FFCP PHASE1:Hg19::chr20:47804984..47805048,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6780 | |EntrezGene=6780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11370 | |HGNC=11370 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JW30,Q5JW29,O95793,Q5JW28,B3KRE0,Q6PJX3 | |UniProt=Q5JW30,Q5JW29,O95793,Q5JW28,B3KRE0,Q6PJX3 | ||
|association_with_transcript=-80bp_to_ENST00000340954,ENST00000347458,ENST00000360426,ENST00000371792,ENST00000371802,ENST00000371805,ENST00000371828,ENST00000371856,ENST00000437404,NM_001037328,NM_004602,NM_017452,NM_017453,NM_017454,uc002xua.2,uc002xub.2,uc002xuc.2,uc002xud.2, | |association_with_transcript=-80bp_to_ENST00000340954,ENST00000347458,ENST00000360426,ENST00000371792,ENST00000371802,ENST00000371805,ENST00000371828,ENST00000371856,ENST00000437404,NM_001037328,NM_004602,NM_017452,NM_017453,NM_017454,uc002xua.2,uc002xub.2,uc002xuc.2,uc002xud.2,uc002 | ||
|cluster_id=chr20:47804984..47805048,- | |||
|description=CAGE_peak_6_at_STAU1_5end | |description=CAGE_peak_6_at_STAU1_5end | ||
|id=chr20:47804984..47805048,- | |id=chr20:47804984..47805048,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.69e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.07e-19!57;UBERON:0005068!6.07e-19!57;UBERON:0006241!6.07e-19!57;UBERON:0007135!6.07e-19!57;UBERON:0003075!2.05e-18!86;UBERON:0007284!2.05e-18!86;UBERON:0002346!4.30e-18!90;UBERON:0000119!3.64e-17!312;UBERON:0000483!8.03e-17!309;UBERON:0002616!3.93e-16!59;UBERON:0000955!6.49e-16!69;UBERON:0006238!6.49e-16!69;UBERON:0002780!2.12e-14!41;UBERON:0001890!2.12e-14!41;UBERON:0006240!2.12e-14!41;UBERON:0000025!2.92e-14!194;UBERON:0001017!5.12e-14!82;UBERON:0000475!8.89e-14!365;UBERON:0000477!9.04e-14!286;UBERON:0002020!1.13e-13!34;UBERON:0003528!1.13e-13!34;UBERON:0005743!1.31e-13!86;UBERON:0000073!1.47e-13!94;UBERON:0001016!1.47e-13!94;UBERON:0000468!1.51e-13!659;UBERON:0003080!1.83e-13!42;UBERON:0001869!1.90e-13!32;UBERON:0001893!3.64e-13!34;UBERON:0004111!4.85e-13!241;UBERON:0007023!6.61e-13!115;UBERON:0002791!1.52e-12!33;UBERON:0003056!3.15e-12!61;UBERON:0000033!3.84e-12!123;UBERON:0000467!7.21e-12!625;UBERON:0000481!8.11e-12!347;UBERON:0000480!1.32e-11!626;UBERON:0002619!6.73e-11!22;UBERON:0000153!2.07e-10!129;UBERON:0007811!2.07e-10!129;UBERON:0000923!4.89e-10!604;UBERON:0005291!4.89e-10!604;UBERON:0006598!4.89e-10!604;UBERON:0002532!4.89e-10!604;UBERON:0001950!8.28e-10!20;UBERON:0002050!8.43e-10!605;UBERON:0005423!8.43e-10!605;UBERON:0000956!8.76e-10!25;UBERON:0000203!8.76e-10!25;UBERON:0000064!2.76e-09!219;UBERON:0000922!5.63e-09!612;UBERON:0000924!3.35e-08!173;UBERON:0006601!3.35e-08!173;UBERON:0004121!3.74e-08!169;UBERON:0003076!8.26e-07!15;UBERON:0003057!8.26e-07!15 | |ontology_enrichment_uberon=UBERON:0001049!6.07e-19!57;UBERON:0005068!6.07e-19!57;UBERON:0006241!6.07e-19!57;UBERON:0007135!6.07e-19!57;UBERON:0003075!2.05e-18!86;UBERON:0007284!2.05e-18!86;UBERON:0002346!4.30e-18!90;UBERON:0000119!3.64e-17!312;UBERON:0000483!8.03e-17!309;UBERON:0002616!3.93e-16!59;UBERON:0000955!6.49e-16!69;UBERON:0006238!6.49e-16!69;UBERON:0002780!2.12e-14!41;UBERON:0001890!2.12e-14!41;UBERON:0006240!2.12e-14!41;UBERON:0000025!2.92e-14!194;UBERON:0001017!5.12e-14!82;UBERON:0000475!8.89e-14!365;UBERON:0000477!9.04e-14!286;UBERON:0002020!1.13e-13!34;UBERON:0003528!1.13e-13!34;UBERON:0005743!1.31e-13!86;UBERON:0000073!1.47e-13!94;UBERON:0001016!1.47e-13!94;UBERON:0000468!1.51e-13!659;UBERON:0003080!1.83e-13!42;UBERON:0001869!1.90e-13!32;UBERON:0001893!3.64e-13!34;UBERON:0004111!4.85e-13!241;UBERON:0007023!6.61e-13!115;UBERON:0002791!1.52e-12!33;UBERON:0003056!3.15e-12!61;UBERON:0000033!3.84e-12!123;UBERON:0000467!7.21e-12!625;UBERON:0000481!8.11e-12!347;UBERON:0000480!1.32e-11!626;UBERON:0002619!6.73e-11!22;UBERON:0000153!2.07e-10!129;UBERON:0007811!2.07e-10!129;UBERON:0000923!4.89e-10!604;UBERON:0005291!4.89e-10!604;UBERON:0006598!4.89e-10!604;UBERON:0002532!4.89e-10!604;UBERON:0001950!8.28e-10!20;UBERON:0002050!8.43e-10!605;UBERON:0005423!8.43e-10!605;UBERON:0000956!8.76e-10!25;UBERON:0000203!8.76e-10!25;UBERON:0000064!2.76e-09!219;UBERON:0000922!5.63e-09!612;UBERON:0000924!3.35e-08!173;UBERON:0006601!3.35e-08!173;UBERON:0004121!3.74e-08!169;UBERON:0003076!8.26e-07!15;UBERON:0003057!8.26e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.95e-21;32!UBERON:0002619;3.43e-21;22!UBERON:0003528;3.66e-21;34!UBERON:0002020;3.66e-21;34!UBERON:0001893;1.10e-19;34!UBERON:0002791;1.74e-19;32!UBERON:0001950;3.27e-19;20!UBERON:0000956;6.54e-18;25!UBERON:0000203;6.54e-18;25!UBERON:0002780;5.43e-15;41!UBERON:0001890;5.43e-15;41!UBERON:0000073;1.74e-13;53!UBERON:0002616;1.74e-13;53!UBERON:0000955;4.37e-11;68!UBERON:0001017;7.40e-11;75!UBERON:0001016;1.75e-09;83!UBERON:0000200;4.45e-09;6!UBERON:0001872;1.20e-07;5!UBERON:0002420;2.03e-07;9!UBERON:0007245;2.03e-07;9!UBERON:0010009;2.03e-07;9!UBERON:0010011;2.03e-07;9!UBERON:0000454;2.03e-07;9!UBERON:0000125;2.17e-07;9!UBERON:0002308;2.17e-07;9!UBERON:0000349;4.23e-07;5 | |||
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| ||
|short_description=p6@STAU1 | |short_description=p6@STAU1 | ||
}} | }} |
Latest revision as of 18:34, 16 September 2015
Short description: | p6@STAU1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_STAU1_5end |
Coexpression cluster: | NA |
Association with transcript: | -80bp_to_ENST00000340954, ENST00000347458, ENST00000360426, ENST00000371792, ENST00000371802, ENST00000371805, ENST00000371828, ENST00000371856, ENST00000437404, NM_001037328, NM_004602, NM_017452, NM_017453, NM_017454, uc002xua.2, uc002xub.2, uc002xuc.2, uc002xud.2, uc002 |
EntrezGene: | STAU1 |
HGNC: | 11370 |
UniProt: | Q5JW30Q5JW29O95793Q5JW28B3KRE0Q6PJX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data