FFCP PHASE1:Hg19::chr2:33359778..33359791,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4052 | |EntrezGene=4052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6714 | |HGNC=6714 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=54bp_to_ENST00000407925_5end | |association_with_transcript=54bp_to_ENST00000407925_5end | ||
|cluster_id=chr2:33359778..33359791,+ | |||
|coexpression_cluster_id=C1630 | |||
|description=CAGE_peak_6_at_LTBP1_5end | |description=CAGE_peak_6_at_LTBP1_5end | ||
|id=chr2:33359778..33359791,+ | |id=chr2:33359778..33359791,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.01e-33!180;CL:0000680!8.46e-21!57;CL:0000056!8.46e-21!57;CL:0000355!8.46e-21!57;CL:0000183!8.86e-21!59;CL:0000187!1.03e-19!54;CL:0000057!2.17e-18!75;CL:0000393!5.89e-16!60;CL:0000211!5.89e-16!60;CL:0000192!7.68e-16!42;CL:0000514!7.68e-16!42;CL:0000359!8.38e-13!32;CL:0002620!1.08e-12!23;CL:0000048!2.04e-08!430;CL:0000723!3.44e-08!436;CL:0000034!1.37e-07!444;CL:0000222!2.93e-07!119 | |ontology_enrichment_celltype=CL:0000055!7.01e-33!180;CL:0000680!8.46e-21!57;CL:0000056!8.46e-21!57;CL:0000355!8.46e-21!57;CL:0000183!8.86e-21!59;CL:0000187!1.03e-19!54;CL:0000057!2.17e-18!75;CL:0000393!5.89e-16!60;CL:0000211!5.89e-16!60;CL:0000192!7.68e-16!42;CL:0000514!7.68e-16!42;CL:0000359!8.38e-13!32;CL:0002620!1.08e-12!23;CL:0000048!2.04e-08!430;CL:0000723!3.44e-08!436;CL:0000034!1.37e-07!444;CL:0000222!2.93e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.17e-17;23!CL:0000359;1.36e-17;32!CL:0000192;3.94e-14;43!CL:0002539;1.92e-11;10!CL:0000187;2.25e-10;55!CL:0000393;1.17e-08;61!CL:0000211;1.17e-08;61!CL:0000569;4.38e-08;4!CL:0002551;3.54e-07;6!CL:0002320;6.92e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.07e-18,32;CL:0000192,1.29e-17,43;CL:0000514,1.29e-17,43;CL:0000187,1.53e-17,55;CL:0002620,1.71e-17,23;CL:0000680,3.56e-16,58;CL:0000056,3.56e-16,58;CL:0000355,3.56e-16,58;CL:0000057,4.52e-15,76;CL:0000393,5.99e-15,61;CL:0000211,5.99e-15,61;CL:0000048,1.29e-14,427;CL:0000723,4.78e-14,433;CL:0000034,2.56e-13,441;CL:0002539,1.60e-11,10;CL:0000569,4.40e-08,4;CL:0000011,4.40e-08,4;CL:0002320,1.64e-07,361;CL:0002551,3.80e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;3.94e-14;43!CL:0000011;4.38e-08;4!CL:0000355;1.87e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.37e-24!83;UBERON:0002329!3.37e-24!83;UBERON:0003077!3.37e-24!83;UBERON:0003059!3.37e-24!83;UBERON:0007282!3.37e-24!83;UBERON:0009618!3.37e-24!83;UBERON:0007285!3.37e-24!83;UBERON:0004290!1.55e-22!70;UBERON:0001134!3.18e-19!61;UBERON:0002036!3.18e-19!61;UBERON:0003082!3.18e-19!61;UBERON:0002385!1.13e-18!63;UBERON:0001015!1.13e-18!63;UBERON:0000383!1.13e-18!63;UBERON:0000486!5.94e-18!82;UBERON:0001637!6.95e-15!42;UBERON:0003509!6.95e-15!42;UBERON:0004572!6.95e-15!42;UBERON:0004573!1.47e-14!33;UBERON:0004571!1.47e-14!33;UBERON:0004535!8.64e-14!110;UBERON:0001009!1.56e-13!113;UBERON:0004872!1.01e-12!84;UBERON:0001981!2.07e-12!60;UBERON:0007500!2.07e-12!60;UBERON:0004537!2.07e-12!60;UBERON:0006965!2.07e-