FFCP PHASE1:Hg19::chr5:175976324..175976365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54825 | |EntrezGene=54825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18231 | |HGNC=18231 | ||
|TSSclassifier=strong | |||
|UniProt=A1L3U4,Q9BYE9 | |UniProt=A1L3U4,Q9BYE9 | ||
|association_with_transcript=0bp_to_NM_017675,uc003mem.1_5end | |association_with_transcript=0bp_to_NM_017675,uc003mem.1_5end | ||
|cluster_id=chr5:175976324..175976365,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_CDHR2_5end | |description=CAGE_peak_1_at_CDHR2_5end | ||
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|ontology_enrichment_celltype=CL:0000181!4.37e-20!12;CL:0000417!4.37e-20!12;CL:0000668!4.37e-20!12;CL:0000414!4.37e-20!12;CL:0000412!4.37e-20!12;CL:0000182!4.37e-20!12;CL:0000223!3.62e-11!59 | |ontology_enrichment_celltype=CL:0000181!4.37e-20!12;CL:0000417!4.37e-20!12;CL:0000668!4.37e-20!12;CL:0000414!4.37e-20!12;CL:0000412!4.37e-20!12;CL:0000182!4.37e-20!12;CL:0000223!3.62e-11!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.87e-24;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.87e-24;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.92e-24,12;CL:0000223,5.05e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.20e-26;11!UBERON:0009497;2.01e-22;13!UBERON:0003104;1.93e-14;31!UBERON:0006242;1.51e-07;1!UBERON:0001045;2.92e-07;1!UBERON:0001041;7.14e-07;30 | |ontology_enrichment_development_v019=UBERON:0004161;1.20e-26;11!UBERON:0009497;2.01e-22;13!UBERON:0003104;1.93e-14;31!UBERON:0006242;1.51e-07;1!UBERON:0001045;2.92e-07;1!UBERON:0001041;7.14e-07;30 | ||
|ontology_enrichment_disease=DOID:3493!1.77e-08!2;DOID:4929!2.23e-08!2;DOID:299!3.02e-08!25;DOID:305!2.66e-07!106 | |ontology_enrichment_disease=DOID:3493!1.77e-08!2;DOID:4929!2.23e-08!2;DOID:299!3.02e-08!25;DOID:305!2.66e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000160;1.14e-26;17!UBERON:0005409;2.13e-25;22!UBERON:0002107;8.63e-25;19!UBERON:0006925;8.63e-25;19!UBERON:0002423;7.18e-23;25!UBERON:0004921;1.61e-15;33!UBERON:0002365;3.29e-14;31!UBERON:0002330;3.29e-14;31!UBERON:0000059;5.53e-14;11!UBERON:0002368;1.88e-12;33!UBERON:0001007;1.97e-12;81!UBERON:0002108;2.75e-12;4!UBERON:0001155;2.67e-11;9!UBERON:0005172;3.83e-09;52!UBERON:0005173;3.83e-09;52!UBERON:0000949;5.64e-09;43!UBERON:0002417;6.79e-08;58!UBERON:0000916;6.79e-08;58!UBERON:0001154;2.92e-07;1!UBERON:0001153;2.92e-07;1!UBERON:0009854;2.92e-07;1!UBERON:0001301;3.62e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000160;1.14e-26;17!UBERON:0005409;2.13e-25;22!UBERON:0002107;8.63e-25;19!UBERON:0006925;8.63e-25;19!UBERON:0002423;7.18e-23;25!UBERON:0004921;1.61e-15;33!UBERON:0002365;3.29e-14;31!UBERON:0002330;3.29e-14;31!UBERON:0000059;5.53e-14;11!UBERON:0002368;1.88e-12;33!UBERON:0001007;1.97e-12;81!UBERON:0002108;2.75e-12;4!UBERON:0001155;2.67e-11;9!UBERON:0005172;3.83e-09;52!UBERON:0005173;3.83e-09;52!UBERON:0000949;5.64e-09;43!UBERON:0002417;6.79e-08;58!UBERON:0000916;6.79e-08;58!UBERON:0001154;2.92e-07;1!UBERON:0001153;2.92e-07;1!UBERON:0009854;2.92e-07;1!UBERON:0001301;3.62e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.13e-26,17;UBERON:0009854,6.82e-25,23;UBERON:0002107,8.75e-25,19;UBERON:0006925,8.75e-25,19;UBERON:0008836,8.75e-25,19;UBERON:0009497,7.26e-23,25;UBERON:0000015,7.26e-23,25;UBERON:0002423,7.26e-23,25;UBERON:0006235,7.26e-23,25;UBERON:0004161,7.26e-23,25;UBERON:0005409,2.95e-22,25;UBERON:0009856,8.08e-22,26;UBERON:0008835,3.31e-21,22;UBERON:0003894,3.31e-21,22;UBERON:0007499,1.74e-18,25;UBERON:0005172,1.66e-16,54;UBERON:0005173,1.66e-16,54;UBERON:0004921,8.33e-15,118;UBERON:0002365,1.27e-14,31;UBERON:0002330,1.27e-14,31;UBERON:0002417,1.34e-14,60;UBERON:0000916,1.34e-14,60;UBERON:0000059,5.45e-14,11;UBERON:0001007,8.62e-13,145;UBERON:0001555,8.62e-13,145;UBERON:0007026,8.62e-13,145;UBERON:0002368,8.76e-13,35;UBERON:0002108,2.75e-12,4;UBERON:0003929,1.12e-11,54;UBERON:0001155,2.60e-11,9;UBERON:0004119,3.27e-11,160;UBERON:0000925,3.27e-11,160;UBERON:0006595,3.27e-11,160;UBERON:0000949,1.29e-09,45;UBERON:0005177,1.18e-07,101;UBERON:0001154,2.83e-07,1;UBERON:0001153,2.83e-07,1;UBERON:0001045,2.83e-07,1;UBERON:0001301,3.40e-07,1;UBERON:0005911,5.16e-07,82;UBERON:0002530,5.42e-07,59;UBERON:0011216,8.71e-07,223 | |||
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|short_description=p1@CDHR2 | |short_description=p1@CDHR2 | ||
}} | }} |
Latest revision as of 04:41, 17 September 2015
Short description: | p1@CDHR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDHR2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_NM_017675, uc003mem.1_5end |
EntrezGene: | CDHR2 |
HGNC: | 18231 |
UniProt: | A1L3U4Q9BYE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.92e-24 | 12 |
endodermal cell | 5.05e-07 | 58 |