FFCP PHASE1:Hg19::chr3:186435111..186435126,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3827 | |EntrezGene=3827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6383 | |HGNC=6383 | ||
|TSSclassifier=strong | |||
|UniProt=P01042 | |UniProt=P01042 | ||
|association_with_transcript=0bp_to_ENST00000265023,uc003fqr.2,uc011bsa.1_5end | |association_with_transcript=0bp_to_ENST00000265023,uc003fqr.2,uc011bsa.1_5end | ||
|cluster_id=chr3:186435111..186435126,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_3_at_KNG1_5end | |description=CAGE_peak_3_at_KNG1_5end | ||
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|ontology_enrichment_celltype=CL:0000181!1.08e-28!12;CL:0000417!1.08e-28!12;CL:0000668!1.08e-28!12;CL:0000414!1.08e-28!12;CL:0000412!1.08e-28!12;CL:0000182!1.08e-28!12;CL:0000223!3.57e-11!59 | |ontology_enrichment_celltype=CL:0000181!1.08e-28!12;CL:0000417!1.08e-28!12;CL:0000668!1.08e-28!12;CL:0000414!1.08e-28!12;CL:0000412!1.08e-28!12;CL:0000182!1.08e-28!12;CL:0000223!3.57e-11!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.05e-20;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.05e-20;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.05e-20,12;CL:0000223,3.24e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.66e-13;11!UBERON:0003104;9.77e-13;31!UBERON:0009497;3.82e-11;13!CL:0000223;1.65e-07;58!UBERON:0003918;4.52e-07;10!UBERON:0007687;4.52e-07;10 | |ontology_enrichment_development_v019=UBERON:0004161;4.66e-13;11!UBERON:0003104;9.77e-13;31!UBERON:0009497;3.82e-11;13!CL:0000223;1.65e-07;58!UBERON:0003918;4.52e-07;10!UBERON:0007687;4.52e-07;10 | ||
|ontology_enrichment_disease=DOID:178!9.25e-07!1;DOID:326!9.25e-07!1;DOID:3978!9.25e-07!1;DOID:3394!9.25e-07!1;DOID:5844!9.25e-07!1 | |ontology_enrichment_disease=DOID:178!9.25e-07!1;DOID:326!9.25e-07!1;DOID:3978!9.25e-07!1;DOID:3394!9.25e-07!1;DOID:5844!9.25e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!2.12e-33!26;UBERON:0008835!1.09e-28!22;UBERON:0003894!1.09e-28!22;UBERON:0002107!8.40e-28!19;UBERON:0006925!8.40e-28!19;UBERON:0008836!8.40e-28!19;UBERON:0009854!2.39e-27!23;UBERON:0007499!5.47e-25!25;UBERON:0009497!5.47e-25!25;UBERON:0000015!5.47e-25!25;UBERON:0002423!5.47e-25!25;UBERON:0006235!5.47e-25!25;UBERON:0004161!5.47e-25!25;UBERON:0009856!6.05e-24!26;UBERON:0003929!9.54e-23!54;UBERON:0002368!1.92e-20!35;UBERON:0002365!2.55e-16!31;UBERON:0002330!2.55e-16!31;UBERON:0000949!2.32e-15!45;UBERON:0005172!1.35e-14!55;UBERON:0005173!1.35e-14!55;UBERON:0000200!3.58e-14!6;UBERON:0005911!8.55e-14!82;UBERON:0002530!3.17e-13!59;UBERON:0002417!6.77e-13!61;UBERON:0000916!6.77e-13!61;UBERON:0001950!2.31e-11!20;UBERON:0001869!2.45e-11!32;UBERON:0001893!1.32e-10!34;UBERON:0002619!2.66e-10!22;UBERON:0004921!7.67e-10!129;UBERON:0004185!7.67e-10!129;UBERON:0000956!5.14e-09!25;UBERON:0000203!5.14e-09!25;UBERON:0000025!1.17e-08!194;UBERON:0002791!1.17e-08!33;UBERON:0002780!1.34e-08!41;UBERON:0001890!1.34e-08!41;UBERON:0006240!1.34e-08!41;UBERON:0000077!1.37e-08!130;UBERON:0002020!2.23e-08!34;UBERON:0003528!2.23e-08!34;UBERON:0003080!2.28e-08!42;UBERON:0001041!3.86e-08!98;UBERON:0000481!5.80e-08!347;UBERON:0002771!6.28e-08!3;UBERON:0001007!1.42e-07!155;UBERON:0001555!1.42e-07!155;UBERON:0007026!1.42e-07!155;UBERON:0004177!2.02e-07!7;UBERON:0007023!2.81e-07!115;UBERON:0000477!2.92e-07!286;UBERON:0001049!3.17e-07!57;UBERON:0005068!3.17e-07!57;UBERON:0006241!3.17e-07!57;UBERON:0007135!3.17e-07!57;UBERON:0000483!4.41e-07!309;UBERON:0000119!5.82e-07!312;UBERON:0002616!6.26e-07!59;UBERON:0004111!6.55e-07!241;UBERON:0000490!7.58e-07!138;UBERON:0002146!8.75e-07!1;UBERON:0005623!8.75e-07!1 | |ontology_enrichment_uberon=UBERON:0005057!2.12e-33!26;UBERON:0008835!1.09e-28!22;UBERON:0003894!1.09e-28!22;UBERON:0002107!8.40e-28!19;UBERON:0006925!8.40e-28!19;UBERON:0008836!8.40e-28!19;UBERON:0009854!2.39e-27!23;UBERON:0007499!5.47e-25!25;UBERON:0009497!5.47e-25!25;UBERON:0000015!5.47e-25!25;UBERON:0002423!5.47e-25!25;UBERON:0006235!5.47e-25!25;UBERON:0004161!5.47e-25!25;UBERON:0009856!6.05e-24!26;UBERON:0003929!9.54e-23!54;UBERON:0002368!1.92e-20!35;UBERON:0002365!2.55e-16!31;UBERON:0002330!2.55e-16!31;UBERON:0000949!2.32e-15!45;UBERON:0005172!1.35e-14!55;UBERON:0005173!1.35e-14!55;UBERON:0000200!3.58e-14!6;UBERON:0005911!8.55e-14!82;UBERON:0002530!3.17e-13!59;UBERON:0002417!6.77e-13!61;UBERON:0000916!6.77e-13!61;UBERON:0001950!2.31e-11!20;UBERON:0001869!2.45e-11!32;UBERON:0001893!1.32e-10!34;UBERON:0002619!2.66e-10!22;UBERON:0004921!7.67e-10!129;UBERON:0004185!7.67e-10!129;UBERON:0000956!5.14e-09!25;UBERON:0000203!5.14e-09!25;UBERON:0000025!1.17e-08!194;UBERON:0002791!1.17e-08!33;UBERON:0002780!1.34e-08!41;UBERON:0001890!1.34e-08!41;UBERON:0006240!1.34e-08!41;UBERON:0000077!1.37e-08!130;UBERON:0002020!2.23e-08!34;UBERON:0003528!2.23e-08!34;UBERON:0003080!2.28e-08!42;UBERON:0001041!3.86e-08!98;UBERON:0000481!5.80e-08!347;UBERON:0002771!6.28e-08!3;UBERON:0001007!1.42e-07!155;UBERON:0001555!1.42e-07!155;UBERON:0007026!1.42e-07!155;UBERON:0004177!2.02e-07!7;UBERON:0007023!2.81e-07!115;UBERON:0000477!2.92e-07!286;UBERON:0001049!3.17e-07!57;UBERON:0005068!3.17e-07!57;UBERON:0006241!3.17e-07!57;UBERON:0007135!3.17e-07!57;UBERON:0000483!4.41e-07!309;UBERON:0000119!5.82e-07!312;UBERON:0002616!6.26e-07!59;UBERON:0004111!6.55e-07!241;UBERON:0000490!7.58e-07!138;UBERON:0002146!8.75e-07!1;UBERON:0005623!8.75e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.04e-28;19!UBERON:0006925;1.04e-28;19!UBERON:0002423;8.45e-22;25!UBERON:0002365;1.30e-17;31!UBERON:0002330;1.30e-17;31!UBERON:0002368;3.09e-15;33!UBERON:0005172;2.04e-13;52!UBERON:0005173;2.04e-13;52!UBERON:0000949;1.02e-10;43!UBERON:0002417;6.94e-10;58!UBERON:0000916;6.94e-10;58!UBERON:0002530;1.57e-07;57 