FFCP PHASE1:Hg19::chr1:24306768..24306779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100505793,10772 | |EntrezGene=100505793,10772 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16713 | |HGNC=16713 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JRI1 | |UniProt=Q5JRI1 | ||
|association_with_transcript=4bp_to_ENST00000374453_5end | |association_with_transcript=4bp_to_ENST00000374453_5end | ||
|cluster_id=chr1:24306768..24306779,- | |||
|coexpression_cluster_id=C3956 | |||
|description=CAGE_peak_3_at_SRSF10_5end | |description=CAGE_peak_3_at_SRSF10_5end | ||
|id=chr1:24306768..24306779,- | |id=chr1:24306768..24306779,- | ||
|ontology_enrichment_celltype=CL:0000037!1.00e-30!172;CL:0000566!1.00e-30!172;CL:0002032!2.09e-28!165;CL:0000837!2.09e-28!165;CL:0000988!1.91e-27!182;CL:0002031!1.30e-22!124;CL:0000738!3.08e-22!140;CL:0002087!3.46e-22!119;CL:0000542!7.91e-19!53;CL:0000051!7.91e-19!53;CL:0000838!2.87e-18!52;CL:0000763!1.85e-11!112;CL:0000049!1.85e-11!112;CL:0000084!1.09e-09!25;CL:0000827!1.09e-09!25;CL:0000860!2.38e-09!45;CL:0002057!6.74e-09!42;CL:0000945!7.37e-09!24;CL:0000826!7.37e-09!24;CL:0000791!6.36e-08!18;CL:0000789!6.36e-08!18;CL:0002420!6.36e-08!18;CL:0002419!6.36e-08!18;CL:0000790!6.36e-08!18;CL:0000236!2.01e-07!14;CL:0000557!8.36e-07!71;CL:0000839!9.28e-07!70 | |ontology_enrichment_celltype=CL:0000037!1.00e-30!172;CL:0000566!1.00e-30!172;CL:0002032!2.09e-28!165;CL:0000837!2.09e-28!165;CL:0000988!1.91e-27!182;CL:0002031!1.30e-22!124;CL:0000738!3.08e-22!140;CL:0002087!3.46e-22!119;CL:0000542!7.91e-19!53;CL:0000051!7.91e-19!53;CL:0000838!2.87e-18!52;CL:0000763!1.85e-11!112;CL:0000049!1.85e-11!112;CL:0000084!1.09e-09!25;CL:0000827!1.09e-09!25;CL:0000860!2.38e-09!45;CL:0002057!6.74e-09!42;CL:0000945!7.37e-09!24;CL:0000826!7.37e-09!24;CL:0000791!6.36e-08!18;CL:0000789!6.36e-08!18;CL:0002420!6.36e-08!18;CL:0002419!6.36e-08!18;CL:0000790!6.36e-08!18;CL:0000236!2.01e-07!14;CL:0000557!8.36e-07!71;CL:0000839!9.28e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000542;3.29e-11;53!CL:0000860;4.91e-10;33!CL:0002057;4.91e-10;33!CL:0000084;9.35e-10;25!CL:0000945;7.12e-09;24!CL:0002087;3.68e-08;104!CL:0000791;5.32e-08;18!CL:0000789;5.32e-08;18!CL:0002419;5.32e-08;18!CL:0000236;3.02e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.19e-31,168;CL:0002032,1.52e-28,161;CL:0000837,1.52e-28,161;CL:0000988,3.54e-28,177;CL:0002031,8.48e-23,120;CL:0002087,2.19e-22,115;CL:0000738,2.20e-22,136;CL:0000542,7.70e-19,53;CL:0000051,7.70e-19,53;CL:0000838,2.80e-18,52;CL:0000763,1.70e-11,108;CL:0000049,1.70e-11,108;CL:0000084,1.08e-09,25;CL:0000827,1.08e-09,25;CL:0000860,6.67e-09,42;CL:0002057,6.67e-09,42;CL:0000945,7.29e-09,24;CL:0000826,7.29e-09,24;CL:0000791,6.30e-08,18;CL:0000789,6.30e-08,18;CL:0002420,6.30e-08,18;CL:0002419,6.30e-08,18;CL:0000790,6.30e-08,18;CL:0000236,1.99e-07,14;CL:0000473,3.28e-07,48;CL:0000234,3.28e-07,48;CL:0000557,8.03e-07,67;CL:0000839,8.89e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000051;3.29e-11;53!CL:0000790;5.32e-08;18!CL:0002057;5.73e-07;42 | |||
