FFCP PHASE1:Hg19::chr3:185270325..185270338,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200879 | |EntrezGene=200879 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18483 | |HGNC=18483 | ||
|TSSclassifier=strong | |||
|UniProt=A2IBA6 | |UniProt=A2IBA6 | ||
|association_with_transcript=7bp_to_ENST00000424591_5end | |association_with_transcript=7bp_to_ENST00000424591_5end | ||
|cluster_id=chr3:185270325..185270338,- | |||
|coexpression_cluster_id=C4309 | |coexpression_cluster_id=C4309 | ||
|description=CAGE_peak_3_at_LIPH_5end | |description=CAGE_peak_3_at_LIPH_5end | ||
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|ontology_enrichment_celltype=CL:0000066!3.03e-11!254 | |ontology_enrichment_celltype=CL:0000066!3.03e-11!254 | ||
|ontology_enrichment_celltype_v019=CL:1000415;7.10e-08;2 | |ontology_enrichment_celltype_v019=CL:1000415;7.10e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:1000415,6.46e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0001041;2.13e-08;30!UBERON:0008947;4.16e-07;29!UBERON:0006595;5.17e-07;86 | |ontology_enrichment_development_v019=UBERON:0001041;2.13e-08;30!UBERON:0008947;4.16e-07;29!UBERON:0006595;5.17e-07;86 | ||
|ontology_enrichment_disease=DOID:305!1.53e-17!106;DOID:0050687!6.90e-12!143;DOID:162!1.82e-07!235;DOID:1749!2.13e-07!14;DOID:14566!7.04e-07!239 | |ontology_enrichment_disease=DOID:305!1.53e-17!106;DOID:0050687!6.90e-12!143;DOID:162!1.82e-07!235;DOID:1749!2.13e-07!14;DOID:14566!7.04e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:4929;7.71e-08;2!DOID:1749;2.10e-07;14!DOID:299;5.97e-07;25 | |ontology_enrichment_disease_v019=DOID:4929;7.71e-08;2!DOID:1749;2.10e-07;14!DOID:299;5.97e-07;25 | ||
|ontology_enrichment_disease_v019_2=DOID:305,9.96e-11,106;DOID:4929,6.68e-08,2;DOID:1749,2.69e-07,14;DOID:0050687,3.16e-07,143;DOID:299,5.79e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.39e-15!169;UBERON:0000925!7.39e-15!169;UBERON:0006595!7.39e-15!169;UBERON:0001007!1.26e-14!155;UBERON:0001555!1.26e-14!155;UBERON:0007026!1.26e-14!155;UBERON:0004921!4.77e-14!129;UBERON:0004185!4.77e-14!129;UBERON:0000077!4.83e-11!130;UBERON:0001041!6.07e-09!98;UBERON:0005911!7.00e-09!82;UBERON:0000464!4.69e-08!104;UBERON:0000466!5.78e-08!126;UBERON:0005409!2.23e-07!35;UBERON:0001004!2.79e-07!72;UBERON:0002294!2.84e-07!7;UBERON:0001173!2.84e-07!7;UBERON:0004912!2.84e-07!7;UBERON:0000481!2.90e-07!347;UBERON:0007023!6.82e-07!115;UBERON:0002048!9.14e-07!22;UBERON:0000117!9.14e-07!22;UBERON:0000171!9.14e-07!22;UBERON:0000170!9.14e-07!22;UBERON:0005597!9.14e-07!22;UBERON:0000118!9.14e-07!22 | |ontology_enrichment_uberon=UBERON:0004119!7.39e-15!169;UBERON:0000925!7.39e-15!169;UBERON:0006595!7.39e-15!169;UBERON:0001007!1.26e-14!155;UBERON:0001555!1.26e-14!155;UBERON:0007026!1.26e-14!155;UBERON:0004921!4.77e-14!129;UBERON:0004185!4.77e-14!129;UBERON:0000077!4.83e-11!130;UBERON:0001041!6.07e-09!98;UBERON:0005911!7.00e-09!82;UBERON:0000464!4.69e-08!104;UBERON:0000466!5.78e-08!126;UBERON:0005409!2.23e-07!35;UBERON:0001004!2.79e-07!72;UBERON:0002294!2.84e-07!7;UBERON:0001173!2.84e-07!7;UBERON:0004912!2.84e-07!7;UBERON:0000481!2.90e-07!347;UBERON:0007023!6.82e-07!115;UBERON:0002048!9.14e-07!22;UBERON:0000117!9.14e-07!22;UBERON:0000171!9.14e-07!22;UBERON:0000170!9.14e-07!22;UBERON:0005597!9.14e-07!22;UBERON:0000118!9.14e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;8.59e-12;7!UBERON:0001173;8.59e-12;7!UBERON:0002110;8.12e-11;3!UBERON:0004921;3.00e-09;33!UBERON:0002048;8.99e-08;22!UBERON:0000117;8.99e-08;22!UBERON:0000171;8.99e-08;22!UBERON:0000170;8.99e-08;22!UBERON:0005409;1.40e-07;22!UBERON:0006562;3.37e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002294;8.59e-12;7!UBERON:0001173;8.59e-12;7!UBERON:0002110;8.12e-11;3!UBERON:0004921;3.00e-09;33!UBERON:0002048;8.99e-08;22!UBERON:0000117;8.99e-08;22!UBERON:0000171;8.99e-08;22!UBERON:0000170;8.99e-08;22!UBERON:0005409;1.40e-07;22!UBERON:0006562;3.37e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,9.13e-13,145;UBERON:0001555,9.13e-13,145;UBERON:0007026,9.13e-13,145;UBERON:0004921,3.08e-12,118;UBERON:0002110,7.07e-11,3;UBERON:0006242,7.07e-11,3;UBERON:0004119,7.26e-11,160;UBERON:0000925,7.26e-11,160;UBERON:0006595,7.26e-11,160;UBERON:0002294,4.21e-09,9;UBERON:0001173,4.21e-09,9;UBERON:0004912,4.21e-09,9;UBERON:0005409,1.13e-08,25;UBERON:0005911,5.61e-08,82;UBERON:0002048,7.43e-08,22;UBERON:0000117,7.43e-08,22;UBERON:0000171,7.43e-08,22;UBERON:0000170,7.43e-08,22;UBERON:0005597,7.43e-08,22;UBERON:0000118,7.43e-08,22;UBERON:0001041,2.29e-07,87;UBERON:0005178,2.90e-07,34;UBERON:0002224,2.90e-07,34;UBERON:0005181,5.31e-07,35 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,0.821005894499457,0.944529375764151,0,0.383829398097213,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.982343066232845,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,2.25095607382472,0.286836620748814,0,0,0,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.330881918197182,0,0,0.404493924480493,0,0,0,0,0,0,0,0,0,0,4.91953754172454,0.686271241194102,0.109750285408626,1.1240175325762,0,0.0925884451585296,0,0,1.44331342025273,0,0.587043471179108,0,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22015127883421,1.74306691720059,0.399891964728228,0,0,0,0.958499421966331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,1.32945394550784,0,1.28913384510255,0,0,0,0,0.462092022626489,0,0,1.37217117560738,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.192190067365106,0,0.10115778085555,0,0,0,0.616067160352178,0.532306030317022,0,0.18532421910392,2.43312307461385,0,0,0,0,0,0,0,0,0,0,0.606547444719948,1.58510321173008,0.842516912477962,0,0.487426979262569,0,0,0,0,0,1.32687795048244,2.19225442626881,0,0,0.608731130888112,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0.886860307073351,0.229723400206959,1.01489521846434,0.764637207142375,0,0.238231775457789,0,1.29694662238543,0,1.58625035258854,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.99921590399346,0,1.30998378285754,0.146508179271894,0,0.780103689942349,0,0.95497793895076,0.890894042497916,3.07160702099232,0,0,0.445234820091624,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0.102268682502155,1.10776324914963,0,0.449341755736634,2.14825409610731,0,0.789147245095469,0,0,0,0,0,0,0,0,0.455173793141999,1.77977555204936,0.709163045303809,0,0,0,0,0,0,0,0,0,0.21787692703798,1.95193241990045,0.307801034015188,0.113942055847001,0.23056390438806,0.359030577639089,0,0,0,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0.158936578980379,0.210998064528027,0.489698424477443,0.848118428603645,0,1.99052386215701,0.884575645033392,3.66618086960175,0,0,0,0.067401132980677,0,0,0,1.56531695145672,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0.414752765