FFCP PHASE1:Hg19::chr7:142552394..142552413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2051 | |EntrezGene=2051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3396 | |HGNC=3396 | ||
|TSSclassifier=strong | |||
|UniProt=O15197 | |UniProt=O15197 | ||
|association_with_transcript=-378bp_to_ENST00000392957,NM_004445,uc003wbs.2,uc010lot.1,uc011kst.1,uc011ksu.1_5end | |association_with_transcript=-378bp_to_ENST00000392957,NM_004445,uc003wbs.2,uc010lot.1,uc011kst.1,uc011ksu.1_5end | ||
|cluster_id=chr7:142552394..142552413,+ | |||
|coexpression_cluster_id=C4662 | |coexpression_cluster_id=C4662 | ||
|description=CAGE_peak_3_at_EPHB6_5end | |description=CAGE_peak_3_at_EPHB6_5end | ||
|id=chr7:142552394..142552413,+ | |id=chr7:142552394..142552413,+ | ||
|ontology_enrichment_celltype=CL:0000838!4.11e-14!52;CL:0000988!5.51e-14!182;CL:0000542!1.14e-13!53;CL:0000051!1.14e-13!53;CL:0000037!1.47e-12!172;CL:0000566!1.47e-12!172;CL:0000084!4.15e-12!25;CL:0000827!4.15e-12!25;CL:0002087!8.05e-12!119;CL:0002032!4.44e-11!165;CL:0000837!4.44e-11!165;CL:0002031!1.67e-09!124;CL:0000738!9.87e-09!140;CL:0000791!1.97e-07!18;CL:0000789!1.97e-07!18;CL:0002420!1.97e-07!18;CL:0002419!1.97e-07!18;CL:0000790!1.97e-07!18 | |ontology_enrichment_celltype=CL:0000838!4.11e-14!52;CL:0000988!5.51e-14!182;CL:0000542!1.14e-13!53;CL:0000051!1.14e-13!53;CL:0000037!1.47e-12!172;CL:0000566!1.47e-12!172;CL:0000084!4.15e-12!25;CL:0000827!4.15e-12!25;CL:0002087!8.05e-12!119;CL:0002032!4.44e-11!165;CL:0000837!4.44e-11!165;CL:0002031!1.67e-09!124;CL:0000738!9.87e-09!140;CL:0000791!1.97e-07!18;CL:0000789!1.97e-07!18;CL:0002420!1.97e-07!18;CL:0002419!1.97e-07!18;CL:0000790!1.97e-07!18 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.88e-08;2!UBERON:0006601;6.98e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.96e-34!32;UBERON:0001893!2.09e-33!34;UBERON:0002791!4.29e-32!33;UBERON:0002020!6.00e-31!34;UBERON:0003528!6.00e-31!34;UBERON:0002780!4.04e-30!41;UBERON:0001890!4.04e-30!41;UBERON:0006240!4.04e-30!41;UBERON:0003080!4.02e-29!42;UBERON:0002619!3.30e-27!22;UBERON:0001950!5.11e-25!20;UBERON:0000956!5.74e-25!25;UBERON:0000203!5.74e-25!25;UBERON:0001049!1.77e-24!57;UBERON:0005068!1.77e-24!57;UBERON:0006241!1.77e-24!57;UBERON:0007135!1.77e-24!57;UBERON:0003056!2.31e-23!61;UBERON:0001017!3.08e-23!82;UBERON:0002616!3.23e-23!59;UBERON:0005743!2.14e-22!86;UBERON:0000955!1.07e-21!69;UBERON:0006238!1.07e-21!69;UBERON:0003075!3.93e-19!86;UBERON:0007284!3.93e-19!86;UBERON:0000073!8.05e-19!94;UBERON:0001016!8.05e-19!94;UBERON:0002346!1.23e-17!90;UBERON:0000153!1.40e-14!129;UBERON:0007811!1.40e-14!129;UBERON:0000033!1.29e-12!123;UBERON:0007023!1.37e-11!115;UBERON:0002420!3.84e-10!9;UBERON:0007245!3.84e-10!9;UBERON