FFCP PHASE1:Hg19::chr1:152957724..152957751,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6698 | |EntrezGene=6698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11259 | |HGNC=11259 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_BC111839_5end | |association_with_transcript=18bp_to_BC111839_5end | ||
|cluster_id=chr1:152957724..152957751,+ | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_2_at_SPRR1A_5end | |description=CAGE_peak_2_at_SPRR1A_5end | ||
|id=chr1:152957724..152957751,+ | |id=chr1:152957724..152957751,+ | ||
|ontology_enrichment_celltype=CL:0000622!9.35e-24!5;CL:0002076!4.18e-23!43;CL:0000154!9.24e-20!6;CL:0002251!4.57e-16!21;CL:0000223!7.25e-16!59;CL:0002623!1.11e-14!3;CL:0002621!1.68e-14!3;CL:0000150!4.34e-13!9;CL:0002159!2.20e-12!13;CL:0002368!1.02e-11!13;CL:0000244!3.78e-11!4;CL:0000731!3.78e-11!4;CL:0000317!7.77e-11!2;CL:1000448!7.77e-11!2;CL:0002308!7.77e-11!2;CL:0002140!7.77e-11!2;CL:0000575!5.33e-10!2;CL:0000362!1.10e-09!8;CL:0000240!2.12e-07!6;CL:0000311!2.12e-07!6;CL:0000079!2.12e-07!6;CL:0000237!2.12e-07!6;CL:0000036!2.12e-07!6;CL:0000357!2.12e-07!6;CL:0000114!2.12e-07!6;CL:0002328!5.96e-07!3 | |ontology_enrichment_celltype=CL:0000622!9.35e-24!5;CL:0002076!4.18e-23!43;CL:0000154!9.24e-20!6;CL:0002251!4.57e-16!21;CL:0000223!7.25e-16!59;CL:0002623!1.11e-14!3;CL:0002621!1.68e-14!3;CL:0000150!4.34e-13!9;CL:0002159!2.20e-12!13;CL:0002368!1.02e-11!13;CL:0000244!3.78e-11!4;CL:0000731!3.78e-11!4;CL:0000317!7.77e-11!2;CL:1000448!7.77e-11!2;CL:0002308!7.77e-11!2;CL:0002140!7.77e-11!2;CL:0000575!5.33e-10!2;CL:0000362!1.10e-09!8;CL:0000240!2.12e-07!6;CL:0000311!2.12e-07!6;CL:0000079!2.12e-07!6;CL:0000237!2.12e-07!6;CL:0000036!2.12e-07!6;CL:0000357!2.12e-07!6;CL:0000114!2.12e-07!6;CL:0002328!5.96e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000622;3.42e-32;5!CL:0000154;6.84e-27;6!CL:0000317;4.03e-21;2!CL:1000448;4.03e-21;2!CL:0002308;4.03e-21;2!CL:0002140;4.03e-21;2!CL:0000150;4.89e-18;9!CL:0002623;3.06e-14;3!CL:0002621;5.39e-14;3!CL:0000244;9.89e-11;4!CL:0000731;9.89e-11;4!CL:0000362;1.45e-10;9!CL:0002251;4.10e-08;20!CL:0002159;5.74e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,4.72e-32,5;CL:0000154,8.94e-27,6;CL:0000317,3.84e-21,2;CL:1000448,3.84e-21,2;CL:0002308,3.84e-21,2;CL:0002140,3.84e-21,2;CL:0000150,5.83e-18,9;CL:0002623,4.14e-14,3;CL:0002621,5.40e-14,3;CL:0000244,8.53e-11,4;CL:0000731,8.53e-11,4;CL:0000362,1.43e-10,9;CL:0002251,4.46e-08,20;CL:0002159,5.68e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.57e-12;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;2.18e-11;1!DOID:3149;2.18e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