12!60;UBERON:0002049!3.27e-12!79;UBERON:0007798!3.27e-12!79;UBERON:0005256!5.68e-12!143;UBERON:0000055!4.98e-11!69;UBERON:0003102!7.51e-11!95;UBERON:0002199!2.58e-09!45;UBERON:0002416!2.58e-09!45;UBERON:0000475!3.27e-09!365;UBERON:0002097!4.42e-09!40;UBERON:0000948!1.25e-08!24;UBERON:0005498!1.25e-08!24;UBERON:0004140!1.25e-08!24;UBERON:0009881!1.25e-08!24;UBERON:0004141!1.25e-08!24;UBERON:0003084!1.25e-08!24;UBERON:0007005!1.25e-08!24;UBERON:0004139!1.25e-08!24;UBERON:0004291!1.25e-08!24;UBERON:0000119!1.29e-08!312;UBERON:0000947!1.39e-08!21;UBERON:0010191!1.39e-08!21;UBERON:0007100!6.70e-08!27;UBERON:0000483!7.58e-08!309;UBERON:0000490!1.30e-07!138;UBERON:0003914!1.40e-07!118;UBERON:0000481!1.66e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.32e-16;33!UBERON:0004571;7.32e-16;33!UBERON:0004237;1.92e-11;10!UBERON:0004695;1.92e-11;10!UBERON:0002111;1.92e-11;10!UBERON:0004178;1.92e-11;10!UBERON:0001637;2.63e-10;42!UBERON:0003509;2.63e-10;42!UBERON:0004572;2.63e-10;42!UBERON:0011135;1.81e-08;5!UBERON:0002216;1.81e-08;5!UBERON:0011134;1.81e-08;5!UBERON:0002209;1.81e-08;5!UBERON:0002213;1.81e-08;5!UBERON:0007844;1.81e-08;5!UBERON:0011138;1.81e-08;5!UBERON:0001130;1.81e-08;5!UBERON:0001066;1.81e-08;5!UBERON:0001468;1.81e-08;5!UBERON:0000947;3.30e-08;21!UBERON:0010191;3.30e-08;21!UBERON:0002067;3.64e-08;9!UBERON:0002097;6.47e-08;41!UBERON:0003102;4.41e-07;50!UBERON:0002199;4.50e-07;46!UBERON:0002416;4.50e-07;46!UBERON:0004905;4.81e-07;8!UBERON:0000982;4.81e-07;8!UBERON:0004770;4.81e-07;8!UBERON:0007500;5.40e-07;56!UBERON:0001981;5.40e-07;56!UBERON:0004537;5.40e-07;56!UBERON:0001135;5.55e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.08e-20,73;UBERON:0002329,3.05e-20,71;UBERON:0003059,3.05e-20,71;UBERON:0007282,3.05e-20,71;UBERON:0004290,3.05e-20,71;UBERON:0009618,3.05e-20,71;UBERON:0003077,8.33e-20,72;UBERON:0007285,8.33e-20,72;UBERON:0007503,1.96e-17,78;UBERON:0004573,2.52e-17,33;UBERON:0004571,2.52e-17,33;UBERON:0000486,7.27e-17,83;UBERON:0001637,3.15e-15,42;UBERON:0003509,3.15e-15,42;UBERON:0004572,3.15e-15,42;UBERON:0001134,1.44e-14,62;UBERON:0002036,1.44e-14,62;UBERON:0003082,1.44e-14,62;UBERON:0001009,4.74e-14,112;UBERON:0004535,6.21e-14,109;UBERON:0002385,7.61e-14,64;UBERON:0001015,7.61e-14,64;UBERON:0000383,7.61e-14,64;UBERON:0004872,7.36e-13,83;UBERON:0007500,4.36e-12,59;UBERON:0001981,4.36e-12,59;UBERON:0004537,4.36e-12,59;UBERON:0006965,4.36e-12,59;UBERON:0004237,1.60e-11,10;UBERON:0004695,1.60e-11,10;UBERON:0002111,1.60e-11,10;UBERON:0004178,1.60e-11,10;UBERON:0002199,2.52e-11,46;UBERON:0002416,2.52e-11,46;UBERON:0002097,5.44e-11,41;UBERON:0002049,9.53e-11,78;UBERON:0007798,9.53e-11,78;UBERON:0000055,1.39e-10,68;UBERON:0003104,2.12e-09,160;UBERON:0009142,2.12e-09,160;UBERON:0005256,7.96e-09,122;UBERON:0000926,1.27e-08,315;UBERON:0004120,1.27e-08,315;UBERON:0006603,1.27e-08,315;UBERON:0011135,1.55e-08,5;UBERON:0002216,1.55e-08,5;UBERON:0011134,1.55e-08,5;UBERON:0002209,1.55e-08,5;UBERON:0002213,1.55e-08,5;UBERON:0005856,1.55e-08,5;UBERON:0005866,1.55