:0010009!3.84e-10!9;UBERON:0010011!3.84e-10!9;UBERON:0000454!3.84e-10!9;UBERON:0000200!1.77e-09!6;UBERON:0001871!1.47e-08!7;UBERON:0004121!1.81e-08!169;UBERON:0009663!4.73e-08!7;UBERON:0002021!4.78e-08!5;UBERON:0000924!5.92e-08!173;UBERON:0006601!5.92e-08!173;UBERON:0001872!5.96e-08!5;UBERON:0002308!1.72e-07!9;UBERON:0000125!1.72e-07!9;UBERON:0000349!3.22e-07!5;UBERON:0000369!4.00e-07!4;UBERON:0002435!4.00e-07!4;UBERON:0000204!4.00e-07!4;UBERON:0010082!4.00e-07!4 | |ontology_enrichment_uberon=UBERON:0001869!2.96e-34!32;UBERON:0001893!2.09e-33!34;UBERON:0002791!4.29e-32!33;UBERON:0002020!6.00e-31!34;UBERON:0003528!6.00e-31!34;UBERON:0002780!4.04e-30!41;UBERON:0001890!4.04e-30!41;UBERON:0006240!4.04e-30!41;UBERON:0003080!4.02e-29!42;UBERON:0002619!3.30e-27!22;UBERON:0001950!5.11e-25!20;UBERON:0000956!5.74e-25!25;UBERON:0000203!5.74e-25!25;UBERON:0001049!1.77e-24!57;UBERON:0005068!1.77e-24!57;UBERON:0006241!1.77e-24!57;UBERON:0007135!1.77e-24!57;UBERON:0003056!2.31e-23!61;UBERON:0001017!3.08e-23!82;UBERON:0002616!3.23e-23!59;UBERON:0005743!2.14e-22!86;UBERON:0000955!1.07e-21!69;UBERON:0006238!1.07e-21!69;UBERON:0003075!3.93e-19!86;UBERON:0007284!3.93e-19!86;UBERON:0000073!8.05e-19!94;UBERON:0001016!8.05e-19!94;UBERON:0002346!1.23e-17!90;UBERON:0000153!1.40e-14!129;UBERON:0007811!1.40e-14!129;UBERON:0000033!1.29e-12!123;UBERON:0007023!1.37e-11!115;UBERON:0002420!3.84e-10!9;UBERON:0007245!3.84e-10!9;UBERON:0010009!3.84e-10!9;UBERON:0010011!3.84e-10!9;UBERON:0000454!3.84e-10!9;UBERON:0000200!1.77e-09!6;UBERON:0001871!1.47e-08!7;UBERON:0004121!1.81e-08!169;UBERON:0009663!4.73e-08!7;UBERON:0002021!4.78e-08!5;UBERON:0000924!5.92e-08!173;UBERON:0006601!5.92e-08!173;UBERON:0001872!5.96e-08!5;UBERON:0002308!1.72e-07!9;UBERON:0000125!1.72e-07!9;UBERON:0000349!3.22e-07!5;UBERON:0000369!4.00e-07!4;UBERON:0002435!4.00e-07!4;UBERON:0000204!4.00e-07!4;UBERON:0010082!4.00e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.20e-63;32!UBERON:0002791;3.49e-59;32!UBERON:0001893;3.04e-57;34!UBERON:0002619;5.22e-57;22!UBERON:0003528;1.01e-53;34!UBERON:0002020;1.01e-53;34!UBERON:0001950;8.37e-52;20!UBERON:0000956;9.35e-50;25!UBERON:0000203;9.35e-50;25!UBERON:0002780;5.58e-46;41!UBERON:0001890;5.58e-46;41!UBERON:0000073;5.83e-26;53!UBERON:0002616;5.83e-26;53!UBERON:0000955;3.20e-21;68!UBERON:0000200;4.81e-20;6!UBERON:0001017;1.35e-19;75!UBERON:0002420;1.52e-17;9!UBERON:0007245;1.52e-17;9!UBERON:0010009;1.52e-17;9!UBERON:0010011;1.52e-17;9!UBERON:0000454;1.52e-17;9!UBERON:0009663;2.42e-17;7!UBERON:0002021;9.71e-17;5!UBERON:0001872;2.62e-16;5!UBERON:0000369;1.53e-14;4!UBERON:0002435;1.53e-14;4!UBERON:0000204;1.53e-14;4!UBERON:0001016;8.64e-14;83!UBERON:0000125;2.59e-13;9!UBERON:0002308;2.59e-13;9!UBERON:0005383;2.20e-11;3!UBERON:0005382;2.20e-11;3!UBERON:0001871;3.42e-11;6!UBERON:0001870;6.80e-11;3!UBERON:0000349;5.33e-10;5!UBERON:0002370;3.69e-08;2!UBERON:0005058;3.69e-08;2!UBERON:0009113;3.69e-08;2!UBERON:0001873;3.88e-08;2!UBERON:0002702;4.92e-08;2!UBERON:0007023;4.97e-08;114!UBERON:0002771;1.28e-07;2!UBERON:0001875;1.54e-07;2!UBERON:0006514;1.54e-07;2!UBERON:0001954;9.04e-07;2!UBERON:0003022;9.04e-07;2!UBERON:0002421;9.04e-07;2!UBERON:0002600;9.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.19e-71,32;UBERON:0001893,1.06e-66,34;UBERON:0002791,7.51e-66,32;UBERON:0002780,6.61e-63,41;UBERON:0001890,6.61e-63,41;UBERON:0003080,6.61e-63,41;UBERON:0006240,6.61e-63,41;UBERON:0003528,1.19e-61,34;UBERON:0002020,1.19e-61,34;UBERON:0002619,5.13e-57,22;UBERON:0001950,7.12e-52,20;UBERON:0000956,9.21e-50,25;UBERON:0000203,9.21e-50,25;UBERON:0000073,4.58e-47,53;UBERON:0002616,4.58e-47,53;UBERON:0001049,3.77e-44,56;UBERON:0005068,3.77e-44,56;UBERON:0006241,3.77e-44,56;UBERON:0007135,3.77e-44,56;UBERON:0003056,1.12e-42,61;UBERON:0000955,1.58e-42,68;UBERON:0006238,1.58e-42,68;UBERON:0001017,8.94e-42,81;UBERON:0001016,9.59e-37,89;UBERON:0003075,9.82e-30,82;UBERON:0007284,9.82e-30,82;UBERON:0002346,5.56e-28,86;UBERON:0010371,9.22e-22,104;UBERON:0007023,3.54e-21,114;UBERON:0000200,5.32e-20,6;UBERON:0002420,1.71e-17,9;UBERON:0007245,1.71e-17,9;UBERON:0010009,1.71e-17,9;UBERON:0010011,1.71e-17,9;UBERON:0000454,1.71e-17,9;UBERON:0009663,2.46e-17,7;UBERON:0010314,9.33e-17,132;UBERON:0002021,1.14e-16,5;UBERON:0001872,1.91e-16,5;UBERON:0004121,4.59e-16,171;UBERON:0000924,4.59e-16,171;UBERON:0006601,4.59e-16,171;UBERON:0000369,1.59e-14,4;UBERON:0002435,1.59e-14,4;UBERON:0000204,1.59e-14,4;UBERON:0010082,1.59e-14,4;UBERON:0000125,2.63e-13,9;UBERON:0002308,2.63e-13,9;UBERON:0011216,5.42e-13,223;UBERON:0005383,2.28e-11,3;UBERON:0005382,2.28e-11,3;UBERON:0001871,3.14e-11,6;UBERON:0001870,6.82e-11,3;UBERON:0000349,6.64e-10,5;UBERON:0000025,2.42e-08,192;UBERON:0001873,4.02e-08,2;UBERON:0010122,4.02e-08,2;UBERON:0002702,5.09e-08,2;UBERON:0002771,1.37e-07,2;UBERON:0001875,1.51e-07,2;UBERON:0006514,1.51e-07,2 | |||
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|short_description=p3@EPHB6 | |short_description=p3@EPHB6 | ||
}} | }} |
Latest revision as of 22:25, 16 September 2015
Short description: | p3@EPHB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EPHB6_5end |
Coexpression cluster: | C4662_caudate_thymus_acute_putamen_occipital_globus_nucleus |
Association with transcript: | -378bp_to_ENST00000392957, NM_004445, uc003wbs.2, uc010lot.1, uc011kst.1, uc011ksu.1_5end |
EntrezGene: | EPHB6 |
HGNC: | 3396 |
UniProt: | O15197 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data