FFCP PHASE1:Hg19::chr11:17741084..17741094,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4654 | |EntrezGene=4654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7611 | |HGNC=7611 | ||
|TSSclassifier=strong | |||
|UniProt=P15172 | |UniProt=P15172 | ||
|association_with_transcript=-15bp_to_NM_002478,uc001mni.2_5end | |association_with_transcript=-15bp_to_NM_002478,uc001mni.2_5end | ||
|cluster_id=chr11:17741084..17741094,+ | |||
|coexpression_cluster_id=C737 | |coexpression_cluster_id=C737 | ||
|description=CAGE_peak_3_at_MYOD1_5end | |description=CAGE_peak_3_at_MYOD1_5end | ||
|id=chr11:17741084..17741094,+ | |id=chr11:17741084..17741094,+ | ||
|ontology_enrichment_celltype=CL:0000188!2.48e-33!9;CL:0000515!2.70e-16!4;CL:0002586!5.68e-12!3;CL:0000594!6.12e-12!3;CL:0002603!1.54e-11!3;CL:0000680!6.57e-10!57;CL:0000056!6.57e-10!57;CL:0000355!6.57e-10!57;CL:0000149!4.37e-09!4 | |ontology_enrichment_celltype=CL:0000188!2.48e-33!9;CL:0000515!2.70e-16!4;CL:0002586!5.68e-12!3;CL:0000594!6.12e-12!3;CL:0002603!1.54e-11!3;CL:0000680!6.57e-10!57;CL:0000056!6.57e-10!57;CL:0000355!6.57e-10!57;CL:0000149!4.37e-09!4 | ||
|ontology_enrichment_celltype_v019=CL:0000188;1.44e-39;9!CL:0000680;8.95e-38;7!CL:0000056;2.93e-30;4!CL:0000515;3.45e-23;3!CL:0000594;9.35e-11;3!CL:0000228;7.75e-09;1!CL:0002372;7.75e-09;1!CL:0002321;3.30e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.57e-39,9;CL:0000515,2.62e-30,4;CL:0000680,3.52e-11,58;CL:0000056,3.52e-11,58;CL:0000355,3.52e-11,58;CL:0000594,1.26e-10,3;CL:0000228,6.65e-09,1;CL:0002372,6.65e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000515;2.93e-30;4!UBERON:0004874;1.53e-08;1!CL:0000355;5.22e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!5.53e-16!61;UBERON:0002036!5.53e-16!61;UBERON:0003082!5.53e-16!61;UBERON:0002385!2.47e-15!63;UBERON:0001015!2.47e-15!63;UBERON:0000383!2.47e-15!63;UBERON:0004290!2.33e-13!70;UBERON:0001781!5.68e-12!3;UBERON:0001782!5.68e-12!3;UBERON:0005424!5.68e-12!3;UBERON:0000486!9.00e-11!82;UBERON:0000914!1.37e-10!83;UBERON:0002329!1.37e-10!83;UBERON:0003077!1.37e-10!83;UBERON:0003059!1.37e-10!83;UBERON:0007282!1.37e-10!83;UBERON:0009618!1.37e-10!83;UBERON:0007285!1.37e-10!83;UBERON:0001630!7.22e-09!2;UBERON:0005090!7.22e-09!2;UBERON:0000341!8.10e-09!2;UBERON:0000966!2.40e-07!5;UBERON:0005388!2.40e-07!5;UBERON:0001802!2.40e-07!5 | |ontology_enrichment_uberon=UBERON:0001134!5.53e-16!61;UBERON:0002036!5.53e-16!61;UBERON:0003082!5.53e-16!61;UBERON:0002385!2.47e-15!63;UBERON:0001015!2.47e-15!63;UBERON:0000383!2.47e-15!63;UBERON:0004290!2.33e-13!70;UBERON:0001781!5.68e-12!3;UBERON:0001782!5.68e-12!3;UBERON:0005424!5.68e-12!3;UBERON:0000486!9.00e-11!82;UBERON:0000914!1.37e-10!83;UBERON:0002329!1.37e-10!83;UBERON:0003077!1.37e-10!83;UBERON:0003059!1.37e-10!83;UBERON:0007282!1.37e-10!83;UBERON:0009618!1.37e-10!83;UBERON:0007285!1.37e-10!83;UBERON:0001630!7.22e-09!2;UBERON:0005090!7.22e-09!2;UBERON:0000341!8.10e-09!2;UBERON:0000966!2.40e-07!5;UBERON:0005388!2.40e-07!5;UBERON:0001802!2.40e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.61e-88;16!UBERON:0002036;3.61e-88;16!UBERON:0002385;6.11e-44;31!UBERON:0001015;6.11e-44;31!UBERON:0000383;6.11e-44;31!UBERON:0000341;8.18e-16;2!UBERON:0005090;1.15e-15;2!UBERON:0001630;1.15e-15;2!UBERON:0001723;5.98e-11;3!UBERON:0001033;5.98e-11;3!UBERON:0002204;7.18e-09;70!UBERON:0002426;7.75e-09;1!UBERON:0003831;7.75e-09;1!UBERON:0003898;7.75e-09;1!UBERON:0004830;7.75e-09;1!UBERON:0003830;7.75e-09;1!UBERON:0005175;7.75e-09;1!UBERON