|ontology_enrichment_disease=DOID:162!8.61e-20!235;DOID:14566!3.20e-18!239;DOID:0050686!2.83e-13!137;DOID:2531!1.43e-12!51;DOID:0060083!1.43e-12!51;DOID:305!1.54e-11!106;DOID:0050687!2.28e-10!143;DOID:1240!3.94e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.58e-08;39!DOID:2531;4.15e-08;51!DOID:0060083;4.15e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.74e-20,235;DOID:14566,2.89e-18,239;DOID:0050686,2.90e-13,137;DOID:2531,1.44e-12,51;DOID:0060083,1.44e-12,51;DOID:305,1.43e-11,106;DOID:0050687,2.04e-10,143;DOID:1240,3.97e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.03e-08!102;UBERON:0003061!5.03e-08!102 | |ontology_enrichment_uberon=UBERON:0002390!5.03e-08!102;UBERON:0003061!5.03e-08!102 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.26e-08,98;UBERON:0003061,5.26e-08,98 | |||
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| ||
|short_description=p3@SRSF10 | |short_description=p3@SRSF10 | ||
}} | }} |
Latest revision as of 19:09, 16 September 2015
Short description: | p3@SRSF10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SRSF10_5end |
Coexpression cluster: | C3956_Mast_cord_Hodgkin_granulocyte_rhabdomyosarcoma_lymphoma_acute |
Association with transcript: | 4bp_to_ENST00000374453_5end |
EntrezGene: | 100505793,10772 |
HGNC: | 16713 |
UniProt: | Q5JRI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.19e-31 | 168 |
hematopoietic oligopotent progenitor cell | 1.52e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-28 | 161 |
hematopoietic cell | 3.54e-28 | 177 |
hematopoietic lineage restricted progenitor cell | 8.48e-23 | 120 |
nongranular leukocyte | 2.19e-22 | 115 |
leukocyte | 2.20e-22 | 136 |
lymphocyte | 7.70e-19 | 53 |
common lymphoid progenitor | 7.70e-19 | 53 |
lymphoid lineage restricted progenitor cell | 2.80e-18 | 52 |
myeloid cell | 1.70e-11 | 108 |
common myeloid progenitor | 1.70e-11 | 108 |
T cell | 1.08e-09 | 25 |
pro-T cell | 1.08e-09 | 25 |
classical monocyte | 6.67e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.67e-09 | 42 |
lymphocyte of B lineage | 7.29e-09 | 24 |
pro-B cell | 7.29e-09 | 24 |
mature alpha-beta T cell | 6.30e-08 | 18 |
alpha-beta T cell | 6.30e-08 | 18 |
immature T cell | 6.30e-08 | 18 |
mature T cell | 6.30e-08 | 18 |
immature alpha-beta T cell | 6.30e-08 | 18 |
B cell | 1.99e-07 | 14 |
defensive cell | 3.28e-07 | 48 |
phagocyte | 3.28e-07 | 48 |
granulocyte monocyte progenitor cell | 8.03e-07 | 67 |
myeloid lineage restricted progenitor cell | 8.89e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.26e-08 | 98 |
blood island | 5.26e-08 | 98 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.74e-20 | 235 |
disease of cellular proliferation | 2.89e-18 | 239 |
organ system cancer | 2.90e-13 | 137 |
hematologic cancer | 1.44e-12 | 51 |
immune system cancer | 1.44e-12 | 51 |
carcinoma | 1.43e-11 | 106 |
cell type cancer | 2.04e-10 | 143 |
leukemia | 3.97e-10 | 39 |