FFCP PHASE1:Hg19::chr5:160112418..160112436,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23120 | |EntrezGene=23120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13543 | |HGNC=13543 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000326831_5end | |association_with_transcript=-26bp_to_ENST00000326831_5end | ||
|cluster_id=chr5:160112418..160112436,- | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_4_at_ATP10B_5end | |description=CAGE_peak_4_at_ATP10B_5end | ||
|id=chr5:160112418..160112436,- | |id=chr5:160112418..160112436,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.33e-12;1!UBERON:0001045;2.91e-12;1!UBERON:0007297;5.57e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.34e-19!35;UBERON:0000160!1.07e-18!27;UBERON:0004921!9.21e-16!129;UBERON:0004185!9.21e-16!129;UBERON:0004119!5.49e-15!169;UBERON:0000925!5.49e-15!169;UBERON:0006595!5.49e-15!169;UBERON:0001007!1.97e-14!155;UBERON:0001555!1.97e-14!155;UBERON:0007026!1.97e-14!155;UBERON:0000059!2.76e-13!11;UBERON:0003127!3.20e-09!2;UBERON:0004907!5.35e-08!5;UBERON:0007023!5.91e-08!115;UBERON:0001155!9.36e-08!9;UBERON:0000077!2.14e-07!130;UBERON:0001046!7.76e-07!19 | |ontology_enrichment_uberon=UBERON:0005409!4.34e-19!35;UBERON:0000160!1.07e-18!27;UBERON:0004921!9.21e-16!129;UBERON:0004185!9.21e-16!129;UBERON:0004119!5.49e-15!169;UBERON:0000925!5.49e-15!169;UBERON:0006595!5.49e-15!169;UBERON:0001007!1.97e-14!155;UBERON:0001555!1.97e-14!155;UBERON:0007026!1.97e-14!155;UBERON:0000059!2.76e-13!11;UBERON:0003127!3.20e-09!2;UBERON:0004907!5.35e-08!5;UBERON:0007023!5.91e-08!115;UBERON:0001155!9.36e-08!9;UBERON:0000077!2.14e-07!130;UBERON:0001046!7.76e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;8.71e-49;17!UBERON:0005409;1.01e-46;22!UBERON:0000059;7.75e-36;11!UBERON:0004921;6.65e-28;33!UBERON:0002108;7.55e-21;4!UBERON:0001155;3.13e-20;9!UBERON:0004907;3.99e-20;5!UBERON:0006947;1.06e-15;3!UBERON:0004054;1.06e-15;3!UBERON:0001301;1.05e-12;1!UBERON:0001154;2.91e-12;1!UBERON:0001153;2.91e-12;1!UBERON:0009854;2.91e-12;1!UBERON:0001000;4.07e-12;1!UBERON:0005352;4.07e-12;1!UBERON:0005904;5.10e-12;4!UBERON:0001052;8.39e-12;4!UBERON:0001555;2.73e-11;54!UBERON:0000058;1.87e-10;10!UBERON:0001007;2.03e-08;81!UBERON:0002294;3.79e-07;7!UBERON:0001173;3.79e-07;7!UBERON:0003127;7.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.21e-49,17;UBERON:0005409,3.56e-41,25;UBERON:0000059,8.49e-36,11;UBERON:0002108,7.30e-21,4;UBERON:0001155,3.05e-20,9;UBERON:0004907,4.41e-20,5;UBERON:0006947,1.06e-15,3;UBERON:0004054,1.06e-15,3;UBERON:0001301,1.11e-12,1;UBERON:0001154,2.75e-12,1;UBERON:0001153,2.75e-12,1;UBERON:0001045,2.75e-12,1;UBERON:0001000,3.85e-12,1;UBERON:0005352,3.85e-12,1;UBERON:0005904,5.10e-12,4;UBERON:0001052,9.37e-12,4;UBERON:0004921,1.06e-11,118;UBERON:0001007,5.81e-11,145;UBERON:0001555,5.81e-11,145;UBERON:0007026,5.81e-11,145;UBERON:0004119,9.16e-10,160;UBERON:0000925,9.16e-10,160;UBERON:0006595,9.16e-10,160;UBERON:0003127,7.61e-07,2;UBERON:0007023,9.24e-07,114 | |||
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| ||
|short_description=p4@ATP10B | |short_description=p4@ATP10B | ||
}} | }} |
Latest revision as of 16:39, 16 September 2015
Short description: | p4@ATP10B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATP10B_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | -26bp_to_ENST00000326831_5end |
EntrezGene: | ATP10B |
HGNC: | 13543 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 9.21e-49 | 17 |
gastrointestinal system | 3.56e-41 | 25 |
large intestine | 8.49e-36 | 11 |
small intestine | 7.30e-21 | 4 |
colon | 3.05e-20 | 9 |
lower digestive tract | 4.41e-20 | 5 |
male genital duct | 1.06e-15 | 3 |
internal male genitalia | 1.06e-15 | 3 |
epididymis | 1.11e-12 | 1 |
vermiform appendix | 2.75e-12 | 1 |
caecum | 2.75e-12 | 1 |
midgut | 2.75e-12 | 1 |
vas deferens | 3.85e-12 | 1 |
spermatic cord | 3.85e-12 | 1 |
duct of male reproductive system | 5.10e-12 | 4 |
rectum | 9.37e-12 | 4 |
subdivision of digestive tract | 1.06e-11 | 118 |
digestive system | 5.81e-11 | 145 |
digestive tract | 5.81e-11 | 145 |
primitive gut | 5.81e-11 | 145 |
endoderm-derived structure | 9.16e-10 | 160 |
endoderm | 9.16e-10 | 160 |
presumptive endoderm | 9.16e-10 | 160 |
open tracheal system trachea | 7.61e-07 | 2 |
adult organism | 9.24e-07 | 114 |