FFCP PHASE1:Hg19::chr10:129691129..129691146,-: Difference between revisions
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|id=chr10:129691129..129691146,-
|short_description=p3@CLRN3
|description=CAGE_peak_3_at_CLRN3_5end
|association_with_transcript=64bp_to_ENST00000368671,NM_152311,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=119467 | |EntrezGene=119467 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20795 | |HGNC=20795 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NCR9 | |UniProt=Q8NCR9 | ||
|association_with_transcript=64bp_to_ENST00000368671,NM_152311,uc001lka.1_5end | |||
|cluster_id=chr10:129691129..129691146,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_3_at_CLRN3_5end | |||
|id=chr10:129691129..129691146,- | |||
|ontology_enrichment_celltype=CL:0002178!6.22e-09!3;CL:0000181!2.97e-08!12;CL:0000417!2.97e-08!12;CL:0000668!2.97e-08!12;CL:0000414!2.97e-08!12;CL:0000412!2.97e-08!12;CL:0000182!2.97e-08!12;CL:0000223!7.98e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.73e-10;1!UBERON:0006242;1.73e-10;1!UBERON:0004161;6.78e-08;11!UBERON:0003104;3.95e-07;31!UBERON:0009497;9.43e-07;13 | |||
|ontology_enrichment_disease=DOID:3493!3.39e-13!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.03e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.13e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!8.50e-23!35;UBERON:0000160!6.39e-21!27;UBERON:0000059!2.08e-14!11;UBERON:0004921!1.19e-11!129;UBERON:0004185!1.19e-11!129;UBERON:0001155!1.26e-11!9;UBERON:0001007!2.35e-10!155;UBERON:0001555!2.35e-10!155;UBERON:0007026!2.35e-10!155;UBERON:0004119!3.52e-09!169;UBERON:0000925!3.52e-09!169;UBERON:0006595!3.52e-09!169;UBERON:0009854!4.81e-09!23;UBERON:0009497!2.86e-08!25;UBERON:0000015!2.86e-08!25;UBERON:0002423!2.86e-08!25;UBERON:0006235!2.86e-08!25;UBERON:0004161!2.86e-08!25;UBERON:0009856!6.17e-08!26;UBERON:0002107!8.25e-08!19;UBERON:0006925!8.25e-08!19;UBERON:0008836!8.25e-08!19;UBERON:0001154!1.18e-07!1;UBERON:0001153!1.18e-07!1;UBERON:0002426!2.83e-07!1;UBERON:0003831!2.83e-07!1;UBERON:0003898!2.83e-07!1;UBERON:0004830!2.83e-07!1;UBERON:0001774!2.83e-07!1;UBERON:0003830!2.83e-07!1;UBERON:0005175!2.83e-07!1;UBERON:0003897!2.83e-07!1;UBERON:0001103!2.83e-07!1;UBERON:0010084!2.83e-07!1;UBERON:0002108!5.66e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.25e-40;17!UBERON:0005409;1.56e-38;22!UBERON:0004921;2.36e-22;33!UBERON:0000059;4.97e-21;11!UBERON:0002108;1.49e-17;4!UBERON:0001155;7.93e-17;9!UBERON:0001154;1.73e-10;1!UBERON:0001153;1.73e-10;1!UBERON:0009854;1.73e-10;1!UBERON:0001007;6.07e-10;81!UBERON:0004907;2.83e-08;5!UBERON:0001555;4.47e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.20e-40,17;UBERON:0005409,6.53e-34,25;UBERON:0000059,4.77e-21,11;UBERON:0002108,1.49e-17,4;UBERON:0001155,7.62e-17,9;UBERON:0004921,7.23e-11,118;UBERON:0001154,1.57e-10,1;UBERON:0001153,1.57e-10,1;UBERON:0001045,1.57e-10,1;UBERON:0001007,5.79e-10,145;UBERON:0001555,5.79e-10,145;UBERON:0007026,5.79e-10,145;UBERON:0004119,8.16e-09,160;UBERON:0000925,8.16e-09,160;UBERON:0006595,8.16e-09,160;UBERON:0004907,2.73e-08,5 | |||
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|short_description=p3@CLRN3 | |||
}} | }} |
Latest revision as of 01:20, 17 September 2015
Short description: | p3@CLRN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLRN3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 64bp_to_ENST00000368671, NM_152311, uc001lka.1_5end |
EntrezGene: | CLRN3 |
HGNC: | 20795 |
UniProt: | Q8NCR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.20e-40 | 17 |
gastrointestinal system | 6.53e-34 | 25 |
large intestine | 4.77e-21 | 11 |
small intestine | 1.49e-17 | 4 |
colon | 7.62e-17 | 9 |
subdivision of digestive tract | 7.23e-11 | 118 |
vermiform appendix | 1.57e-10 | 1 |
caecum | 1.57e-10 | 1 |
midgut | 1.57e-10 | 1 |
digestive system | 5.79e-10 | 145 |
digestive tract | 5.79e-10 | 145 |
primitive gut | 5.79e-10 | 145 |
endoderm-derived structure | 8.16e-09 | 160 |
endoderm | 8.16e-09 | 160 |
presumptive endoderm | 8.16e-09 | 160 |
lower digestive tract | 2.73e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.13e-18 | 2 |