_LCN12_5end | |||
|id=chr9:139847347..139847358,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;5.48e-18;2!UBERON:0007123;6.78e-08;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!5.55e-25!41;UBERON:0001890!5.55e-25!41;UBERON:0006240!5.55e-25!41;UBERON:0003080!2.68e-24!42;UBERON:0001049!7.90e-24!57;UBERON:0005068!7.90e-24!57;UBERON:0006241!7.90e-24!57;UBERON:0007135!7.90e-24!57;UBERON:0007023!6.98e-23!115;UBERON:0001893!8.55e-21!34;UBERON:0002616!1.96e-20!59;UBERON:0001869!2.27e-19!32;UBERON:0002791!1.08e-18!33;UBERON:0000955!1.66e-18!69;UBERON:0006238!1.66e-18!69;UBERON:0002020!3.74e-18!34;UBERON:0003528!3.74e-18!34;UBERON:0003056!1.51e-17!61;UBERON:0005743!2.46e-17!86;UBERON:0000073!9.18e-17!94;UBERON:0001016!9.18e-17!94;UBERON:0001017!1.33e-16!82;UBERON:0003075!7.95e-16!86;UBERON:0007284!7.95e-16!86;UBERON:0002346!6.76e-15!90;UBERON:0002619!6.92e-12!22;UBERON:0000153!5.80e-11!129;UBERON:0007811!5.80e-11!129;UBERON:0002420!1.05e-10!9;UBERON:0007245!1.05e-10!9;UBERON:0010009!1.05e-10!9;UBERON:0010011!1.05e-10!9;UBERON:0000454!1.05e-10!9;UBERON:0000033!1.53e-10!123;UBERON:0002308!2.02e-10!9;UBERON:0000125!2.02e-10!9;UBERON:0000956!2.51e-10!25;UBERON:0000203!2.51e-10!25;UBERON:0001950!2.72e-10!20;UBERON:0000200!4.02e-10!6;UBERON:0000369!2.92e-09!4;UBERON:0002435!2.92e-09!4;UBERON:0000204!2.92e-09!4;UBERON:0010082!2.92e-09!4;UBERON:0009663!5.97e-09!7;UBERON:0001897!7.28e-09!2;UBERON:0001871!4.30e-08!7;UBERON:0000349!7.44e-08!5;UBERON:0004121!7.50e-08!169;UBERON:0000924!1.51e-07!173;UBERON:0006601!1.51e-07!173;UBERON:0000062!3.86e-07!511;UBERON:0001872!4.10e-07!5;UBERON:0000025!5.53e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.99e-45;3!UBERON:0004054;4.99e-45;3!UBERON:0001301;1.84e-34;1!UBERON:0001000;2.58e-34;1!UBERON:0005352;2.58e-34;1!UBERON:0005904;4.28e-34;4!UBERON:0001876;9.86e-18;2!UBERON:0001897;9.86e-18;2!UBERON:0010225;9.86e-18;2!UBERON:0000058;2.49e-14;10!UBERON:0003135;4.00e-13;11!UBERON:0002784;1.50e-09;4!UBERON:0002046;6.78e-08;5!UBERON:0000349;6.78e-08;5!UBERON:0004175;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.00e-45,3;UBERON:0004054,5.00e-45,3;UBERON:0001301,1.84e-34,1;UBERON:0001000,2.58e-34,1;UBERON:0005352,2.58e-34,1;UBERON:0005904,4.28e-34,4;UBERON:0001876,7.67e-18,2;UBERON:0001897,9.07e-18,2;UBERON:0010225,9.07e-18,2;UBERON:0003135,4.00e-13,11;UBERON:0002784,1.44e-09,4;UBERON:0000058,5.16e-08,19;UBERON:0000349,6.13e-08,5;UBERON:0002046,7.49e-08,5;UBERON:0004117,7.49e-08,5;UBERON:0007689,7.49e-08,5;UBERON:0007123,7.49e-08,5;UBERON:0003091,7.49e-08,5;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
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| ||
|short_description=p9@LCN12 | |||
}} | }} |
Latest revision as of 14:26, 16 September 2015
Short description: | p9@LCN12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LCN12_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 3bp_to_ENST00000491603_5end |
EntrezGene: | LCN12 |
HGNC: | 28733 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 5.00e-45 | 3 |
internal male genitalia | 5.00e-45 | 3 |
epididymis | 1.84e-34 | 1 |
vas deferens | 2.58e-34 | 1 |
spermatic cord | 2.58e-34 | 1 |
duct of male reproductive system | 4.28e-34 | 4 |
amygdala | 7.67e-18 | 2 |
dorsal plus ventral thalamus | 9.07e-18 | 2 |
thalamic complex | 9.07e-18 | 2 |
male reproductive organ | 4.00e-13 | 11 |
regional part of diencephalon | 1.44e-09 | 4 |
duct | 5.16e-08 | 19 |
limbic system | 6.13e-08 | 5 |
thyroid gland | 7.49e-08 | 5 |
pharyngeal pouch | 7.49e-08 | 5 |
thyroid diverticulum | 7.49e-08 | 5 |
pharyngeal pouch 2 | 7.49e-08 | 5 |
thyroid primordium | 7.49e-08 | 5 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |