FFCP PHASE1:Hg19::chr10:13749881..13749896,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55691 | |EntrezGene=55691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25491 | |HGNC=25491 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-124bp_to_ENST00000492155_5end | |association_with_transcript=-124bp_to_ENST00000492155_5end | ||
|cluster_id=chr10:13749881..13749896,- | |||
|description=CAGE_peak_16_at_FRMD4A_5end | |description=CAGE_peak_16_at_FRMD4A_5end | ||
|id=chr10:13749881..13749896,- | |id=chr10:13749881..13749896,- | ||
|ontology_enrichment_celltype=CL:0000183!1.11e-10!59;CL:0000187!3.45e-10!54;CL:0000680!3.05e-09!57;CL:0000056!3.05e-09!57;CL:0000355!3.05e-09!57;CL:0000393!3.79e-09!60;CL:0000211!3.79e-09!60;CL:0000055!3.59e-08!180;CL:0000188!3.17e-07!9;CL:0000243!3.20e-07!15;CL:0000125!3.20e-07!15;CL:0000030!3.20e-07!15;CL:0000339!3.20e-07!15;CL:0000192!7.00e-07!42;CL:0000514!7.00e-07!42 | |ontology_enrichment_celltype=CL:0000183!1.11e-10!59;CL:0000187!3.45e-10!54;CL:0000680!3.05e-09!57;CL:0000056!3.05e-09!57;CL:0000355!3.05e-09!57;CL:0000393!3.79e-09!60;CL:0000211!3.79e-09!60;CL:0000055!3.59e-08!180;CL:0000188!3.17e-07!9;CL:0000243!3.20e-07!15;CL:0000125!3.20e-07!15;CL:0000030!3.20e-07!15;CL:0000339!3.20e-07!15;CL:0000192!7.00e-07!42;CL:0000514!7.00e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.84e-34;2!CL:0002591;9.48e-18;1!CL:0002539;1.57e-15;10!CL:0002600;1.51e-09;2!CL:0000359;3.91e-09;32!CL:0000192;3.51e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.44e-17,1;CL:0002539,1.29e-15,10;CL:0000192,1.20e-09,43;CL:0000514,1.20e-09,43;CL:0002600,1.71e-09,2;CL:0000047,2.16e-09,8;CL:0000359,1.36e-08,32;CL:0000187,1.53e-07,55;CL:0000680,3.77e-07,58;CL:0000056,3.77e-07,58;CL:0000355,3.77e-07,58;CL:0000393,8.51e-07,61;CL:0000211,8.51e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.42e-15;10!UBERON:0007687;1.42e-15;10!UBERON:0003104;3.75e-09;31!CL:0000514;3.51e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!5.94e-11!70;UBERON:0002385!5.34e-10!63;UBERON:0001015!5.34e-10!63;UBERON:0000383!5.34e-10!63;UBERON:0000914!5.70e-10!83;UBERON:0002329!5.70e-10!83;UBERON:0003077!5.70e-10!83;UBERON:0003059!5.70e-10!83;UBERON:0007282!5.70e-10!83;UBERON:0009618!5.70e-10!83;UBERON:0007285!5.70e-10!83;UBERON:0001134!7.43e-10!61;UBERON:0002036!7.43e-10!61;UBERON:0003082!7.43e-10!61;UBERON:0000481!7.47e-10!347;UBERON:0000119!1.25e-08!312;UBERON:0000483!1.47e-08!309;UBERON:0000475!2.00e-08!365;UBERON:0000486!5.28e-08!82;UBERON:0001135!1.02e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.57e-15;10!UBERON:0004695;1.57e-15;10!UBERON:0002111;1.57e-15;10!UBERON:0004178;1.57e-15;10!UBERON:0001135;1.45e-10;15!UBERON:0000078;1.51e-09;2!UBERON:0002012;1.51e-09;2!UBERON:0008886;1.51e-09;2!UBERON:0002385;8.94e-09;31!UBERON:0001015;8.94e-09;31!UBERON:0000383;8.94e-09;31!UBERON:0000947;1.04e-07;21!UBERON:0010191;1.04e-07;21!UBERON:0002113;7.93e-07;24!UBERON:0011143;7.93e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,1.29e-15,10;UBERON:0004695,1.29e-15,10;UBERON:0002111,1.29e-15,10;UBERON:0004178,1.29e-15,10;UBERON:0001135,1.27e-10,15;UBERON:0000078,1.86e-09,2;UBERON:0007497,1.86e-09,2;UBERON:0003643,1.86e-09,2;UBERON:0003504,1.86e-09,2;UBERON:0003469,1.86e-09,2;UBERON:0003496,1.86e-09,2;UBERON:0002012,1.86e-09,2;UBERON:0008886,1.86e-09,2;UBERON:0007303,1.86e-09,2;UBERON:0002061,1.86e-09,2;UBERON:0005432,1.86e-09,2;UBERON:0004363,1.86e-09,2;UBERON:0001134,2.20e-09,62;UBERON:0002036,2.20e-09,62;UBERON:0003082,2.20e-09,62;UBERON:0002385,4.38e-09,64;UBERON:0001015,4.38e-09,64;UBERON:0000383,4.38e-09,64;UBERON:0002329,3.64e-08,71;UBERON:0003059,3.64e-08,71;UBERON:0007282,3.64e-08,71;UBERON:0004290,3.64e-08,71;UBERON:0009618,3.64e-08,71;UBERON:0003077,4.76e-08,72;UBERON:0007285,4.76e-08,72;UBERON:0007524,6.19e-08,73;UBERON:0000947,9.51e-08,21;UBERON:0010191,9.51e-08,21;UBERON:0003104,1.23e-07,160;UBERON:0009142,1.23e-07,160;UBERON:0007503,2.08e-07,78;UBERON:0000486,6.02e-07,83 | |||
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| ||
|short_description=p16@FRMD4A | |short_description=p16@FRMD4A | ||
}} | }} |
Latest revision as of 06:37, 17 September 2015
Short description: | p16@FRMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_FRMD4A_5end |
Coexpression cluster: | NA |
Association with transcript: | -124bp_to_ENST00000492155_5end |
EntrezGene: | FRMD4A |
HGNC: | 25491 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.44e-17 | 1 |
aortic smooth muscle cell | 1.29e-15 | 10 |
smooth muscle cell | 1.20e-09 | 43 |
smooth muscle myoblast | 1.20e-09 | 43 |
smooth muscle cell of trachea | 1.71e-09 | 2 |
neuronal stem cell | 2.16e-09 | 8 |
vascular associated smooth muscle cell | 1.36e-08 | 32 |
muscle cell | 1.53e-07 | 55 |
muscle precursor cell | 3.77e-07 | 58 |
myoblast | 3.77e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.77e-07 | 58 |
electrically responsive cell | 8.51e-07 | 61 |
electrically active cell | 8.51e-07 | 61 |