FFCP PHASE1:Hg19::chr7:142494645..142494659,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=12172 | |HGNC=12172 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000390416,uc003wbj.3_5end | |association_with_transcript=-22bp_to_ENST00000390416,uc003wbj.3_5end | ||
|cluster_id=chr7:142494645..142494659,+ | |||
|coexpression_cluster_id=C861 | |coexpression_cluster_id=C861 | ||
|description=CAGE_peak_2_at_TRBJ2-4_5end | |description=CAGE_peak_2_at_TRBJ2-4_5end | ||
|id=chr7:142494645..142494659,+ | |id=chr7:142494645..142494659,+ | ||
|ontology_enrichment_celltype=CL:0000236;3.55e-36;13!CL:0000542;1.71e-34;53!CL:0000084;3.07e-28;25!CL:0000791;5.55e-27;18!CL:0000789;5.55e-27;18!CL:0002419;5.55e-27;18!CL:0000945;2.98e-21;24!CL:0000624;2.84e-13;6!CL:0000625;3.21e-13;11!CL:0000898;7.96e-11;3!CL:0000623;4.40e-10;3!CL:0002087;1.82e-08;104!CL:0000815;1.07e-07;2!CL:0000792;1.07e-07;2!CL:0002677;1.07e-07;2 | |ontology_enrichment_celltype=CL:0000542!2.65e-44!53;CL:0000051!2.65e-44!53;CL:0000838!5.43e-43!52;CL:0000084!1.19e-24!25;CL:0000827!1.19e-24!25;CL:0000791!3.90e-22!18;CL:0000789!3.90e-22!18;CL:0002420!3.90e-22!18;CL:0002419!3.90e-22!18;CL:0000790!3.90e-22!18;CL:0002087!2.23e-18!119;CL:0000236!1.83e-17!14;CL:0000945!5.44e-16!24;CL:0000826!5.44e-16!24;CL:0000738!1.17e-14!140;CL:0000625!1.31e-13!11;CL:0002031!2.19e-13!124;CL:0000037!4.13e-13!172;CL:0000566!4.13e-13!172;CL:0000988!1.31e-12!182;CL:0002032!1.36e-11!165;CL:0000837!1.36e-11!165;CL:0000624!5.89e-09!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0000236;3.55e-36;13!CL:0000542;1.71e-34;53!CL:0000084;3.07e-28;25!CL:0000791;5.55e-27;18!CL:0000789;5.55e-27;18!CL:0002419;5.55e-27;18!CL:0000945;2.98e-21;24!CL:0000624;2.84e-13;6!CL:0000625;3.21e-13;11!CL:0000898;7.96e-11;3!CL:0000623;4.40e-10;3!CL:0002087;1.82e-08;104!CL:0000815;1.07e-07;2!CL:0000792;1.07e-07;2!CL:0002677;1.07e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.13e-58,53;CL:0000051,2.13e-58,53;CL:0000838,8.94e-56,52;CL:0000236,6.72e-39,14;CL:0000084,4.99e-28,25;CL:0000827,4.99e-28,25;CL:0000791,6.19e-27,18;CL:0000789,6.19e-27,18;CL:0002420,6.19e-27,18;CL:0002419,6.19e-27,18;CL:0000790,6.19e-27,18;CL:0002087,3.52e-25,115;CL:0000945,2.60e-21,24;CL:0000826,2.60e-21,24;CL:0000738,6.14e-20,136;CL:0002031,3.98e-19,120;CL:0000037,1.45e-15,168;CL:0002032,2.35e-14,161;CL:0000837,2.35e-14,161;CL:0000988,2.51e-14,177;CL:0000624,2.14e-13,6;CL:0000625,3.59e-13,11;CL:0000898,7.23e-11,3;CL:0000623,5.67e-10,3;CL:0000825,5.67e-10,3;CL:0000815,8.36e-08,2;CL:0000792,8.36e-08,2;CL:0002677,8.36e-08,2;CL:0000893,1.72e-07,2;CL:0002489,1.72e-07,2;CL:0000785,1.72e-07,2;CL:0000955,1.72e-07,2;CL:0000809,1.72e-07,2;CL:0000818,1.72e-07,2;CL:0000808,1.72e-07,2;CL:0000894,1.72e-07,2;CL:0000806,1.72e-07,2;CL:0000807,1.72e-07,2;CL:0000805,1.72e-07,2;CL:0000954,1.72e-07,2;CL:0000816,1.72e-07,2;CL:0002425,1.72e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.71e-34;53!CL:0000790;5.55e-27;18!CL:0002425;1.07e-07;2!CL:0000954;2.19e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002370;1.07e-07;2!UBERON:0005058;1.07e-07;2!UBERON:0009113;1.07e-07;2!UBERON:0000178;6.02e-07;15!UBERON:0000179;6.02e-07;15!UBERON:0000463;6.02e-07;15 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.26e-10!15;UBERON:0000179!1.26e-10!15;UBERON:0000463!1.26e-10!15;UBERON:0004177!7.11e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.07e-07;2!UBERON:0005058;1.07e-07;2!UBERON:0009113;1.07e-07;2!UBERON:0000178;6.02e-07;15!UBERON:0000179;6.02e-07;15!UBERON:0000463;6.02e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.90e-13,4;UBERON:0005058,1.90e-13,4;UBERON:0009113,1.90e-13,4;UBERON:0003295,1.90e-13,4;UBERON:0005562,1.90e-13,4;UBERON:0003351,5.70e-09,6;UBERON:0004177,1.09e-07,7;UBERON:0005057,1.09e-07,7;UBERON:0000178,7.04e-07,15;UBERON:0000179,7.04e-07,15;UBERON:0000463,7.04e-07,15 | |||
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|short_description=p2@TRBJ2-4 | |short_description=p2@TRBJ2-4 | ||
}} | }} |
Latest revision as of 21:34, 16 September 2015
Short description: | p2@TRBJ2-4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRBJ2-4_5end |
Coexpression cluster: | C861_CD19_chronic_NK_Natural_lymphangiectasia_acute_CD8 |
Association with transcript: | -22bp_to_ENST00000390416, uc003wbj.3_5end |
EntrezGene: | NA |
HGNC: | 12172 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.90e-13 | 4 |
hemolymphoid system gland | 1.90e-13 | 4 |
thymic region | 1.90e-13 | 4 |
pharyngeal gland | 1.90e-13 | 4 |
thymus primordium | 1.90e-13 | 4 |
pharyngeal epithelium | 5.70e-09 | 6 |
hemopoietic organ | 1.09e-07 | 7 |
immune organ | 1.09e-07 | 7 |
blood | 7.04e-07 | 15 |
haemolymphatic fluid | 7.04e-07 | 15 |
organism substance | 7.04e-07 | 15 |