.42e-11,1;DOID:3149,2.42e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000166!2.03e-20!21;UBERON:0003102!2.58e-20!95;UBERON:0000161!2.29e-19!35;UBERON:0000165!5.88e-18!28;UBERON:0000930!5.88e-18!28;UBERON:0004119!1.14e-14!169;UBERON:0000925!1.14e-14!169;UBERON:0006595!1.14e-14!169;UBERON:0001949!1.68e-14!3;UBERON:0001004!1.69e-14!72;UBERON:0001444!1.65e-13!48;UBERON:0002419!7.77e-11!2;UBERON:0007771!7.77e-11!2;UBERON:0003297!7.77e-11!2;UBERON:0001821!7.77e-11!2;UBERON:0003487!7.77e-11!2;UBERON:0001820!7.77e-11!2;UBERON:0005089!7.77e-11!2;UBERON:0005088!7.77e-11!2;UBERON:0001007!4.23e-09!155;UBERON:0001555!4.23e-09!155;UBERON:0007026!4.23e-09!155;UBERON:0000078!5.07e-09!18;UBERON:0000365!5.24e-09!5;UBERON:0001003!2.68e-08!14;UBERON:0007376!2.68e-08!14;UBERON:0007383!2.68e-08!14;UBERON:0005910!1.42e-07!6;UBERON:0001044!1.45e-07!6;UBERON:0003293!1.45e-07!6;UBERON:0003294!1.45e-07!6;UBERON:0010047!1.45e-07!6;UBERON:0000167!1.45e-07!6;UBERON:0001723!1.78e-07!3;UBERON:0001033!1.78e-07!3;UBERON:0010056!1.78e-07!3;UBERON:0004815!5.96e-07!3;UBERON:0002031!5.96e-07!3;UBERON:0000065!7.92e-07!53 | |ontology_enrichment_uberon=UBERON:0000166!2.03e-20!21;UBERON:0003102!2.58e-20!95;UBERON:0000161!2.29e-19!35;UBERON:0000165!5.88e-18!28;UBERON:0000930!5.88e-18!28;UBERON:0004119!1.14e-14!169;UBERON:0000925!1.14e-14!169;UBERON:0006595!1.14e-14!169;UBERON:0001949!1.68e-14!3;UBERON:0001004!1.69e-14!72;UBERON:0001444!1.65e-13!48;UBERON:0002419!7.77e-11!2;UBERON:0007771!7.77e-11!2;UBERON:0003297!7.77e-11!2;UBERON:0001821!7.77e-11!2;UBERON:0003487!7.77e-11!2;UBERON:0001820!7.77e-11!2;UBERON:0005089!7.77e-11!2;UBERON:0005088!7.77e-11!2;UBERON:0001007!4.23e-09!155;UBERON:0001555!4.23e-09!155;UBERON:0007026!4.23e-09!155;UBERON:0000078!5.07e-09!18;UBERON:0000365!5.24e-09!5;UBERON:0001003!2.68e-08!14;UBERON:0007376!2.68e-08!14;UBERON:0007383!2.68e-08!14;UBERON:0005910!1.42e-07!6;UBERON:0001044!1.45e-07!6;UBERON:0003293!1.45e-07!6;UBERON:0003294!1.45e-07!6;UBERON:0010047!1.45e-07!6;UBERON:0000167!1.45e-07!6;UBERON:0001723!1.78e-07!3;UBERON:0001033!1.78e-07!3;UBERON:0010056!1.78e-07!3;UBERON:0004815!5.96e-07!3;UBERON:0002031!5.96e-07!3;UBERON:0000065!7.92e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;4.03e-21;2!UBERON:0007771;4.03e-21;2!UBERON:0003297;4.03e-21;2!UBERON:0001821;4.03e-21;2!UBERON:0003487;4.03e-21;2!UBERON:0001820;4.03e-21;2!UBERON:0000165;9.56e-17;28!UBERON:0001723;1.98e-14;3!UBERON:0001033;1.98e-14;3!UBERON:0001949;5.39e-14;3!UBERON:0000486;2.87e-13;12!UBERON:0000161;5.69e-13;19!UBERON:0000166;5.69e-13;19!UBERON:0005795;1.31e-11;1!UBERON:0002372;1.45e-11;1!UBERON:0001961;1.45e-11;1!UBERON:0001744;1.45