FFCP PHASE1:Hg19::chr20:57594433..57594447,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81027 | |EntrezGene=81027 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16257 | |HGNC=16257 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H4B7 | |UniProt=Q9H4B7 | ||
|association_with_transcript=124bp_to_ENST00000217133,NM_030773,uc002yak.2_5end | |association_with_transcript=124bp_to_ENST00000217133,NM_030773,uc002yak.2_5end | ||
|cluster_id=chr20:57594433..57594447,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_2_at_TUBB1_5end | |description=CAGE_peak_2_at_TUBB1_5end | ||
|id=chr20:57594433..57594447,+ | |id=chr20:57594433..57594447,+ | ||
|ontology_enrichment_celltype=CL:0000094!2.39e-18!8;CL:0000037!1.08e-16!172;CL:0000566!1.08e-16!172;CL:0000988!4.56e-15!182;CL:0002032!8.55e-15!165;CL:0000837!8.55e-15!165;CL:0000763!9.90e-15!112;CL:0000049!9.90e-15!112;CL:0000081!7.36e-13!11;CL:0000738!1.79e-12!140;CL:0000766!1.05e-11!76;CL:0002057!1.37e-08!42;CL:0002087!2.04e-08!119;CL:0000842!4.81e-08!3;CL:0000775!6.32e-08!3;CL:0000767!7.57e-08!3;CL:0000860!9.09e-08!45;CL:0002031!5.30e-07!124 | |ontology_enrichment_celltype=CL:0000094!2.39e-18!8;CL:0000037!1.08e-16!172;CL:0000566!1.08e-16!172;CL:0000988!4.56e-15!182;CL:0002032!8.55e-15!165;CL:0000837!8.55e-15!165;CL:0000763!9.90e-15!112;CL:0000049!9.90e-15!112;CL:0000081!7.36e-13!11;CL:0000738!1.79e-12!140;CL:0000766!1.05e-11!76;CL:0002057!1.37e-08!42;CL:0002087!2.04e-08!119;CL:0000842!4.81e-08!3;CL:0000775!6.32e-08!3;CL:0000767!7.57e-08!3;CL:0000860!9.09e-08!45;CL:0002031!5.30e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.30e-40;8!CL:0000081;4.85e-29;11!CL:0000226;1.56e-16;3!CL:0000842;1.56e-16;3!CL:0000775;3.69e-16;3!CL:0000767;4.32e-16;3!CL:0000771;1.18e-11;2!CL:0000764;3.12e-11;2!CL:0000558;3.12e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.82e-40,8;CL:0000081,4.10e-29,11;CL:0000226,1.52e-16,3;CL:0000842,1.52e-16,3;CL:0000775,2.85e-16,3;CL:0000767,4.32e-16,3;CL:0000771,1.21e-11,2;CL:0000764,3.84e-11,2;CL:0000765,3.84e-11,2;CL:0000050,3.84e-11,2;CL:0000038,3.84e-11,2;CL:0000558,3.84e-11,2;CL:0000547,3.84e-11,2;CL:0000549,3.84e-11,2;CL:0000550,3.84e-11,2;CL:0000552,3.84e-11,2;CL:0000037,1.12e-08,168;CL:0000763,1.79e-08,108;CL:0000049,1.79e-08,108;CL:0000988,5.13e-08,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!2.78e-09!8 | |ontology_enrichment_disease=DOID:1036!2.78e-09!8 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!9.18e-22!15;UBERON:0000179!9.18e-22!15;UBERON:0000463!9.18e-22!15;UBERON:0002390!4.06e-14!102;UBERON:0003061!4.06e-14!102;UBERON:0002193!4.47e-12!112;UBERON:0007023!9.03e-12!115 | |ontology_enrichment_uberon=UBERON:0000178!9.18e-22!15;UBERON:0000179!9.18e-22!15;UBERON:0000463!9.18e-22!15;UBERON:0002390!4.06e-14!102;UBERON:0003061!4.06e-14!102;UBERON:0002193!4.47e-12!112;UBERON:0007023!9.03e-12!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.81e-50;15!UBERON:0000179;4.81e-50;15!UBERON:0000463;4.81e-50;15!UBERON:0002390;1.13e-28;32!UBERON:0002193;2.02e-15;42!UBERON:0002106;9.08e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.71e-50,15;UBERON:0000179,4.71e-50,15;UBERON:0000463,4.71e-50,15;UBERON:0002390,3.04e-10,98;UBERON:0003061,3.04e-10,98;UBERON:0002193,5.43e-09,108;UBERON:0002106,8.19e-08,3;UBERON:0004854,8.19e-08,3;UBERON:0009034,8.19e-08,3;UBERON:0002095,8.19e-08,3;UBERON:0004782,8.19e-08,3;UBERON:0003281,8.19e-08,3;UBERON:0009664,8.19e-08,3;UBERON:0002296,8.19e-08,3;UBERON:0005602,8.19e-08,3;UBERON:0001179,8.19e-08,3;UBERON:0006293,8.19e-08,3 | |||
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| ||
|short_description=p2@TUBB1 | |short_description=p2@TUBB1 | ||
}} | }} |
Latest revision as of 07:18, 17 September 2015
Short description: | p2@TUBB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TUBB1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 124bp_to_ENST00000217133, NM_030773, uc002yak.2_5end |
EntrezGene: | TUBB1 |
HGNC: | 16257 |
UniProt: | Q9H4B7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.82e-40 | 8 |
blood cell | 4.10e-29 | 11 |
single nucleate cell | 1.52e-16 | 3 |
mononuclear cell | 1.52e-16 | 3 |
neutrophil | 2.85e-16 | 3 |
basophil | 4.32e-16 | 3 |
eosinophil | 1.21e-11 | 2 |
erythroid lineage cell | 3.84e-11 | 2 |
erythroblast | 3.84e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 3.84e-11 | 2 |
erythroid progenitor cell | 3.84e-11 | 2 |
reticulocyte | 3.84e-11 | 2 |
proerythroblast | 3.84e-11 | 2 |
basophilic erythroblast | 3.84e-11 | 2 |
polychromatophilic erythroblast | 3.84e-11 | 2 |
orthochromatic erythroblast | 3.84e-11 | 2 |
hematopoietic stem cell | 1.12e-08 | 168 |
myeloid cell | 1.79e-08 | 108 |
common myeloid progenitor | 1.79e-08 | 108 |
hematopoietic cell | 5.13e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 4.71e-50 | 15 |
haemolymphatic fluid | 4.71e-50 | 15 |
organism substance | 4.71e-50 | 15 |
hematopoietic system | 3.04e-10 | 98 |
blood island | 3.04e-10 | 98 |
hemolymphoid system | 5.43e-09 | 108 |
spleen | 8.19e-08 | 3 |
gastrointestinal system mesentery | 8.19e-08 | 3 |
stomach region | 8.19e-08 | 3 |
mesentery | 8.19e-08 | 3 |
gastrointestinal system serosa | 8.19e-08 | 3 |
mesentery of stomach | 8.19e-08 | 3 |
gut mesentery | 8.19e-08 | 3 |
dorsal mesentery | 8.19e-08 | 3 |
dorsal mesogastrium | 8.19e-08 | 3 |
peritoneal cavity | 8.19e-08 | 3 |
spleen primordium | 8.19e-08 | 3 |