FFCP PHASE1:Hg19::chr7:142552362..142552374,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:142552362..142552374,+
|short_description=p7@EPHB6
|description=CAGE_peak_7_at_EPHB6_5end
|association_with_transcript=-417bp_to_ENST00000392957,NM_004445,...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2051 | |EntrezGene=2051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3396 | |HGNC=3396 | ||
|TSSclassifier=strong | |||
|UniProt=O15197 | |UniProt=O15197 | ||
|association_with_transcript=-417bp_to_ENST00000392957,NM_004445,uc003wbs.2,uc010lot.1,uc011kst.1,uc011ksu.1_5end | |||
|cluster_id=chr7:142552362..142552374,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_7_at_EPHB6_5end | |||
|id=chr7:142552362..142552374,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.95e-11;82!UBERON:0006222;2.71e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!3.97e-52!34;UBERON:0001869!9.81e-52!32;UBERON:0002791!1.53e-49!33;UBERON:0002780!1.61e-49!41;UBERON:0001890!1.61e-49!41;UBERON:0006240!1.61e-49!41;UBERON:0003080!3.54e-48!42;UBERON:0002020!2.63e-44!34;UBERON:0003528!2.63e-44!34;UBERON:0001017!3.06e-44!82;UBERON:0002619!1.18e-43!22;UBERON:0001950!1.26e-43!20;UBERON:0005743!9.76e-42!86;UBERON:0001049!1.48e-41!57;UBERON:0005068!1.48e-41!57;UBERON:0006241!1.48e-41!57;UBERON:0007135!1.48e-41!57;UBERON:0000955!4.41e-40!69;UBERON:0006238!4.41e-40!69;UBERON:0002616!7.10e-40!59;UBERON:0000073!6.21e-39!94;UBERON:0001016!6.21e-39!94;UBERON:0003056!2.18e-38!61;UBERON:0000956!5.54e-38!25;UBERON:0000203!5.54e-38!25;UBERON:0003075!1.24e-34!86;UBERON:0007284!1.24e-34!86;UBERON:0002346!1.14e-32!90;UBERON:0000153!4.15e-29!129;UBERON:0007811!4.15e-29!129;UBERON:0000033!5.70e-26!123;UBERON:0004121!5.28e-22!169;UBERON:0000924!3.04e-21!173;UBERON:0006601!3.04e-21!173;UBERON:0007023!8.94e-21!115;UBERON:0000200!6.17e-18!6;UBERON:0001872!6.51e-16!5;UBERON:0001871!2.96e-13!7;UBERON:0000369!8.56e-13!4;UBERON:0002435!8.56e-13!4;UBERON:0000204!8.56e-13!4;UBERON:0010082!8.56e-13!4;UBERON:0002420!1.38e-11!9;UBERON:0007245!1.38e-11!9;UBERON:0010009!1.38e-11!9;UBERON:0010011!1.38e-11!9;UBERON:0000454!1.38e-11!9;UBERON:0009663!9.04e-11!7;UBERON:0002021!2.18e-10!5;UBERON:0005383!6.69e-10!3;UBERON:0005382!6.69e-10!3;UBERON:0002771!1.01e-09!3;UBERON:0002308!2.79e-08!9;UBERON:0000125!2.79e-08!9;UBERON:0000025!4.86e-08!194;UBERON:0000064!2.15e-07!219;UBERON:0001873!3.71e-07!2;UBERON:0010122!3.71e-07!2;UBERON:0001870!4.57e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.88e-67;20!UBERON:0001869;6.89e-66;32!UBERON:0001893;9.50e-62;34!UBERON:0002619;4.89e-61;22!UBERON:0002791;1.50e-57;32!UBERON:0003528;1.60e-54;34!UBERON:0002020;1.60e-54;34!UBERON:0000956;9.15e-54;25!UBERON:0000203;9.15e-54;25!UBERON:0002780;4.86e-40;41!UBERON:0001890;4.86e-40;41!UBERON:0001872;1.90e-28;5!UBERON:0002021;7.71e-28;5!UBERON:0000073;8.34e-26;53!UBERON:0002616;8.34e-26;53!UBERON:0000955;1.71e-22;68!UBERON:0001017;7.52e-21;75!UBERON:0000369;1.60e-20;4!UBERON:0002435;1.60e-20;4!UBERON:0000204;1.60e-20;4!UBERON:0001016;3.70e-16;83!UBERON:0000200;1.31e-13;6!UBERON:0005383;9.64e-13;3!UBERON:0005382;9.64e-13;3!UBERON:0009663;5.61e-12;7!UBERON:0001871;1.38e-11;6!UBERON:0002581;2.71e-10;1!UBERON:0002902;2.71e-10;1!UBERON:0001882;2.71e-10;1!UBERON:0009899;2.71e-10;1!UBERON:0005403;2.71e-10;1!UBERON:0002022;6.61e-10;1!UBERON:0001874;6.61e-10;1!UBERON:0007190;6.61e-10;1!UBERON:0002420;1.98e-09;9!UBERON:0000125;1.98e-09;9!UBERON:0007245;1.98e-09;9!UBERON:0002308;1.98e-09;9!UBERON:0010009;1.98e-09;9!UBERON:0010011;1.98e-09;9!UBERON:0000454;1.98e-09;9!UBERON:0007023;1.01e-07;114!UBERON:0011216;2.37e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.61e-73,32;UBERON:0001893,1.75e-68,34;UBERON:0001950,2.24e-67,20;UBERON:0002791,1.74e-64,32;UBERON:0002780,8.31e-64,41;UBERON:0001890,8.31e-64,41;UBERON:0003080,8.31e-64,41;UBERON:0006240,8.31e-64,41;UBERON:0002619,2.40e-61,22;UBERON:0003528,1.17e-60,34;UBERON:0002020,1.17e-60,34;UBERON:0000956,4.89e-54,25;UBERON:0000203,4.89e-54,25;UBERON:0000073,5.16e-49,53;UBERON:0002616,5.16e-49,53;UBERON:0000955,2.19e-46,68;UBERON:0006238