e-11;1!UBERON:0001042;1.45e-11;1!UBERON:0001735;1.45e-11;1!UBERON:0007029;4.01e-11;1!UBERON:0010371;4.12e-11;31!UBERON:0000014;7.34e-11;4!UBERON:0001003;7.99e-11;15!UBERON:0007376;7.99e-11;15!UBERON:0000365;9.20e-09;5!UBERON:0001044;1.45e-07;6!UBERON:0003293;1.45e-07;6!UBERON:0003294;1.45e-07;6!UBERON:0010047;1.45e-07;6!UBERON:0003408;1.45e-07;6!UBERON:0000167;1.45e-07;6!UBERON:0005910;1.92e-07;6!UBERON:0001041;4.87e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,2.09e-21,22;UBERON:0002419,3.84e-21,2;UBERON:0007771,3.84e-21,2;UBERON:0003297,3.84e-21,2;UBERON:0001821,3.84e-21,2;UBERON:0003487,3.84e-21,2;UBERON:0001820,3.84e-21,2;UBERON:0005089,3.84e-21,2;UBERON:0005088,3.84e-21,2;UBERON:0000165,4.32e-16,29;UBERON:0000930,4.32e-16,29;UBERON:0001723,2.12e-14,3;UBERON:0001033,2.12e-14,3;UBERON:0010056,2.12e-14,3;UBERON:0001949,5.40e-14,3;UBERON:0000161,7.78e-13,36;UBERON:0003102,1.30e-12,99;UBERON:0002372,1.45e-11,1;UBERON:0001961,1.45e-11,1;UBERON:0001744,1.45e-11,1;UBERON:0001735,1.45e-11,1;UBERON:0007029,2.68e-11,1;UBERON:0000014,6.33e-11,4;UBERON:0001003,7.11e-11,15;UBERON:0007376,7.11e-11,15;UBERON:0007383,7.11e-11,15;UBERON:0001042,1.11e-09,10;UBERON:0009145,1.11e-09,10;UBERON:0000153,2.40e-09,62;UBERON:0007811,2.40e-09,62;UBERON:0001444,3.00e-09,49;UBERON:0006562,7.57e-09,11;UBERON:0000365,8.17e-09,5;UBERON:0000033,5.27e-08,56;UBERON:0001004,1.20e-07,74;UBERON:0001044,1.68e-07,6;UBERON:0003293,1.68e-07,6;UBERON:0003294,1.68e-07,6;UBERON:0010047,1.68e-07,6;UBERON:0000167,1.68e-07,6;UBERON:0005910,1.74e-07,6 | |||
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|short_description=p2@SPRR1A | |short_description=p2@SPRR1A | ||
}} | }} |
Latest revision as of 04:03, 17 September 2015
Short description: | p2@SPRR1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPRR1A_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 18bp_to_BC111839_5end |
EntrezGene: | SPRR1A |
HGNC: | 11259 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 4.72e-32 | 5 |
protein secreting cell | 8.94e-27 | 6 |
sebum secreting cell | 3.84e-21 | 2 |
epithelial cell of sweat gland | 3.84e-21 | 2 |
epithelial cell of skin gland | 3.84e-21 | 2 |
acinar cell of sebaceous gland | 3.84e-21 | 2 |
glandular epithelial cell | 5.83e-18 | 9 |
acinar cell of salivary gland | 4.14e-14 | 3 |
gingival epithelial cell | 5.40e-14 | 3 |
transitional epithelial cell | 8.53e-11 | 4 |
urothelial cell | 8.53e-11 | 4 |
epidermal cell | 1.43e-10 | 9 |
epithelial cell of alimentary canal | 4.46e-08 | 20 |
general ecto-epithelial cell | 5.68e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.42e-11 | 1 |
keratoacanthoma | 2.42e-11 | 1 |