:0001774;7.75e-09;1!UBERON:0001103;7.75e-09;1!UBERON:0007029;1.53e-08;1!UBERON:0000989;1.53e-08;1!UBERON:0001389;1.53e-08;1!UBERON:0000026;1.53e-08;1!UBERON:0008784;1.53e-08;1!UBERON:0006058;1.53e-08;1!UBERON:0008811;1.53e-08;1!UBERON:0003663;1.53e-08;1!UBERON:0004256;1.53e-08;1!UBERON:0004708;1.53e-08;1!UBERON:0002101;1.53e-08;1!UBERON:0004709;1.53e-08;1!UBERON:0002529;1.53e-08;1!UBERON:0010538;1.53e-08;1!UBERON:0003661;1.53e-08;1!UBERON:0010890;1.53e-08;1!UBERON:0002471;1.53e-08;1!UBERON:0001383;1.53e-08;1!UBERON:0010758;1.53e-08;1!UBERON:0010707;1.53e-08;1!UBERON:0000978;1.53e-08;1!UBERON:0002103;1.53e-08;1!UBERON:0001665;1.53e-08;1!UBERON:0003823;1.53e-08;1!UBERON:0000154;1.53e-08;1!UBERON:0010709;1.53e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,7.01e-21,62;UBERON:0002036,7.01e-21,62;UBERON:0003082,7.01e-21,62;UBERON:0002385,3.79e-20,64;UBERON:0001015,3.79e-20,64;UBERON:0000383,3.79e-20,64;UBERON:0002329,6.62e-18,71;UBERON:0003059,6.62e-18,71;UBERON:0007282,6.62e-18,71;UBERON:0004290,6.62e-18,71;UBERON:0009618,6.62e-18,71;UBERON:0003077,1.28e-17,72;UBERON:0007285,1.28e-17,72;UBERON:0007524,2.41e-17,73;UBERON:0007503,4.58e-16,78;UBERON:0005090,8.50e-16,2;UBERON:0001630,8.50e-16,2;UBERON:0000341,1.06e-15,2;UBERON:0000486,6.10e-15,83;UBERON:0001723,5.98e-11,3;UBERON:0001033,5.98e-11,3;UBERON:0010056,5.98e-11,3;UBERON:0005256,7.52e-11,122;UBERON:0002426,7.75e-09,1;UBERON:0003831,7.75e-09,1;UBERON:0003898,7.75e-09,1;UBERON:0004830,7.75e-09,1;UBERON:0003830,7.75e-09,1;UBERON:0005175,7.75e-09,1;UBERON:0001774,7.75e-09,1;UBERON:0001103,7.75e-09,1;UBERON:0010084,7.75e-09,1;UBERON:0005418,1.13e-08,1;UBERON:0001389,1.13e-08,1;UBERON:0000026,1.13e-08,1;UBERON:0008784,1.13e-08,1;UBERON:0006058,1.13e-08,1;UBERON:0003663,1.13e-08,1;UBERON:0004256,1.13e-08,1;UBERON:0004708,1.13e-08,1;UBERON:0002101,1.13e-08,1;UBERON:0004709,1.13e-08,1;UBERON:0002529,1.13e-08,1;UBERON:0010538,1.13e-08,1;UBERON:0003661,1.13e-08,1;UBERON:0010890,1.13e-08,1;UBERON:0002471,1.13e-08,1;UBERON:0001383,1.13e-08,1;UBERON:0004357,1.13e-08,1;UBERON:0004347,1.13e-08,1;UBERON:0005420,1.13e-08,1;UBERON:0005732,1.13e-08,1;UBERON:0010758,1.13e-08,1;UBERON:0010707,1.13e-08,1;UBERON:0000978,1.13e-08,1;UBERON:0002103,1.13e-08,1;UBERON:0001665,1.13e-08,1;UBERON:0003823,1.13e-08,1;UBERON:0000154,1.13e-08,1;UBERON:0010709,1.13e-08,1;UBERON:0005733,1.13e-08,1;UBERON:0005730,1.13e-08,1;UBERON:0000989,1.78e-08,1;UBERON:0008811,1.78e-08,1;UBERON:0006258,1.78e-08,1;UBERON:0005876,1.78e-08,1;UBERON:0004874,1.78e-08,1;UBERON:0007029,1.91e-08,1;UBERON:0003104,1.30e-07,160;UBERON:0009142,1.30e-07,160;UBERON:0002100,1.53e-07,199;UBERON:0000490,3.02e-07,148 | |||
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|short_description=p3@MYOD1 | |short_description=p3@MYOD1 | ||
}} | }} |
Latest revision as of 00:39, 17 September 2015
Short description: | p3@MYOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYOD1_5end |
Coexpression cluster: | C737_rhabdomyosarcoma_skeletal_mesenchymal_Skeletal_Pericytes_tongue_diaphragm |
Association with transcript: | -15bp_to_NM_002478, uc001mni.2_5end |
EntrezGene: | MYOD1 |
HGNC: | 7611 |
UniProt: | P15172 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.57e-39 | 9 |
skeletal muscle myoblast | 2.62e-30 | 4 |
muscle precursor cell | 3.52e-11 | 58 |
myoblast | 3.52e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.52e-11 | 58 |
skeletal muscle satellite cell | 1.26e-10 | 3 |
multinucleate cell | 6.65e-09 | 1 |
myotube | 6.65e-09 | 1 |