FFCP PHASE1:Hg19::chr2:131594505..131594522,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50649 | |EntrezGene=50649 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=684 | |HGNC=684 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000526381_5end | |association_with_transcript=16bp_to_ENST00000526381_5end | ||
|cluster_id=chr2:131594505..131594522,+ | |||
|coexpression_cluster_id=C4126 | |coexpression_cluster_id=C4126 | ||
|description=CAGE_peak_5_at_ARHGEF4_5end | |description=CAGE_peak_5_at_ARHGEF4_5end | ||
|id=chr2:131594505..131594522,+ | |id=chr2:131594505..131594522,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.32e-11!254;CL:0002076!3.14e-09!43;CL:0002251!2.59e-08!21 | |ontology_enrichment_celltype=CL:0000066!4.32e-11!254;CL:0002076!3.14e-09!43;CL:0002251!2.59e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002251;9.63e-11;20!CL:0000622;4.68e-09;5!CL:0002623;7.90e-09;3!CL:0000154;1.56e-07;6!CL:0002076;5.05e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,1.22e-10,20;CL:0000622,3.17e-09,5;CL:0002623,5.49e-09,3;CL:0002076,2.43e-08,42;CL:0000154,1.13e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.88e-12;82!UBERON:0006241;1.06e-09;3!UBERON:0003057;1.06e-09;3 | |||
|ontology_enrichment_disease=DOID:305!2.59e-09!106;DOID:1749!1.27e-07!14 | |ontology_enrichment_disease=DOID:305!2.59e-09!106;DOID:1749!1.27e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.46e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.71e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.69e-38!57;UBERON:0005068!1.69e-38!57;UBERON:0006241!1.69e-38!57;UBERON:0007135!1.69e-38!57;UBERON:0001017!2.03e-33!82;UBERON:0000153!1.95e-32!129;UBERON:0007811!1.95e-32!129;UBERON:0000033!2.93e-32!123;UBERON:0005743!8.87e-32!86;UBERON:0000955!3.28e-31!69;UBERON:0006238!3.28e-31!69;UBERON:0002616!1.35e-30!59;UBERON:0000073!1.79e-29!94;UBERON:0001016!1.79e-29!94;UBERON:0002780!3.60e-29!41;UBERON:0001890!3.60e-29!41;UBERON:0006240!3.60e-29!41;UBERON:0004121!1.02e-28!169;UBERON:0000924!3.83e-28!173;UBERON:0006601!3.83e-28!173;UBERON:0003080!3.91e-28!42;UBERON:0001893!7.67e-26!34;UBERON:0002020!9.84e-26!34;UBERON:0003528!9.84e-26!34;UBERON:0003075!1.69e-25!86;UBERON:0007284!1.69e-25!86;UBERON:0002791!6.47e-25!33;UBERON:0002346!1.93e-24!90;UBERON:0001869!9.10e-24!32;UBERON:0007023!2.16e-23!115;UBERON:0003056!1.21e-20!61;UBERON:0000956!1.47e-17!25;UBERON:0000203!1.47e-17!25;UBERON:0002619!1.21e-15!22;UBERON:0001950!1.04e-13!20;UBERON:0000064!2.34e-12!219;UBERON:0000477!1.94e-11!286;UBERON:0000062!2.68e-11!511;UBERON:0003076!2.68e-11!15;UBERON:0003057!2.68e-11!15;UBERON:0000922!1.71e-10!612;UBERON:0000475!5.36e-10!365;UBERON:0002308!8.48e-10!9;UBERON:0000125!8.48e-10!9;UBERON:0002420!9.32e-10!9;UBERON:0007245!9.32e-10!9;UBERON:0010009!9.32e-10!9;UBERON:0010011!9.32e-10!9;UBERON:0000454!9.32e-10!9;UBERON:0004111!1.61e-09!241;UBERON:0000481!2.15e-09!347;UBERON:0001004!3.42e-09!72;UBERON:0000161!7.60e-09!35;UBERON:0002050!1.57e-08!605;UBERON:0005423!1.57e-08!605;UBERON:0000166!2.14e-08!21;UBERON:0004119!3.05e-08!169;UBERON:0000925!3.05e-08!169;UBERON:0006595!3.05e-08!169;UBERON:0000923!3.49e-08!604;UBERON:0005291!3.49e-08!604;UBERON:0006598!3.49e-08!604;UBERON:0002532!3.49e-08!604;UBERON:0004733!3.82e-08!12;UBERON:0002028!3.82e-08!12;UBERON:0007277!3.82e-08!12;UBERON:0009663!6.22e-08!7;UBERON:0000468!7.60e-08!659;UBERON:0002298!1.84e-07!8;UBERON:0004732!2.78e-07!13;UBERON:0001007!3.47e-07!155;UBERON:0001555!3.47e-07!155;UBERON:0007026!3.47e-07!155;UBERON:0000200!3.55e-07!6;UBERON:0000467!3.74e-07!625;UBERON:0000480!4.53e-07!626 | |ontology_enrichment_uberon=UBERON:0001049!1.69e-38!57;UBERON:0005068!1.69e-38!57;UBERON:0006241!1.69e-38!57;UBERON:0007135!1.69e-38!57;UBERON:0001017!2.03e-33!82;UBERON:0000153!1.95e-32!129;UBERON:0007811!1.95e-32!129;UBERON:0000033!2.93e-32!123;UBERON:0005743!8.87e-32!86;UBERON:0000955!3.28e-31!69;UBERON:0006238!3.28e-31!69;UBERON:0002616!1.35e-30!59;UBERON:0000073!1.79e-29!94;UBERON:0001016!1.79e-29!94;UBERON:0002780!3.60e-29!41;UBERON:0001890!3.60e-29!41;UBERON:0006240!3.60e-29!41;UBERON:0004121!1.02e-28!169;UBERON:0000924!3.83e-28!173;UBERON:0006601!3.83e-28!173;UBERON:0003080!3.91e-28!42;UBERON:0001893!7.67e-26!34;UBERON:0002020!9.84e-26!34;UBERON:0003528!9.84e-26!34;UBERON:0003075!1.69e-25!86;UBERON:0007284!1.69e-25!86;UBERON:0002791!6.47e-25!33;UBERON:0002346!1.93e-24!90;UBERON:0001869!9.10e-24!32;UBERON:0007023!2.16e-23!115;UBERON:0003056!1.21e-20!61;UBERON:0000956!1.47e-17!25;UBERON:0000203!1.47e-17!25;UBERON:0002619!1.21e-15!22;UBERON:0001950!1.04e-13!20;UBERON:0000064!2.34e-12!219;UBERON:0000477!1.94e-11!286;UBERON:0000062!2.68e-11!511;UBERON:0003076!2.68e-11!15;UBERON:0003057!2.68e-11!15;UBERON:0000922!1.71e-10!612;UBERON:0000475!5.36e-10!365;UBERON:0002308!8.48e-10!9;UBERON:0000125!8.48e-10!9;UBERON:0002420!9.32e-10!9;UBERON:0007245!9.32e-10!9;UBERON:0010009!9.32e-10!9;UBERON:0010011!9.32e-10!9;UBERON:0000454!9.32e-10!9;UBERON:0004111!1.61e-09!241;UBERON:0000481!2.15e-09!347;UBERON:0001004!3.42e-09!72;UBERON:0000161!7.60e-09!35;UBERON:0002050!1.57e-08!605;UBERON:0005423!1.57e-08!605;UBERON:0000166!2.14e-08!21;UBERON:0004119!3.05e-08!169;UBERON:0000925!3.05e-08!169;UBERON:0006595!3.05e-08!169;UBERON:0000923!3.49e-08!604;UBERON:0005291!3.49e-08!604;UBERON:0006598!3.49e-08!604;UBERON:0002532!3.49e-08!604;UBERON:0004733!3.82e-08!12;UBERON:0002028!3.82e-08!12;UBERON:0007277!3.82e-08!12;UBERON:0009663!6.22e-08!7;UBERON:0000468!7.60e-08!659;UBERON:0002298!1.84e-07!8;UBERON:0004732!2.78e-07!13;UBERON:0001007!3.47e-07!155;UBERON:0001555!3.47e-07!155;UBERON:0007026!3.47e-07!155;UBERON:0000200!3.55e-07!6;UBERON:0000467!3.74e-07!625;UBERON:0000480!4.53e-07!626 | ||
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| ||
|short_description=p5@ARHGEF4 | |short_description=p5@ARHGEF4 | ||
}} | }} |
Latest revision as of 23:03, 16 September 2015
Short description: | p5@ARHGEF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARHGEF4_5end |
Coexpression cluster: | C4126_salivary_astrocytoma_spinal_hippocampus_medulla_thalamus_amygdala |
Association with transcript: | 16bp_to_ENST00000526381_5end |
EntrezGene: | ARHGEF4 |
HGNC: | 684 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 1.22e-10 | 20 |
acinar cell | 3.17e-09 | 5 |
acinar cell of salivary gland | 5.49e-09 | 3 |
endo-epithelial cell | 2.43e-08 | 42 |
protein secreting cell | 1.13e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.71e-08 | 14 |