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.04e-28;19!UBERON:0006925;1.04e-28;19!UBERON:0002423;8.45e-22;25!UBERON:0002365;1.30e-17;31!UBERON:0002330;1.30e-17;31!UBERON:0002368;3.09e-15;33!UBERON:0005172;2.04e-13;52!UBERON:0005173;2.04e-13;52!UBERON:0000949;1.02e-10;43!UBERON:0002417;6.94e-10;58!UBERON:0000916;6.94e-10;58!UBERON:0002530;1.57e-07;57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.04e-28,19;UBERON:0006925,1.04e-28,19;UBERON:0008836,1.04e-28,19;UBERON:0008835,8.73e-25,22;UBERON:0003894,8.73e-25,22;UBERON:0009854,1.05e-23,23;UBERON:0007499,8.45e-22,25;UBERON:0009497,8.45e-22,25;UBERON:0000015,8.45e-22,25;UBERON:0002423,8.45e-22,25;UBERON:0006235,8.45e-22,25;UBERON:0004161,8.45e-22,25;UBERON:0009856,5.89e-21,26;UBERON:0002365,1.48e-17,31;UBERON:0002330,1.48e-17,31;UBERON:0005172,1.65e-17,54;UBERON:0005173,1.65e-17,54;UBERON:0003929,2.06e-17,54;UBERON:0002417,1.06e-15,60;UBERON:0000916,1.06e-15,60;UBERON:0002368,1.57e-15,35;UBERON:0002530,3.08e-12,59;UBERON:0000949,4.92e-12,45;UBERON:0005911,2.94e-11,82;UBERON:0005177,4.60e-09,101;UBERON:0009569,4.20e-08,112;UBERON:0004921,1.53e-07,118;UBERON:0003104,6.59e-07,160;UBERON:0009142,6.59e-07,160 | |||
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|short_description=p3@KNG1 | |short_description=p3@KNG1 | ||
}} | }} |
Latest revision as of 05:19, 17 September 2015
Short description: | p3@KNG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KNG1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000265023, uc003fqr.2, uc011bsa.1_5end |
EntrezGene: | KNG1 |
HGNC: | 6383 |
UniProt: | P01042 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.05e-20 | 12 |
endodermal cell | 3.24e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.04e-28 | 19 |
digestive gland | 1.04e-28 | 19 |
liver bud | 1.04e-28 | 19 |
hepatic diverticulum | 8.73e-25 | 22 |
liver primordium | 8.73e-25 | 22 |
digestive tract diverticulum | 1.05e-23 | 23 |
epithelial sac | 8.45e-22 | 25 |
epithelium of foregut-midgut junction | 8.45e-22 | 25 |
anatomical boundary | 8.45e-22 | 25 |
hepatobiliary system | 8.45e-22 | 25 |
foregut-midgut junction | 8.45e-22 | 25 |
septum transversum | 8.45e-22 | 25 |
sac | 5.89e-21 | 26 |
exocrine gland | 1.48e-17 | 31 |
exocrine system | 1.48e-17 | 31 |
abdomen element | 1.65e-17 | 54 |
abdominal segment element | 1.65e-17 | 54 |
gut epithelium | 2.06e-17 | 54 |
abdominal segment of trunk | 1.06e-15 | 60 |
abdomen | 1.06e-15 | 60 |
endocrine gland | 1.57e-15 | 35 |
gland | 3.08e-12 | 59 |
endocrine system | 4.92e-12 | 45 |
endo-epithelium | 2.94e-11 | 82 |
trunk region element | 4.60e-09 | 101 |
subdivision of trunk | 4.20e-08 | 112 |
subdivision of digestive tract | 1.53e-07 | 118 |
mesenchyme | 6.59e-07 | 160 |
entire embryonic mesenchyme | 6.59e-07 | 160 |