,2.19e-46,68;UBERON:0001049,2.75e-46,56;UBERON:0005068,2.75e-46,56;UBERON:0006241,2.75e-46,56;UBERON:0007135,2.75e-46,56;UBERON:0001017,7.18e-43,81;UBERON:0003056,2.50e-42,61;UBERON:0001016,2.24e-38,89;UBERON:0003075,6.77e-31,82;UBERON:0007284,6.77e-31,82;UBERON:0002346,2.42e-29,86;UBERON:0001872,1.44e-28,5;UBERON:0002021,6.28e-28,5;UBERON:0010371,8.21e-24,104;UBERON:0000369,2.39e-20,4;UBERON:0002435,2.39e-20,4;UBERON:0000204,2.39e-20,4;UBERON:0010082,2.39e-20,4;UBERON:0004121,8.56e-19,171;UBERON:0000924,8.56e-19,171;UBERON:0006601,8.56e-19,171;UBERON:0010314,3.56e-18,132;UBERON:0007023,8.92e-17,114;UBERON:0011216,2.77e-15,223;UBERON:0000200,1.81e-13,6;UBERON:0000025,3.98e-13,192;UBERON:0005383,1.26e-12,3;UBERON:0005382,1.26e-12,3;UBERON:0009663,7.02e-12,7;UBERON:0001871,9.43e-12,6;UBERON:0002902,2.84e-10,1;UBERON:0009899,2.84e-10,1;UBERON:0001882,3.10e-10,1;UBERON:0005403,3.10e-10,1;UBERON:0002581,3.40e-10,1;UBERON:0002022,6.91e-10,1;UBERON:0004111,7.13e-10,240;UBERON:0001874,9.82e-10,1;UBERON:0007190,1.07e-09,1;UBERON:0002420,2.35e-09,9;UBERON:0000125,2.35e-09,9;UBERON:0007245,2.35e-09,9;UBERON:0002308,2.35e-09,9;UBERON:0010009,2.35e-09,9;UBERON:0010011,2.35e-09,9;UBERON:0000454,2.35e-09,9;UBERON:0000483,4.79e-07,306;UBERON:0000119,6.03e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,1.84267891867784,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497992903438899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.29875337426592,3.99227596002388,0,0,0,0,0,0,0,0,0,3.54296554325536,0.482385754501632,0,0.331737779793674,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,2.34264445725339,0,0,0,0,0,1.83643656978294,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,1.51945910294109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,1.57948847310864,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.58634144372552,0.625954653532499,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,2.18379365327962,0,1.59633859057151,1.8460472781668,1.51243017733031,2.21303207885497,0.968853873791107,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,1.35075169236789,2.34323429584154,2.48024155801421,0.887821342714695,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,2.10472875401117,0,0,0,1.41404030924402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90376172534561,3.05445483238264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0.23806443146374,0.839655827868079,0.620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,1.84267891867784,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.497992903438899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,1.29875337426592,3.99227596002388,0,0,0,0,0,0,0,0,0,3.54296554325536,0.482385754501632,0,0.331737779793674,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,2.34264445725339,0,0,0,0,0,1.83643656978294,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,1.51945910294109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,1.57948847310864,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.58634144372552,0.625954653532499,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,2.18379365327962,0,1.59633859057151,1.8460472781668,1.51243017733031,2.21303207885497,0.968853873791107,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,1.35075169236789,2.34323429584154,2.48024155801421,0.887821342714695,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,2.10472875401117,0,0,0,1.41404030924402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90376172534561,3.05445483238264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0.23806443146374,0.839655827868079,0.620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p7@EPHB6 | |||
}} | }} |
Latest revision as of 22:25, 16 September 2015
Short description: | p7@EPHB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EPHB6_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -417bp_to_ENST00000392957, NM_004445, uc003wbs.2, uc010lot.1, uc011kst.1, uc011ksu.1_5end |
EntrezGene: | EPHB6 |
HGNC: | 3396 |
UniProt: | O15197 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data