e-08,5;UBERON:0005863,1.55e-08,5;UBERON:0007844,1.55e-08,5;UBERON:0011138,1.55e-08,5;UBERON:0001130,1.55e-08,5;UBERON:0001066,1.55e-08,5;UBERON:0001468,1.55e-08,5;UBERON:0002067,3.16e-08,9;UBERON:0004016,3.16e-08,9;UBERON:0010083,3.16e-08,9;UBERON:0000947,3.36e-08,21;UBERON:0010191,3.36e-08,21;UBERON:0003102,3.66e-08,99;UBERON:0004905,4.41e-07,8;UBERON:0000982,4.41e-07,8;UBERON:0004770,4.41e-07,8;UBERON:0001135,4.96e-07,15;UBERON:0002384,7.79e-07,371 | |||
|phase1_expression=0,1.07050261945492,0,9.00659685178174,4.91657203870017,7.85104671690332,0,0,1.30592814099919,0,0,0,0,1.98026164736075,43.7444535960849,4.03395087871065,4.82155622419182,1.46062018077475,5.85519358548608,3.44738962615006,3.87601313364081,0,1.43117993565528,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,65.0590474292219,0.50133791063589,0.144846518960824,4.7717156823066,5.83961844363163,0,1.10864698731282,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0,0,0,0,6.0424397566372,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.01304409331664,0.794455084879313,182.428090796246,1.41867352879343,0.560677600142307,0,0.49333509683432,0,7.00495494762378,6.53847612453835,4.8434376846378,0,0.234321431833797,3.43376084513353,0,2.09228152772521,13.3875328453892,15.8635485480769,19.803563745017,2.24569588380383,1.35117749042945,1.03325781175765,0,0.494533858557114,20.0235499626366,0.718618141816238,0.168336113954066,0.875829639103749,1.93944880838928,0,0.612975591598039,0.901428353439581,0.453728732640084,6.99619579186562,0.213557388818567,0.211931901159562,18.6056479572329,12.3663035086127,23.9605702242435,0.744467425326359,1.0126579934476,12.4719366606334,47.7099833321376,1.28869858099219,24.2469085228218,38.696045584311,13.4000290642762,0.339121184620975,0,0,0,0,0,0,0,0,0,0,1.92972281457866,2.76269842704961,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,5.60967095213783,0,0,0,0,0,0,0,0.343135620597051,0.219500570817251,0,0,0.0925884451585296,0,7.27954349695705,0,0.231860809950154,0.939269553886573,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,15.1376963866237,11.7709218584986,0.2933531432838,0.129271715757778,0,0,0,1.04007436911366,0.514414748524284,1.41849132023278,0.532844358032199,0.285955987316295,0,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,1.4377491329495,3.44585807502342,2.85273810081437,0.723906533337896,0.821905290201534,0.358121926479791,0,0,0,0,1.27047312111232,0,0,0,0,0,0,0.414415513436035,1.2269149171914,10.0034104211935,55.0667998110463,0.415941723061614,2.14114786556594,0.473107245101804,1.99140405487612,0.300946099727719,0,3.10419213877515,1.32845119707087,0.184369168541703,0.521301686808497,2.54541504701563,3.77457766191941,0,0,0,0,0,0,0,0.460385919864187,0,0,0.511707249066704,0.160853921143607,2.96836132889982,1.54209693802656,0.355123450626254,0.821271560138091,0.519254429183621,20.6854473658727,0,0,0,0.229628896329213,1.0925470080403,0.262248829918848,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0,0,0.96670718292122,6.77813915304435,6.60