FFCP PHASE1:Hg19::chr15:25324203..25324208,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100033425 | |EntrezGene=100033425 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=33079 | |HGNC=33079 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000384408,NR_003328,uc001yxw.2_5end | |association_with_transcript=0bp_to_ENST00000384408,NR_003328,uc001yxw.2_5end | ||
|cluster_id=chr15:25324203..25324208,+ | |||
|description=CAGE_peak_1_at_SNORD116-13_5end | |description=CAGE_peak_1_at_SNORD116-13_5end | ||
|id=chr15:25324203..25324208,+ | |id=chr15:25324203..25324208,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.15e-35;5!CL:0000540;1.79e-17;6!CL:0000404;1.79e-17;6!CL:0002321;4.19e-12;15!CL:0000317;8.52e-07;2!CL:1000448;8.52e-07;2!CL:0002308;8.52e-07;2!CL:0002140;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.81e-36,5;CL:0000540,1.36e-17,6;CL:0000031,1.36e-17,6;CL:0000404,1.36e-17,6;CL:0000047,2.39e-13,8;CL:0000317,8.52e-07,2;CL:1000448,8.52e-07,2;CL:0002308,8.52e-07,2;CL:0002140,8.52e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000031;1.79e-17;6!UBERON:0005425;2.46e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.46e-12;1!UBERON:0001785;2.46e-12;1!UBERON:0002464;2.46e-12;1!UBERON:0004904;2.46e-12;1!UBERON:0001021;2.46e-12;1!UBERON:0002419;8.52e-07;2!UBERON:0003714;8.52e-07;2!UBERON:0005162;8.52e-07;2!UBERON:0000122;8.52e-07;2!UBERON:0007771;8.52e-07;2!UBERON:0003297;8.52e-07;2!UBERON:0001821;8.52e-07;2!UBERON:0003487;8.52e-07;2!UBERON:0001820;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.20e-12,1;UBERON:0001785,2.20e-12,1;UBERON:0002464,2.20e-12,1;UBERON:0004904,2.20e-12,1;UBERON:0001021,2.20e-12,1;UBERON:0003902,2.20e-12,1;UBERON:0005425,2.20e-12,1;UBERON:0003714,8.06e-07,2;UBERON:0005162,8.06e-07,2;UBERON:0000122,8.06e-07,2;UBERON:0002419,8.52e-07,2;UBERON:0007771,8.52e-07,2;UBERON:0003297,8.52e-07,2;UBERON:0001821,8.52e-07,2;UBERON:0003487,8.52e-07,2;UBERON:0001820,8.52e-07,2;UBERON:0005089,8.52e-07,2;UBERON:0005088,8.52e-07,2 | |||
|phase1_expression=0.363356758541113,0,0,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0.284338464974843,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0.535081656179426,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0.280901613404497,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0.375355559615893,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0.194874010322397,0,0,0,0.355009592516614,0,0,0,0.545492241181669,0.286804595389004,3.17131635936948,1.85541675650079,1.2781333715647,0.414644220061482,1.26160425437814,1.45990943630332,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.229628896329213,0.182091168006717,0,0,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0,0,0,0.895499018888713,0,0,0,0,0,0.103041011647722,0.27470839445503,0.082509499920588,0,1.30012049207304,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.537101224341368,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0.255225424989168,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0.699869440489966,0,0,1.08890984861323,0.0941438007767792,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.371606350251437,0.144269212976445,0.284567373393656,0.159426272728822,0,0.191505370132367,0.423347165447766,0,0,0.228234679033192,0.313359791546046,0,0.169291777801603,0,0.605399121573143,0,0,0.307240764308458,0.447352215784832,0,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.422250816255987,0,0,0.755798243562828,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.649376687132959,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0.21787692703798,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0.156980256395025,0.332423363800313,0,0,0,0,0.317873157960757,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0,0.611030144933625,0.296521128680622,0,0.208843899010911,0,0,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0.0882561266915003,0,0,0,0.126621591911757,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0.940568614814168,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0.0984274815147488,0.169346664131569,0,0.272406812223151,2.89355667237035,2.20063098555574,1.66176135211674,0,0,0.0607495566580247,0,0,0.209818352539992,0,0.35857467866569,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0.314408610199332,0,0.496166021811951,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0,0,0.500763722825999,0,0.110929051536852,0.0620964029413835,0.691743174681154,0.124980407962107,0,0,0,0,0.28984205722165,0.149254802886874,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.982829546539238,0,0,0,0,0.344429959321631,0,0,0.139879507719444,0,0,0,0.157265941855896,0.436838552768056,0.169732529954025,0,0.867550349813015,0,0,0,0,0.352675943690684,0.3062454773532,0.321146125482298,0,0.478901577171454,0,0,0.138314504928436,0,1.42769420259154,0,0.235939446695481,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0.351742488719241,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0.271878931907327,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0.23248285073625,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0.647428837187895,0.307988420568741,0,0,0,0,0.118920090777569,0.22589216407792,0,0.150962843566674,0.0771741581079447,0,2.35158648180761,0.490296643507811,0,0,0,0.8453114551668,0,0.0939839179798536,0.0644578879735772,0,0,0,0.240724100067505,0,0,0.143339583151451,0,0,0,0,0,0,0,0.883164973845552,2.62237372712869,0.126698501011437,0.61193297845189,0,0.0918948995348449,0,0,0,0,0.20686599172379,0,0,0.193766