588989,0,0.330991955875499,0,0,0.284609546029793,0,0,3.03776431984571,0.870592065804026,0.17472666824203,0,0.774050650312681,0.730893170861856,0.410577285266046,1.74580229679155,0,0.451961481561065,0,0,0.0633107959558787,3.71547627196126,3.12619398980981,2.34798294213288,0,2.88180834308212,0,0,0.576219191952599,0.372757606696298,0.235694034616795,0,0.209205692624666,0,0,0,0,0,0.859530882839914,0,0,0.229160424011684,0,2.1964690054889,0,0.223171457441873,0,0.360299883542404,0,0,0,0,1.08270229666224,0.338693328263138,0,0.408610218334727,0,0,0,0,0,0.121499113316049,0.670869375198532,0.315222829196793,0.209818352539992,0.316801009558219,1.25501137532991,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0,0,0.146552233678082,0,0,0,1.88195521672762,7.75296524548339,3.41719720216623,2.35806457649499,1.24271716604159,0,1.18566979138767,0,1.27668251554036,0,0,0,0,0.785270481251171,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0.489473409012935,0,0,0,0.706756583783524,0,0,0,0.345430341731199,3.03859956177382,0,0,0,0,0,0.491545817507439,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11542187833102,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0,0,0,0.781514011233092,0,1.47394725759087,2.66140955190681,0,0.781078098613847,0,0.126831620387814,0,0.548257766857182,0.496211178389294,0,1.27762427639595,0,0,0,0.682986574053893,0.266107110487916,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0.111231401892069,0.39246546425257,0.157115589916002,1.68163297988273,0,0,0.9555033757741,0.500335809236594,0,0.116241425368125,0,0,0.207216164163037,0.3414369541879,0,2.15113679410139,0,0,0.423387050190929,0.22910686854405,0,0,0,0.392600934460972,3.04794812455674,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0.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| ||
|short_description=p3@LIPH | |short_description=p3@LIPH | ||
}} | }} |
Latest revision as of 03:48, 17 September 2015
Short description: | p3@LIPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LIPH_5end |
Coexpression cluster: | C4309_splenic_tubular_lung_signet_Intestinal_gall_throat |
Association with transcript: | 7bp_to_ENST00000424591_5end |
EntrezGene: | LIPH |
HGNC: | 18483 |
UniProt: | A2IBA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 6.46e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
digestive system | 9.13e-13 | 145 |
digestive tract | 9.13e-13 | 145 |
primitive gut | 9.13e-13 | 145 |
subdivision of digestive tract | 3.08e-12 | 118 |
gallbladder | 7.07e-11 | 3 |
gall bladder primordium | 7.07e-11 | 3 |
endoderm-derived structure | 7.26e-11 | 160 |
endoderm | 7.26e-11 | 160 |
presumptive endoderm | 7.26e-11 | 160 |
biliary system | 4.21e-09 | 9 |
biliary tree | 4.21e-09 | 9 |
biliary bud | 4.21e-09 | 9 |
gastrointestinal system | 1.13e-08 | 25 |
endo-epithelium | 5.61e-08 | 82 |
lung | 7.43e-08 | 22 |
respiratory tube | 7.43e-08 | 22 |
respiration organ | 7.43e-08 | 22 |
pair of lungs | 7.43e-08 | 22 |
lung primordium | 7.43e-08 | 22 |
lung bud | 7.43e-08 | 22 |
foregut | 2.29e-07 | 87 |
thoracic cavity element | 2.90e-07 | 34 |
thoracic cavity | 2.90e-07 | 34 |
thoracic segment organ | 5.31e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.96e-11 | 106 |
tubular adenocarcinoma | 6.68e-08 | 2 |
squamous cell carcinoma | 2.69e-07 | 14 |
cell type cancer | 3.16e-07 | 143 |
adenocarcinoma | 5.79e-07 | 25 |