FFCP PHASE1:Hg19::chr7:142640966..142640992,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3792 | |EntrezGene=3792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6308 | |HGNC=6308 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-40bp_to_ENST00000470850_5end | |association_with_transcript=-40bp_to_ENST00000470850_5end | ||
|cluster_id=chr7:142640966..142640992,- | |||
|coexpression_cluster_id=C87 | |coexpression_cluster_id=C87 | ||
|description=CAGE_peak_2_at_KEL_5end | |description=CAGE_peak_2_at_KEL_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000243;8.22e-07;15!CL:0000125;8.22e-07;15 | |ontology_enrichment_celltype_v019=CL:0000243;8.22e-07;15!CL:0000125;8.22e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000243,8.11e-07,15;CL:0000125,8.11e-07,15;CL:0000030,8.11e-07,15;CL:0000339,8.11e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.15e-26;1!UBERON:0006238;4.94e-10;10!UBERON:0003056;1.01e-09;3!CL:0000339;8.22e-07;15 | |ontology_enrichment_development_v019=UBERON:0009143;3.15e-26;1!UBERON:0006238;4.94e-10;10!UBERON:0003056;1.01e-09;3!CL:0000339;8.22e-07;15 | ||
|ontology_enrichment_disease=DOID:3151!3.32e-07!1;DOID:3149!3.32e-07!1 | |ontology_enrichment_disease=DOID:3151!3.32e-07!1;DOID:3149!3.32e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3151;3.15e-26;1!DOID:3149;3.15e-26;1!DOID:3451;7.77e-14;2!DOID:4159;7.77e-14;2!DOID:0060122;7.77e-14;2!DOID:3093;2.83e-09;11 | |ontology_enrichment_disease_v019=DOID:3151;3.15e-26;1!DOID:3149;3.15e-26;1!DOID:3451;7.77e-14;2!DOID:4159;7.77e-14;2!DOID:0060122;7.77e-14;2!DOID:3093;2.83e-09;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,3.58e-26,1;DOID:3149,3.58e-26,1;DOID:3451,8.28e-14,2;DOID:4159,8.28e-14,2;DOID:0060122,8.28e-14,2;DOID:3093,2.77e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0001042!1.96e-19!10;UBERON:0009145!1.96e-19!10;UBERON:0006562!1.28e-17!11;UBERON:0001723!1.79e-17!3;UBERON:0001033!1.79e-17!3;UBERON:0010056!1.79e-17!3;UBERON:0001255!1.19e-11!2;UBERON:0001556!1.19e-11!2;UBERON:0001557!5.86e-10!19;UBERON:0000974!5.06e-09!10;UBERON:0008814!5.93e-09!15;UBERON:0000161!8.48e-09!35;UBERON:0000078!1.41e-07!18;UBERON:0002372!3.52e-07!1;UBERON:0001961!3.52e-07!1;UBERON:0001744!3.52e-07!1;UBERON:0001735!3.52e-07!1;UBERON:0001000!4.43e-07!1;UBERON:0005352!4.43e-07!1;UBERON:0000989!5.89e-07!1;UBERON:0008811!5.89e-07!1;UBERON:0006258!5.89e-07!1;UBERON:0005876!5.89e-07!1;UBERON:0004874!5.89e-07!1;UBERON:0000997!9.79e-07!1;UBERON:0005056!9.79e-07!1 | |ontology_enrichment_uberon=UBERON:0001042!1.96e-19!10;UBERON:0009145!1.96e-19!10;UBERON:0006562!1.28e-17!11;UBERON:0001723!1.79e-17!3;UBERON:0001033!1.79e-17!3;UBERON:0010056!1.79e-17!3;UBERON:0001255!1.19e-11!2;UBERON:0001556!1.19e-11!2;UBERON:0001557!5.86e-10!19;UBERON:0000974!5.06e-09!10;UBERON:0008814!5.93e-09!15;UBERON:0000161!8.48e-09!35;UBERON:0000078!1.41e-07!18;UBERON:0002372!3.52e-07!1;UBERON:0001961!3.52e-07!1;UBERON:0001744!3.52e-07!1;UBERON:0001735!3.52e-07!1;UBERON:0001000!4.43e-07!1;UBERON:0005352!4.43e-07!1;UBERON:0000989!5.89e-07!1;UBERON:0008811!5.89e-07!1;UBERON:0006258!5.89e-07!1;UBERON:0005876!5.89e-07!1;UBERON:0004874!5.89e-07!1;UBERON:0000997!9.79e-07!1;UBERON:0005056!9.79e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;4.61e-26;1!UBERON:0001961;4.61e-26;1!UBERON:0001744;4.61e-26;1!UBERON:0001042;4.61e-26;1!UBERON:0001735;4.61e-26;1!UBERON:0001000;8.64e-26;1!UBERON:0005352;8.64e-26;1!UBERON:0006562;9.40e-14;2!UBERON:0000341;1.29e-13;2!UBERON:0001043;1.14e-09;3!UBERON:0006947;1.60e-09;3!UBERON:0004054;1.60e-09;3!UBERON:0000014;1.44e-07;4!UBERON:0005904;1.86e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002372;4.61e-26;1!UBERON:0001961;4.61e-26;1!UBERON:0001744;4.61e-26;1!UBERON:0001042;4.61e-26;1!UBERON:0001735;4.61e-26;1!UBERON:0001000;8.64e-26;1!UBERON:0005352;8.64e-26;1!UBERON:0006562;9.40e-14;2!UBERON:0000341;1.29e-13;2!UBERON:0001043;1.14e-09;3!UBERON:0006947;1.60e-09;3!UBERON:0004054;1.60e-09;3!UBERON:0000014;1.44e-07;4!UBERON:0005904;1.86e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,4.61e-26,1;UBERON:0001961,4.61e-26,1;UBERON:0001744,4.61e-26,1;UBERON:0001735,4.61e-26,1;UBERON:0001000,1.26e-25,1;UBERON:0005352,1.26e-25,1;UBERON:0000341,1.07e-13,2;UBERON:0001043,1.10e-09,3;UBERON:0009143,1.10e-09,3;UBERON:0006947,1.81e-09,3;UBERON:0004054,1.81e-09,3;UBERON:0000014,1.49e-07,4;UBERON:0005904,2.04e-07,4 | |||
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|short_description=p2@KEL | |short_description=p2@KEL | ||
}} | }} |
Latest revision as of 22:39, 16 September 2015
Short description: | p2@KEL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KEL_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | -40bp_to_ENST00000470850_5end |
EntrezGene: | KEL |
HGNC: | 6308 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 8.11e-07 | 15 |
glial cell | 8.11e-07 | 15 |
glioblast | 8.11e-07 | 15 |
glioblast (sensu Vertebrata) | 8.11e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
tonsil | 4.61e-26 | 1 |
mucosa-associated lymphoid tissue | 4.61e-26 | 1 |
lymphoid tissue | 4.61e-26 | 1 |
tonsillar ring | 4.61e-26 | 1 |
vas deferens | 1.26e-25 | 1 |
spermatic cord | 1.26e-25 | 1 |
throat | 1.07e-13 | 2 |
esophagus | 1.10e-09 | 3 |
esophageal region | 1.10e-09 | 3 |
male genital duct | 1.81e-09 | 3 |
internal male genitalia | 1.81e-09 | 3 |
zone of skin | 1.49e-07 | 4 |
duct of male reproductive system | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.58e-26 | 1 |
keratoacanthoma | 3.58e-26 | 1 |
skin carcinoma | 8.28e-14 | 2 |
skin cancer | 8.28e-14 | 2 |
integumentary system cancer | 8.28e-14 | 2 |
nervous system cancer | 2.77e-09 | 11 |