FFCP PHASE1:Hg19::chr2:128293323..128293332,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4648 | |EntrezGene=4648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7607 | |HGNC=7607 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBZ4,C9J6C0,Q6PIF6 | |UniProt=F8WBZ4,C9J6C0,Q6PIF6 | ||
|association_with_transcript=-45bp_to_ENST00000272666,ENST00000389524,ENST00000428314,NM_001080527,uc002top.2_5end | |association_with_transcript=-45bp_to_ENST00000272666,ENST00000389524,ENST00000428314,NM_001080527,uc002top.2_5end | ||
|cluster_id=chr2:128293323..128293332,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_4_at_MYO7B_5end | |description=CAGE_peak_4_at_MYO7B_5end | ||
|id=chr2:128293323..128293332,+ | |id=chr2:128293323..128293332,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.91e-19;1!UBERON:0001045;5.14e-19;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000160;4.90e-80;17!UBERON:0005409;1.34e-62;22!UBERON:0000059;1.57e-58;11!UBERON:0004921;1.98e-37;33!UBERON:0002108;4.31e-33;4!UBERON:0004907;1.21e-32;5!UBERON:0001155;1.90e-32;9!UBERON:0001154;5.14e-19;1!UBERON:0001153;5.14e-19;1!UBERON:0009854;5.14e-19;1!UBERON:0001052;6.77e-19;4!UBERON:0001555;1.29e-14;54!UBERON:0001007;1.20e-11;81!UBERON:0002114;2.71e-07;2!UBERON:0002110;2.97e-07;3!UBERON:0000922;6.80e-07;49 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.16e-27!27;UBERON:0000059!1.32e-26!11;UBERON:0005409!1.69e-25!35;UBERON:0004907!2.48e-15!5;UBERON:0001155!5.31e-15!9;UBERON:0001154!1.84e-09!1;UBERON:0001153!1.84e-09!1;UBERON:0001301!1.99e-09!1;UBERON:0001052!3.54e-09!4;UBERON:0002108!7.02e-09!14;UBERON:0004921!3.25e-08!129;UBERON:0004185!3.25e-08!129;UBERON:0001007!1.18e-07!155;UBERON:0001555!1.18e-07!155;UBERON:0007026!1.18e-07!155;UBERON:0004119!8.09e-07!169;UBERON:0000925!8.09e-07!169;UBERON:0006595!8.09e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.90e-80;17!UBERON:0005409;1.34e-62;22!UBERON:0000059;1.57e-58;11!UBERON:0004921;1.98e-37;33!UBERON:0002108;4.31e-33;4!UBERON:0004907;1.21e-32;5!UBERON:0001155;1.90e-32;9!UBERON:0001154;5.14e-19;1!UBERON:0001153;5.14e-19;1!UBERON:0009854;5.14e-19;1!UBERON:0001052;6.77e-19;4!UBERON:0001555;1.29e-14;54!UBERON:0001007;1.20e-11;81!UBERON:0002114;2.71e-07;2!UBERON:0002110;2.97e-07;3!UBERON:0000922;6.80e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.90e-80,17;UBERON:0000059,1.57e-58,11;UBERON:0005409,2.38e-55,25;UBERON:0002108,4.31e-33,4;UBERON:0004907,1.28e-32,5;UBERON:0001155,1.90e-32,9;UBERON:0001154,5.62e-19,1;UBERON:0001153,5.62e-19,1;UBERON:0001045,5.62e-19,1;UBERON:0001052,6.77e-19,4;UBERON:0004921,9.84e-12,118;UBERON:0001007,1.01e-11,145;UBERON:0001555,1.01e-11,145;UBERON:0007026,1.01e-11,145;UBERON:0004119,1.45e-10,160;UBERON:0000925,1.45e-10,160;UBERON:0006595,1.45e-10,160;UBERON:0001046,4.29e-09,19;UBERON:0002114,2.63e-07,2;UBERON:0011216,2.80e-07,223;UBERON:0002110,2.97e-07,3;UBERON:0006242,2.97e-07,3 | |||
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|short_description=p4@MYO7B | |short_description=p4@MYO7B | ||
}} | }} |
Latest revision as of 20:47, 16 September 2015
Short description: | p4@MYO7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYO7B_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -45bp_to_ENST00000272666, ENST00000389524, ENST00000428314, NM_001080527, uc002top.2_5end |
EntrezGene: | MYO7B |
HGNC: | 7607 |
UniProt: | F8WBZ4C9J6C0Q6PIF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 4.90e-80 | 17 |
large intestine | 1.57e-58 | 11 |
gastrointestinal system | 2.38e-55 | 25 |
small intestine | 4.31e-33 | 4 |
lower digestive tract | 1.28e-32 | 5 |
colon | 1.90e-32 | 9 |
vermiform appendix | 5.62e-19 | 1 |
caecum | 5.62e-19 | 1 |
midgut | 5.62e-19 | 1 |
rectum | 6.77e-19 | 4 |
subdivision of digestive tract | 9.84e-12 | 118 |
digestive system | 1.01e-11 | 145 |
digestive tract | 1.01e-11 | 145 |
primitive gut | 1.01e-11 | 145 |
endoderm-derived structure | 1.45e-10 | 160 |
endoderm | 1.45e-10 | 160 |
presumptive endoderm | 1.45e-10 | 160 |
hindgut | 4.29e-09 | 19 |
duodenum | 2.63e-07 | 2 |
organ system subdivision | 2.80e-07 | 223 |
gallbladder | 2.97e-07 | 3 |
gall bladder primordium | 2.97e-07 | 3 |