729508018,0.186224142887574,0,0.381882949668989,0.606351566874658,0,0.342233301085281,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0.363356758541113,0,0,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0.284338464974843,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.14828656316206,0.535081656179426,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,1.53316637465883,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0.280901613404497,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0.375355559615893,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0.194874010322397,0,0,0,0.355009592516614,0,0,0,0.545492241181669,0.286804595389004,3.17131635936948,1.85541675650079,1.2781333715647,0.414644220061482,1.26160425437814,1.45990943630332,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0.845302752556,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0.215714200818617,0.213455115606889,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.229628896329213,0.182091168006717,0,0,0,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0,0,0,0.895499018888713,0,0,0,0,0,0.103041011647722,0.27470839445503,0.082509499920588,0,1.30012049207304,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0.537101224341368,0.145016693914229,0.0852266274161009,0,0.165284915360978,0,0.255225424989168,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0.699869440489966,0,0,1.08890984861323,0.0941438007767792,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.371606350251437,0.144269212976445,0.284567373393656,0.159426272728822,0,0.191505370132367,0.423347165447766,0,0,0.228234679033192,0.313359791546046,0,0.169291777801603,0,0.605399121573143,0,0,0.307240764308458,0.447352215784832,0,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.422250816255987,0,0,0.755798243562828,0,0,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0.649376687132959,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0.21787692703798,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0.156980256395025,0.332423363800313,0,0,0,0,0.317873157960757,0.210998064528027,0.163232808159148,0.141353071433941,0,0,0,0.611030144933625,0.296521128680622,0,0.208843899010911,0,0,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0.0882561266915003,0,0,0,0.126621591911757,0,0.0801588202515337,0.213452994739353,0,0,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0.940568614814168,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0.0984274815147488,0.169346664131569,0,0.272406812223151,2.89355667237035,2.20063098555574,1.66176135211674,0,0,0.0607495566580247,0,0,0.209818352539992,0,0.35857467866569,0,0,0,0,0,0,0.326587360109409,0,0.164185041498678,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0.314408610199332,0,0.496166021811951,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0,0,0.500763722825999,0,0.110929051536852,0.0620964029413835,0.691743174681154,0.124980407962107,0,0,0,0,0.28984205722165,0.149254802886874,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.982829546539238,0,0,0,0,0.344429959321631,0,0,0.139879507719444,0,0,0,0.157265941855896,0.436838552768056,0.169732529954025,0,0.867550349813015,0,0,0,0,0.352675943690684,0.3062454773532,0.321146125482298,0,0.478901577171454,0,0,0.138314504928436,0,1.42769420259154,0,0.235939446695481,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0.351742488719241,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0.271878931907327,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0.23248285073625,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0,0.647428837187895,0.307988420568741,0,0,0,0,0.118920090777569,0.22589216407792,0,0.150962843566674,0.0771741581079447,0,2.35158648180761,0.490296643507811,0,0,0,0.8453114551668,0,0.0939839179798536,0.0644578879735772,0,0,0,0.240724100067505,0,0,0.143339583151451,0,0,0,0,0,0,0,0.883164973845552,2.62237372712869,0.126698501011437,0.61193297845189,0,0.0918948995348449,0,0,0,0,0.20686599172379,0,0,0.193766729508018,0.186224142887574,0,0.381882949668989,0.606351566874658,0,0.342233301085281,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p1@SNORD116-13 | |short_description=p1@SNORD116-13 | ||
}} | }} |
Latest revision as of 00:43, 17 September 2015
Short description: | p1@SNORD116-13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORD116-13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000384408, NR_003328, uc001yxw.2_5end |
EntrezGene: | SNORD116-13 |
HGNC: | 33079 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.81e-36 | 5 |
neuron | 1.36e-17 | 6 |
neuroblast | 1.36e-17 | 6 |
electrically signaling cell | 1.36e-17 | 6 |
neuronal stem cell | 2.39e-13 | 8 |
sebum secreting cell | 8.52e-07 | 2 |
epithelial cell of sweat gland | 8.52e-07 | 2 |
epithelial cell of skin gland | 8.52e-07 | 2 |
acinar cell of sebaceous gland | 8.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.20e-12 | 1 |
cranial nerve | 2.20e-12 | 1 |
nerve trunk | 2.20e-12 | 1 |
nerve connecting eye with brain | 2.20e-12 | 1 |
nerve | 2.20e-12 | 1 |
retinal neural layer | 2.20e-12 | 1 |
presumptive neural retina | 2.20e-12 | 1 |
neural tissue | 8.06e-07 | 2 |
multi cell component structure | 8.06e-07 | 2 |
neuron projection bundle | 8.06e-07 | 2 |
skin gland | 8.52e-07 | 2 |
epidermis gland | 8.52e-07 | 2 |
gland of integumental system | 8.52e-07 | 2 |
sebaceous gland | 8.52e-07 | 2 |
skin sebaceous gland | 8.52e-07 | 2 |
sweat gland | 8.52e-07 | 2 |
sweat gland placode | 8.52e-07 | 2 |
sebaceous gland placode | 8.52e-07 | 2 |