FFCP PHASE1:Hg19::chr5:176514428..176514437,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2264 | |EntrezGene=2264 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3691 | |HGNC=3691 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9V0 | |UniProt=D6R9V0 | ||
|association_with_transcript=8bp_to_ENST00000513166_5end | |association_with_transcript=8bp_to_ENST00000513166_5end | ||
|cluster_id=chr5:176514428..176514437,+ | |||
|coexpression_cluster_id=C786 | |coexpression_cluster_id=C786 | ||
|description=CAGE_peak_7_at_FGFR4_5end | |description=CAGE_peak_7_at_FGFR4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!3.57e-18!12;CL:0000417!3.57e-18!12;CL:0000668!3.57e-18!12;CL:0000414!3.57e-18!12;CL:0000412!3.57e-18!12;CL:0000182!3.57e-18!12;CL:0000313!2.11e-14!1;CL:0002563!2.95e-14!4;CL:0000223!1.53e-10!59;CL:0002253!5.37e-08!2;CL:0000159!7.52e-08!2 | |ontology_enrichment_celltype=CL:0000181!3.57e-18!12;CL:0000417!3.57e-18!12;CL:0000668!3.57e-18!12;CL:0000414!3.57e-18!12;CL:0000412!3.57e-18!12;CL:0000182!3.57e-18!12;CL:0000313!2.11e-14!1;CL:0002563!2.95e-14!4;CL:0000223!1.53e-10!59;CL:0002253!5.37e-08!2;CL:0000159!7.52e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.18e-37;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.18e-37;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.26e-37,12;CL:0000223,1.46e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.65e-72;11!UBERON:0009497;4.89e-61;13!UBERON:0001041;4.24e-27;30!UBERON:0003104;5.77e-26;31 | |ontology_enrichment_development_v019=UBERON:0004161;6.65e-72;11!UBERON:0009497;4.89e-61;13!UBERON:0001041;4.24e-27;30!UBERON:0003104;5.77e-26;31 | ||
|ontology_enrichment_disease=DOID:2152!2.11e-14!1;DOID:7!1.47e-08!39;DOID:3493!4.69e-08!2;DOID:305!2.79e-07!106 | |ontology_enrichment_disease=DOID:2152!2.11e-14!1;DOID:7!1.47e-08!39;DOID:3493!4.69e-08!2;DOID:305!2.79e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:7;8.23e-13;39 | |ontology_enrichment_disease_v019=DOID:7;8.23e-13;39 | ||
|ontology_enrichment_disease_v019_2=DOID:7,2.67e-12,39 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.06e-17!19;UBERON:0006925!1.06e-17!19;UBERON:0008836!1.06e-17!19;UBERON:0002365!2.59e-15!31;UBERON:0002330!2.59e-15!31;UBERON:0008835!2.72e-15!22;UBERON:0003894!2.72e-15!22;UBERON:0003929!4.27e-15!54;UBERON:0009854!1.26e-14!23;UBERON:0004911!2.11e-14!1;UBERON:0001242!2.95e-14!4;UBERON:0001262!2.95e-14!4;UBERON:0004786!2.95e-14!4;UBERON:0004808!2.95e-14!4;UBERON:0001277!2.95e-14!4;UBERON:0007499!1.86e-13!25;UBERON:0009497!1.86e-13!25;UBERON:0000015!1.86e-13!25;UBERON:0002423!1.86e-13!25;UBERON:0006235!1.86e-13!25;UBERON:0004161!1.86e-13!25;UBERON:0005057!6.13e-13!26;UBERON:0009856!6.13e-13!26;UBERON:0003350!1.35e-11!5;UBERON:0002530!1.38e-10!59;UBERON:0005911!1.12e-09!82;UBERON:0002368!1.34e-09!35;UBERON:0004909!7.52e-08!2;UBERON:0000949!1.90e-07!45;UBERON:0000485!7.87e-07!9 | |ontology_enrichment_uberon=UBERON:0002107!1.06e-17!19;UBERON:0006925!1.06e-17!19;UBERON:0008836!1.06e-17!19;UBERON:0002365!2.59e-15!31;UBERON:0002330!2.59e-15!31;UBERON:0008835!2.72e-15!22;UBERON:0003894!2.72e-15!22;UBERON:0003929!4.27e-15!54;UBERON:0009854!1.26e-14!23;UBERON:0004911!2.11e-14!1;UBERON:0001242!2.95e-14!4;UBERON:0001262!2.95e-14!4;UBERON:0004786!2.95e-14!4;UBERON:0004808!2.95e-14!4;UBERON:0001277!2.95e-14!4;UBERON:0007499!1.86e-13!25;UBERON:0009497!1.86e-13!25;UBERON:0000015!1.86e-13!25;UBERON:0002423!1.86e-13!25;UBERON:0006235!1.86e-13!25;UBERON:0004161!1.86e-13!25;UBERON:0005057!6.13e-13!26;UBERON:0009856!6.13e-13!26;UBERON:0003350!1.35e-11!5;UBERON:0002530!1.38e-10!59;UBERON:0005911!1.12e-09!82;UBERON:0002368!1.34e-09!35;UBERON:0004909!7.52e-08!2;UBERON:0000949!1.90e-07!45;UBERON:0000485!7.87e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.83e-42;19!UBERON:0006925;3.83e-42;19!UBERON:0002423;2.66e-32;25!UBERON:0002368;1.07e-23;33!UBERON:0002365;1.10e-23;31!UBERON:0002330;1.10e-23;31!UBERON:0000949;1.41e-15;43!UBERON:0002417;4.72e-10;58!UBERON:0000916;4.72e-10;58!UBERON:0005172;1.99e-09;52!UBERON:0005173;1.99e-09;52!UBERON:0002530;1.99e-09;57 | |ontology_enrichment_uberon_v019=UBERON:0002107;3.83e-42;19!UBERON:0006925;3.83e-42;19!UBERON:0002423;2.66e-32;25!UBERON:0002368;1.07e-23;33!UBERON:0002365;1.10e-23;31!UBERON:0002330;1.10e-23;31!UBERON:0000949;1.41e-15;43!UBERON:0002417;4.72e-10;58!UBERON:0000916;4.72e-10;58!UBERON:0005172;1.99e-09;52!UBERON:0005173;1.99e-09;52!UBERON:0002530;1.99e-09;57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.83e-42,19;UBERON:0006925,3.83e-42,19;UBERON:0008836,3.83e-42,19;UBERON:0008835,1.49e-36,22;UBERON:0003894,1.49e-36,22;UBERON:0009854,5.16e-35,23;UBERON:0007499,2.66e-32,25;UBERON:0009497,2.66e-32,25;UBERON:0000015,2.66e-32,25;UBERON:0002423,2.66e-32,25;UBERON:0006235,2.66e-32,25;UBERON:0004161,2.66e-32,25;UBERON:0009856,4.21e-31,26;UBERON:0002365,2.93e-26,31;UBERON:0002330,2.93e-26,31;UBERON:0002368,2.23e-23,35;UBERON:0000949,2.09e-18,45;UBERON:0003929,1.70e-15,54;UBERON:0005172,1.70e-15,54;UBERON:0005173,1.70e-15,54;UBERON:0002530,2.92e-14,59;UBERON:0002417,4.87e-14,60;UBERON:0000916,4.87e-14,60;UBERON:0005911,1.66e-10,82;UBERON:0001041,5.98e-10,87;UBERON:0005177,1.11e-08,101;UBERON:0009569,6.64e-08,112;UBERON:0003914,1.34e-07,117;UBERON:0004921,1.75e-07,118;UBERON:0005256,2.56e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349839999984783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26053091691558,2.22522817629149,1.55028150864625,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.853425474875886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349839999984783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26053091691558,2.22522817629149,1.55028150864625,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.853425474875886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@FGFR4 | |short_description=p7@FGFR4 | ||
}} | }} |
Latest revision as of 05:36, 17 September 2015
Short description: | p7@FGFR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FGFR4_5end |
Coexpression cluster: | C786_liver_hepatocellular_placenta_hepatoblastoma_normal_Intestinal_Wilms |
Association with transcript: | 8bp_to_ENST00000513166_5end |
EntrezGene: | FGFR4 |
HGNC: | 3691 |
UniProt: | D6R9V0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.26e-37 | 12 |
endodermal cell | 1.46e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.83e-42 | 19 |
digestive gland | 3.83e-42 | 19 |
liver bud | 3.83e-42 | 19 |
hepatic diverticulum | 1.49e-36 | 22 |
liver primordium | 1.49e-36 | 22 |
digestive tract diverticulum | 5.16e-35 | 23 |
epithelial sac | 2.66e-32 | 25 |
epithelium of foregut-midgut junction | 2.66e-32 | 25 |
anatomical boundary | 2.66e-32 | 25 |
hepatobiliary system | 2.66e-32 | 25 |
foregut-midgut junction | 2.66e-32 | 25 |
septum transversum | 2.66e-32 | 25 |
sac | 4.21e-31 | 26 |
exocrine gland | 2.93e-26 | 31 |
exocrine system | 2.93e-26 | 31 |
endocrine gland | 2.23e-23 | 35 |
endocrine system | 2.09e-18 | 45 |
gut epithelium | 1.70e-15 | 54 |
abdomen element | 1.70e-15 | 54 |
abdominal segment element | 1.70e-15 | 54 |
gland | 2.92e-14 | 59 |
abdominal segment of trunk | 4.87e-14 | 60 |
abdomen | 4.87e-14 | 60 |
endo-epithelium | 1.66e-10 | 82 |
foregut | 5.98e-10 | 87 |
trunk region element | 1.11e-08 | 101 |
subdivision of trunk | 6.64e-08 | 112 |
epithelial tube | 1.34e-07 | 117 |
subdivision of digestive tract | 1.75e-07 | 118 |
trunk mesenchyme | 2.56e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.67e-12 | 39 |