FFCP PHASE1:Hg19::chr15:25101810..25101823,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6638 | |EntrezGene=6638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11164 | |HGNC=11164 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=62bp_to_ENST00000553597_5end | |association_with_transcript=62bp_to_ENST00000553597_5end | ||
|cluster_id=chr15:25101810..25101823,+ | |||
|description=CAGE_peak_12_at_SNRPN_5end | |description=CAGE_peak_12_at_SNRPN_5end | ||
|id=chr15:25101810..25101823,+ | |id=chr15:25101810..25101823,+ | ||
|ontology_enrichment_celltype=CL:0000047!2.96e-17!8;CL:0000540!1.83e-13!6;CL:0000031!1.83e-13!6;CL:0000404!1.83e-13!6;CL:0002322!5.31e-11!5;CL:0002319!1.12e-10!25;CL:0002594!1.94e-08!4;CL:0002605!1.67e-07!3;CL:0000133!1.67e-07!59;CL:0000128!2.14e-07!7;CL:0000126!2.14e-07!7;CL:0000127!2.14e-07!7;CL:0002453!2.14e-07!7 | |ontology_enrichment_celltype=CL:0000047!2.96e-17!8;CL:0000540!1.83e-13!6;CL:0000031!1.83e-13!6;CL:0000404!1.83e-13!6;CL:0002322!5.31e-11!5;CL:0002319!1.12e-10!25;CL:0002594!1.94e-08!4;CL:0002605!1.67e-07!3;CL:0000133!1.67e-07!59;CL:0000128!2.14e-07!7;CL:0000126!2.14e-07!7;CL:0000127!2.14e-07!7;CL:0002453!2.14e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000540;8.45e-27;6!CL:0000404;8.45e-27;6!CL:0002319;5.79e-18;25!CL:0002322;1.20e-14;5!CL:0002605;3.06e-14;3!CL:0000047;8.02e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.62e-35,8;CL:0000540,5.10e-27,6;CL:0000031,5.10e-27,6;CL:0000404,5.10e-27,6;CL:0002319,4.39e-18,25;CL:0002322,1.47e-14,5;CL:0002605,2.88e-14,3;CL:0000133,2.39e-11,59;CL:0000221,7.98e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000031;8.45e-27;6!UBERON:0010122;1.81e-09;2!CL:0000133;4.38e-08;59!UBERON:0006241;3.55e-07;3!UBERON:0003057;3.55e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!7.75e-60!86;UBERON:0001017!1.81e-58!82;UBERON:0000073!1.12e-52!94;UBERON:0001016!1.12e-52!94;UBERON:0001049!5.28e-52!57;UBERON:0005068!5.28e-52!57;UBERON:0006241!5.28e-52!57;UBERON:0007135!5.28e-52!57;UBERON:0003075!5.44e-47!86;UBERON:0007284!5.44e-47!86;UBERON:0002346!3.64e-46!90;UBERON:0002616!4.28e-44!59;UBERON:0002020!8.79e-44!34;UBERON:0003528!8.79e-44!34;UBERON:0001893!9.20e-43!34;UBERON:0002791!2.89e-41!33;UBERON:0001869!3.93e-40!32;UBERON:0000955!1.29e-39!69;UBERON:0006238!1.29e-39!69;UBERON:0002780!2.51e-39!41;UBERON:0001890!2.51e-39!41;UBERON:0006240!2.51e-39!41;UBERON:0003056!4.65e-39!61;UBERON:0003080!3.54e-38!42;UBERON:0000924!2.77e-29!173;UBERON:0006601!2.77e-29!173;UBERON:0004121!3.41e-29!169;UBERON:0000956!2.13e-28!25;UBERON:0000203!2.13e-28!25;UBERON:0000033!7.10e-28!123;UBERON:0000153!6.49e-26!129;UBERON:0007811!6.49e-26!129;UBERON:0000025!1.12e-23!194;UBERON:0002619!5.65e-23!22;UBERON:0001950!7.94e-20!20;UBERON:0002308!3.10e-17!9;UBERON:0000125!3.10e-17!9;UBERON:0002420!1.33e-16!9;UBERON:0007245!1.33e-16!9;UBERON:0010009!1.33e-16!9;UBERON:0010011!1.33e-16!9;UBERON:0000454!1.33e-16!9;UBERON:0000119!4.50e-16!312;UBERON:0004111!8.92e-16!241;UBERON:0000483!9.85e-16!309;UBERON:0000477!1.07e-14!286;UBERON:0003076!1.79e-14!15;UBERON:0003057!1.79e-14!15;UBERON:0007023!1.27e-13!115;UBERON:0009663!2.12e-13!7;UBERON:0000349!5.23e-10!5;UBERON:0004733!1.17e-09!12;UBERON:0002028!1.17e-09!12;UBERON:0007277!1.17e-09!12;UBERON:0000922!1.21e-09!612;UBERON:0007625!1.54e-09!11;UBERON:0000064!3.30e-09!219;UBERON:0000369!3.99e-09!4;UBERON:0002435!3.99e-09!4;UBERON:0000204!3.99e-09!4;UBERON:0010082!3.99e-09!4;UBERON:0002298!7.47e-09!8;UBERON:0004732!8.62e-09!13;UBERON:0001310!1.94e-08!4;UBERON:0002680!1.56e-07!9;UBERON:0001895!1.56e-07!9;UBERON:0010092!1.56e-07!9;UBERON:0000488!1.59e-07!4;UBERON:0000475!1.60e-07!365;UBERON:0005