065801322357,10.3377429363398,0.537101224341368,0.145016693914229,0.170453254832202,0.534192213880424,0,0.192190067365106,0.638063562472921,0.2023155617111,2.78907329578371,182.591161161771,1.3940745403212,3.08033580176089,0,3.47973196830029,2.7798632865588,15.4574877681351,0,1.58189712359363,0.190630193923825,0.511795582622668,1.71175595213568,1.27281299170375,15.6989728039846,0.539617372749944,0.54907405947211,0,0.606547444719948,1.58510321173008,4.63384301862879,0.48763373908959,1.46228093778771,8.45201174054043,29.074481129901,0.424216295861138,4.52032466480971,1.10273068709225,0,26.3070531152258,0.578775534266688,1.9676842561399,0.405820753925408,0,12.3946065114186,0,0.0982490410131212,0.7133421029625,1.06428319221179,0.844430541190656,3.29294892959902,0.75894634753143,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,7.61171413848254,4.58782324285425,0,0,0,1.29694662238543,2.70015718619057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0.445234820091624,0,0,0.996239941255349,0,0,0,0,0.933118762985422,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.615602068030377,0.341826167541004,0,0,0,0,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0.269604531922708,0.802577647298789,0.468528891450678,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.52418000472609,0.51595809741485,0,0,0,0,0,0.451961481561065,0.274083849293502,0.596143835108969,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0.916641696046735,2.15361907373044,0,0,1.11585728720936,0.201550417460179,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0.0788057072991982,0,0.422401346077626,0,0,1.42939065274673,0,0,0,0,0.653174720218818,1.19730191562487,0,0.340776043570843,0.113312091520126,0,0,0.387848869084652,0,0,0,0.427149650270779,6.4453765090863,0,0,0,0,0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| ||
|short_description=p6@LTBP1 | |short_description=p6@LTBP1 | ||
}} | }} |
Latest revision as of 23:41, 16 September 2015
Short description: | p6@LTBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LTBP1_5end |
Coexpression cluster: | C1630_Smooth_Fibroblast_mesenchymal_Chondrocyte_Nucleus_Anulus_Preadipocyte |
Association with transcript: | 54bp_to_ENST00000407925_5end |
EntrezGene: | LTBP1 |
HGNC: | 6714 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.07e-18 | 32 |
smooth muscle cell | 1.29e-17 | 43 |
smooth muscle myoblast | 1.29e-17 | 43 |
muscle cell | 1.53e-17 | 55 |
skin fibroblast | 1.71e-17 | 23 |
muscle precursor cell | 3.56e-16 | 58 |
myoblast | 3.56e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.56e-16 | 58 |
fibroblast | 4.52e-15 | 76 |
electrically responsive cell | 5.99e-15 | 61 |
electrically active cell | 5.99e-15 | 61 |
multi fate stem cell | 1.29e-14 | 427 |
somatic stem cell | 4.78e-14 | 433 |
stem cell | 2.56e-13 | 441 |
aortic smooth muscle cell | 1.60e-11 | 10 |
cardiac mesenchymal cell | 4.40e-08 | 4 |
migratory trunk neural crest cell | 4.40e-08 | 4 |
connective tissue cell | 1.64e-07 | 361 |
fibroblast of dermis | 3.80e-07 | 6 |