FFCP PHASE1:Hg19::chr4:17578833..17578843,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:17578833..17578843,+
|short_description=p6@LAP3
|description=CAGE_peak_6_at_LAP3_5end
|association_with_transcript=18bp_to_ENST00000226299_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51056 | |EntrezGene=51056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18449 | |HGNC=18449 | ||
|TSSclassifier=strong | |||
|UniProt=P28838 | |UniProt=P28838 | ||
|association_with_transcript=18bp_to_ENST00000226299_5end | |||
|cluster_id=chr4:17578833..17578843,+ | |||
|description=CAGE_peak_6_at_LAP3_5end | |||
|id=chr4:17578833..17578843,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;1.66e-15;1!CL:0000624;2.09e-10;6!CL:0002262;2.07e-08;2!CL:1000398;2.07e-08;2!CL:0002593;2.07e-08;2!CL:0000791;1.12e-07;18!CL:0000789;1.12e-07;18!CL:0002419;1.12e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.41e-10,6;CL:0002262,2.00e-08,2;CL:1000398,2.00e-08,2;CL:0002593,2.87e-08,2;CL:0000791,1.11e-07,18;CL:0000789,1.11e-07,18;CL:0002420,1.11e-07,18;CL:0002419,1.11e-07,18;CL:0000790,1.11e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.66e-15;1!CL:0000790;1.12e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.66e-15;1!UBERON:0001785;1.66e-15;1!UBERON:0002464;1.66e-15;1!UBERON:0004904;1.66e-15;1!UBERON:0001021;1.66e-15;1!UBERON:0003513;4.75e-09;7!UBERON:0003714;2.07e-08;2!UBERON:0001281;2.07e-08;2!UBERON:0005162;2.07e-08;2!UBERON:0000122;2.07e-08;2!UBERON:0003497;2.07e-08;2!UBERON:0003909;2.07e-08;2!UBERON:0003835;2.07e-08;2!UBERON:0002456;2.07e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.34e-15,1;UBERON:0001785,1.34e-15,1;UBERON:0002464,1.34e-15,1;UBERON:0004904,1.34e-15,1;UBERON:0001021,1.34e-15,1;UBERON:0003902,1.34e-15,1;UBERON:0005425,1.34e-15,1;UBERON:0003513,5.59e-09,7;UBERON:0003714,1.86e-08,2;UBERON:0005162,1.86e-08,2;UBERON:0000122,1.86e-08,2;UBERON:0001281,2.00e-08,2;UBERON:0003497,2.00e-08,2;UBERON:0003909,2.00e-08,2;UBERON:0003835,2.00e-08,2;UBERON:0002456,2.87e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0.125542639594803,0.382067028739756,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0,0,0.154934401160603,0.142169232487422,0,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,1.43846196161075,1.0246428261164,0.709446689665756,0,0,0,0,0,0,0,0.320929027076094,0,0.989553900560148,0.797854630486527,0.426224750532694,0,0,0,2.26123798731069,3.12889751052121,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,1.37696839079683,1.17903228824749,0.411202997999018,0,0.651844533267181,0.473447805734733,1.94826728407911,0,0,0,0,0.128091319725675,0,0.328875809207352,0,0,0,0.267540828089713,0,0,0,0.68725489096526,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0.403213486449465,1.60464117470104,0.724122019413995,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0.443458794925128,0.087834785693126,0.261958150995425,0,0.370784442784429,0,0,0,0.715471872916026,0,0.371457501329565,0.39752481473341,0,0,0,0,0,0.417989933073621,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0,0,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0,0.311211035399766,0,0.653847612453835,0.302714855289863,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0.300091096084402,0.206105058476878,0,0,0,0,0.252433774244115,0,0,0,0.302256294682921,0,0,0,0.286804595389004,0.243947412259191,0.927708378250397,0.232387885739037,0.310983165046111,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0.241011029883482,0,0.653638332277218,0.237270619111097,0,0.196221465125346,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0.190254152234598,0.790204397959275,0,0,0.234004265139238,0,0.93733833986777,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0.112085143993527,0.591092280605782,0.215627574859517,0.256686072559497,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0.343143423810856,0.206768026122887,0,0.320182673410333,0,0,0.604780586659361,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0.355123450626254,0.246381468041427,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0,0,0.261435451024901,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0.41254749960294,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0.165284915360978,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0.213425530045242,0.159426272728822,0,0,0,0,0,0,0.313359791546046,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0.278406173895242,0,0,0.33307196799782,0,0,0,0.242721043499027,0.222886768554957,0,0,0,0,0,0.562677665642051,0.333926115068718,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0.123084805461069,0.622079175323615,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0.236387681767936,0.689486746482929,0.583209226766509,0.173624994933292,0,0.241192877250816,0,0.442317039724898,0,0.219385397153973,0.10893846351899,0,0,0.113942055847001,0.23056390438806,0,0.217294743844016,0,0,0,0,0,0.332423363800313,0.225595660617181,0.19606253431774,0.503464760927528,0.189753732724185,0,0.210998064528027,0,0.282706142867882,0.216388639742091,0,0,0,0,0,0,0,0,0.937057782901357,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0.30607276163049,0,0.901940516486955,0.207376382794494,0,0,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0,0,0.17472666824203,0,0.290268993867255,0.219267951258557,0,0,0.176512253383001,0,0,0,0.126621591911757,0.586654148204409,0.0801588202515337,0,0.19980960958213,0,0,0.171594997861965,0.576219191952599,0,0,0.135904206073614,0.104602846312333,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.393915911536118,0.741742725430498,0.943649613958588,0.196854963029498,0.0846733320657845,0,0.136203406111576,0.160753148465019,0.137539436597234,0.83088067605837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| ||
|short_description=p6@LAP3 | |||
}} | }} |
Latest revision as of 21:07, 16 September 2015
Short description: | p6@LAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LAP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000226299_5end |
EntrezGene: | LAP3 |
HGNC: | 18449 |
UniProt: | P28838 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.41e-10 | 6 |
endothelial cell of sinusoid | 2.00e-08 | 2 |
endothelial cell of hepatic sinusoid | 2.00e-08 | 2 |
smooth muscle cell of the internal thoracic artery | 2.87e-08 | 2 |
mature alpha-beta T cell | 1.11e-07 | 18 |
alpha-beta T cell | 1.11e-07 | 18 |
immature T cell | 1.11e-07 | 18 |
mature T cell | 1.11e-07 | 18 |
immature alpha-beta T cell | 1.11e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.34e-15 | 1 |
cranial nerve | 1.34e-15 | 1 |
nerve trunk | 1.34e-15 | 1 |
nerve connecting eye with brain | 1.34e-15 | 1 |
nerve | 1.34e-15 | 1 |
retinal neural layer | 1.34e-15 | 1 |
presumptive neural retina | 1.34e-15 | 1 |
trunk blood vessel | 5.59e-09 | 7 |
neural tissue | 1.86e-08 | 2 |
multi cell component structure | 1.86e-08 | 2 |
neuron projection bundle | 1.86e-08 | 2 |
hepatic sinusoid | 2.00e-08 | 2 |
abdomen blood vessel | 2.00e-08 | 2 |
sinusoid | 2.00e-08 | 2 |
abdominal segment blood vessel | 2.00e-08 | 2 |
internal thoracic artery | 2.87e-08 | 2 |