383!2.43e-07!3;UBERON:0005382!2.43e-07!3;UBERON:0000481!2.55e-07!347;UBERON:0000988!2.99e-07!3;UBERON:0000468!3.06e-07!659;UBERON:0000923!3.54e-07!604;UBERON:0005291!3.54e-07!604;UBERON:0006598!3.54e-07!604;UBERON:0002532!3.54e-07!604;UBERON:0002240!3.91e-07!3;UBERON:0002050!3.96e-07!605;UBERON:0005423!3.96e-07!605;UBERON:0001872!6.50e-07!5;UBERON:0006331!8.92e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.68e-24;34!UBERON:0002020;3.68e-24;34!UBERON:0000125;6.84e-23;9!UBERON:0002308;6.84e-23;9!UBERON:0001869;6.73e-19;32!UBERON:0002791;7.72e-19;32!UBERON:0000369;1.44e-17;4!UBERON:0002435;1.44e-17;4!UBERON:0000204;1.44e-17;4!UBERON:0001893;7.19e-16;34!UBERON:0009663;2.99e-15;7!UBERON:0000988;6.98e-14;3!UBERON:0005383;1.06e-13;3!UBERON:0005382;1.06e-13;3!UBERON:0002780;3.91e-13;41!UBERON:0001890;3.91e-13;41!UBERON:0000073;5.08e-13;53!UBERON:0002616;5.08e-13;53!UBERON:0002298;4.15e-12;6!UBERON:0002420;8.23e-12;9!UBERON:0007245;8.23e-12;9!UBERON:0010009;8.23e-12;9!UBERON:0010011;8.23e-12;9!UBERON:0000454;8.23e-12;9!UBERON:0000955;1.28e-11;68!UBERON:0001017;1.72e-10;75!UBERON:0001016;2.67e-10;83!UBERON:0002148;5.24e-10;2!UBERON:0006331;5.24e-10;2!UBERON:0009662;5.24e-10;2!UBERON:0000956;1.17e-09;25!UBERON:0000203;1.17e-09;25!UBERON:0001873;1.81e-09;2!UBERON:0002240;3.55e-07;3!UBERON:0005174;3.55e-07;3!UBERON:0001137;3.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.09e-38,81;UBERON:0001016,5.54e-34,89;UBERON:0001049,3.97e-26,56;UBERON:0005068,3.97e-26,56;UBERON:0006241,3.97e-26,56;UBERON:0007135,3.97e-26,56;UBERON:0003528,7.02e-25,34;UBERON:0002020,7.02e-25,34;UBERON:0000125,6.34e-23,9;UBERON:0002308,6.34e-23,9;UBERON:0000073,5.73e-22,53;UBERON:0002616,5.73e-22,53;UBERON:0002791,1.16e-19,32;UBERON:0001869,1.16e-19,32;UBERON:0001893,2.24e-18,34;UBERON:0000955,3.87e-18,68;UBERON:0006238,3.87e-18,68;UBERON:0000369,1.00e-17,4;UBERON:0002435,1.00e-17,4;UBERON:0000204,1.00e-17,4;UBERON:0010082,1.00e-17,4;UBERON:0002780,2.88e-17,41;UBERON:0001890,2.88e-17,41;UBERON:0003080,2.88e-17,41;UBERON:0006240,2.88e-17,41;UBERON:0003075,1.85e-16,82;UBERON:0007284,1.85e-16,82;UBERON:0002346,1.73e-15,86;UBERON:0009663,2.78e-15,7;UBERON:0004121,8.69e-15,171;UBERON:0000924,8.69e-15,171;UBERON:0006601,8.69e-15,171;UBERON:0005383,6.42e-14,3;UBERON:0005382,6.42e-14,3;UBERON:0000988,9.97e-14,3;UBERON:0010371,4.82e-12,104;UBERON:0002298,5.98e-12,6;UBERON:0010314,5.98e-12,132;UBERON:0002420,7.79e-12,9;UBERON:0007245,7.79e-12,9;UBERON:0010009,7.79e-12,9;UBERON:0010011,7.79e-12,9;UBERON:0000454,7.79e-12,9;UBERON:0011216,9.28e-11,223;UBERON:0003056,1.03e-10,61;UBERON:0003076,2.88e-10,15;UBERON:0003057,2.88e-10,15;UBERON:0002148,5.26e-10,2;UBERON:0006331,5.26e-10,2;UBERON:0009662,5.26e-10,2;UBERON:0000956,1.02e-09,25;UBERON:0000203,1.02e-09,25;UBERON:0001873,1.07e-09,2;UBERON:0010122,1.07e-09,2;UBERON:0000025,2.61e-08,192;UBERON:0002240,2.92e-07,3;UBERON:0005174,2.92e-07,3;UBERON:0001137,2.92e-07,3 | |||
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| ||
|short_description=p12@SNRPN | |short_description=p12@SNRPN | ||
}} | }} |
Latest revision as of 00:09, 17 September 2015
Short description: | p12@SNRPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SNRPN_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000553597_5end |
EntrezGene: | SNRPN |
HGNC: | 11164 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.62e-35 | 8 |
neuron | 5.10e-27 | 6 |
neuroblast | 5.10e-27 | 6 |
electrically signaling cell | 5.10e-27 | 6 |
neural cell | 4.39e-18 | 25 |
embryonic stem cell | 1.47e-14 | 5 |
astrocyte of the cerebral cortex | 2.88e-14 | 3 |
neurectodermal cell | 2.39e-11 | 59 |
ectodermal cell | 7.98e-09 | 72 |