FFCP PHASE1:Hg19::chr7:143079890..143079914,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7791 | |EntrezGene=7791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13200 | |HGNC=13200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-28bp_to_ENST00000436448_5end | |association_with_transcript=-28bp_to_ENST00000436448_5end | ||
|cluster_id=chr7:143079890..143079914,+ | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_9_at_ZYX_5end | |description=CAGE_peak_9_at_ZYX_5end | ||
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|ontology_enrichment_celltype=CL:0002057!3.03e-11!42;CL:0002194!4.32e-10!63;CL:0000576!4.32e-10!63;CL:0000040!4.32e-10!63;CL:0000559!4.32e-10!63;CL:0000144!7.57e-10!625;CL:0000766!9.01e-10!76;CL:0002371!9.84e-10!591;CL:0000860!1.56e-09!45;CL:0002009!3.53e-09!65;CL:0000839!3.95e-09!70;CL:0000557!7.85e-09!71;CL:0000222!1.32e-07!119 | |ontology_enrichment_celltype=CL:0002057!3.03e-11!42;CL:0002194!4.32e-10!63;CL:0000576!4.32e-10!63;CL:0000040!4.32e-10!63;CL:0000559!4.32e-10!63;CL:0000144!7.57e-10!625;CL:0000766!9.01e-10!76;CL:0002371!9.84e-10!591;CL:0000860!1.56e-09!45;CL:0002009!3.53e-09!65;CL:0000839!3.95e-09!70;CL:0000557!7.85e-09!71;CL:0000222!1.32e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.53e-10;39!CL:0000234;1.53e-10;39!CL:0000860;3.02e-10;33!CL:0002057;3.02e-10;33!CL:0000576;3.14e-08;48 | |ontology_enrichment_celltype_v019=CL:0000473;1.53e-10;39!CL:0000234;1.53e-10;39!CL:0000860;3.02e-10;33!CL:0002057;3.02e-10;33!CL:0000576;3.14e-08;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.25e-15,48;CL:0000234,6.25e-15,48;CL:0000860,1.58e-12,42;CL:0002057,1.58e-12,42;CL:0002194,3.45e-12,59;CL:0000576,3.45e-12,59;CL:0000040,3.45e-12,59;CL:0000559,3.45e-12,59;CL:0002009,2.53e-11,61;CL:0000766,9.75e-11,72;CL:0000839,4.76e-10,66;CL:0000557,1.07e-09,67 | |||
|ontology_enrichment_development_v019=CL:0002057;5.83e-09;42 | |ontology_enrichment_development_v019=CL:0002057;5.83e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.06e-13!216;UBERON:0002204!3.16e-12!167;UBERON:0000926!1.23e-11!448;UBERON:0004120!1.23e-11!448;UBERON:0006603!1.23e-11!448;UBERON:0002371!3.00e-08!80;UBERON:0004765!7.53e-08!101;UBERON:0001434!7.53e-08!101;UBERON:0001474!2.39e-07!86;UBERON:0004872!7.93e-07!84;UBERON:0002049!8.81e-07!79;UBERON:0007798!8.81e-07!79 | |ontology_enrichment_uberon=UBERON:0003081!2.06e-13!216;UBERON:0002204!3.16e-12!167;UBERON:0000926!1.23e-11!448;UBERON:0004120!1.23e-11!448;UBERON:0006603!1.23e-11!448;UBERON:0002371!3.00e-08!80;UBERON:0004765!7.53e-08!101;UBERON:0001434!7.53e-08!101;UBERON:0001474!2.39e-07!86;UBERON:0004872!7.93e-07!84;UBERON:0002049!8.81e-07!79;UBERON:0007798!8.81e-07!79 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.11e-18,315;UBERON:0004120,1.11e-18,315;UBERON:0006603,1.11e-18,315;UBERON:0003081,3.55e-14,203;UBERON:0002204,7.11e-13,167;UBERON:0001434,9.47e-10,100;UBERON:0004765,4.36e-09,90;UBERON:0002371,1.27e-08,76;UBERON:0001474,5.13e-08,82;UBERON:0002405,3.63e-07,93 | |||
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| ||
|short_description=p9@ZYX | |short_description=p9@ZYX | ||
}} | }} |
Latest revision as of 23:20, 16 September 2015
Short description: | p9@ZYX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ZYX_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -28bp_to_ENST00000436448_5end |
EntrezGene: | ZYX |
HGNC: | 13200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.25e-15 | 48 |
phagocyte | 6.25e-15 | 48 |
classical monocyte | 1.58e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.58e-12 | 42 |
monopoietic cell | 3.45e-12 | 59 |
monocyte | 3.45e-12 | 59 |
monoblast | 3.45e-12 | 59 |
promonocyte | 3.45e-12 | 59 |
macrophage dendritic cell progenitor | 2.53e-11 | 61 |
myeloid leukocyte | 9.75e-11 | 72 |
myeloid lineage restricted progenitor cell | 4.76e-10 | 66 |
granulocyte monocyte progenitor cell | 1.07e-09 | 67 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.11e-18 | 315 |
mesoderm-derived structure | 1.11e-18 | 315 |
presumptive mesoderm | 1.11e-18 | 315 |
lateral plate mesoderm | 3.55e-14 | 203 |
musculoskeletal system | 7.11e-13 | 167 |
skeletal system | 9.47e-10 | 100 |
skeletal element | 4.36e-09 | 90 |
bone marrow | 1.27e-08 | 76 |
bone element | 5.13e-08 | 82 |
immune system | 3.63e-07 | 93 |