FFCP PHASE1:Hg19::chr19:34855925..34855940,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:34855925..34855940,+ to FFCP PHASE1:Hg19::chr19:34855925..34855940,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2821 | |EntrezGene=2821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4458 | |HGNC=4458 | ||
|TSSclassifier=strong | |||
|UniProt=P06744 | |UniProt=P06744 | ||
|association_with_transcript=-91bp_to_ENST00000356487,NM_000175_5end | |||
|cluster_id=chr19:34855925..34855940,+ | |||
|description=CAGE_peak_5_at_GPI_5end | |||
|id=chr19:34855925..34855940,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.27e-10!254;CL:1000449!6.92e-08!16;CL:1000497!2.06e-07!18;CL:0002518!2.06e-07!18;CL:1000507!4.06e-07!12;CL:1000494!4.06e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000449;9.27e-10;15!CL:1000507;7.16e-09;10!CL:1000494;7.16e-09;10!CL:1000497;1.31e-08;17!CL:0002518;1.31e-08;17!CL:0002681;1.56e-07;12!CL:0002584;1.56e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.86e-09,15;CL:1000507,1.08e-08,10;CL:1000494,1.08e-08,10;CL:1000497,2.85e-08,17;CL:0002518,2.85e-08,17;CL:0000066,1.92e-07,253;CL:0002681,2.82e-07,12;CL:0002584,2.82e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!8.42e-24!194;UBERON:0004111!9.97e-21!241;UBERON:0000477!1.09e-17!286;UBERON:0000483!1.33e-17!309;UBERON:0000119!2.20e-17!312;UBERON:0003914!2.52e-13!118;UBERON:0000475!3.35e-12!365;UBERON:0009569!4.29e-11!113;UBERON:0003103!1.07e-10!69;UBERON:0000481!4.65e-10!347;UBERON:0000489!2.63e-09!32;UBERON:0002417!9.10e-09!61;UBERON:0000916!9.10e-09!61;UBERON:0001049!1.46e-08!57;UBERON:0005068!1.46e-08!57;UBERON:0006241!1.46e-08!57;UBERON:0007135!1.46e-08!57;UBERON:0000064!1.49e-08!219;UBERON:0002100!3.84e-08!216;UBERON:0003075!3.89e-08!86;UBERON:0007284!3.89e-08!86;UBERON:0005172!4.48e-08!55;UBERON:0005173!4.48e-08!55;UBERON:0002113!5.25e-08!27;UBERON:0003918!5.25e-08!27;UBERON:0005095!5.25e-08!27;UBERON:0007687!5.25e-08!27;UBERON:0004211!6.92e-08!16;UBERON:0001285!6.92e-08!16;UBERON:0007684!6.92e-08!16;UBERON:0003220!6.92e-08!16;UBERON:0004208!6.92e-08!16;UBERON:0000055!7.84e-08!69;UBERON:0006555!8.45e-08!17;UBERON:0005103!8.45e-08!17;UBERON:0000083!8.45e-08!17;UBERON:0009201!8.45e-08!17;UBERON:0004819!8.45e-08!17;UBERON:0006553!8.45e-08!17;UBERON:0003074!8.45e-08!17;UBERON:0003060!8.45e-08!17;UBERON:0000080!1.15e-07!18;UBERON:0002120!1.15e-07!18;UBERON:0004875!1.15e-07!18;UBERON:0005721!1.15e-07!18;UBERON:0005754!1.15e-07!18;UBERON:0007297!1.15e-07!18;UBERON:0000955!1.42e-07!69;UBERON:0006238!1.42e-07!69;UBERON:0001008!2.18e-07!45;UBERON:0005177!2.20e-07!107;UBERON:0005743!2.93e-07!86;UBERON:0006554!3.50e-07!44;UBERON:0002780!3.52e-07!41;UBERON:0001890!3.52e-07!41;UBERON:0006240!3.52e-07!41;UBERON:0009773!4.06e-07!12;UBERON:0001231!4.06e-07!12;UBERON:0004810!4.06e-07!12;UBERON:0001981!5.91e-07!60;UBERON:0007500!5.91e-07!60;UBERON:0004537!5.91e-07!60;UBERON:0006965!5.91e-07!60;UBERON:0000073!6.09e-07!94;UBERON:0001016!6.09e-07!94;UBERON:0001017!6.09e-07!82;UBERON:0000353!7.18e-07!17;UBERON:0002049!9.73e-07!79;UBERON:0007798!9.73e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;9.67e-11;29!UBERON:0006555;9.27e-10;15!UBERON:0004819;9.27e-10;15!UBERON:0001285;9.27e-10;15!UBERON:0007684;9.27e-10;15!UBERON:0002113;1.26e-09;24!UBERON:0011143;1.26e-09;24!UBERON:0006554;2.45e-09;30!UBERON:0001008;2.45e-09;30!UBERON:0004211;7.16e-09;10!UBERON:0009773;7.16e-09;10!UBERON:0001231;7.16e-09;10!UBERON:0004810;7.16e-09;10!UBERON:0000353;1.45e-07;15!UBERON:0001225;1.56e-07;12!UBERON:0008987;1.56e-07;12!UBERON:0003103;5.44e-07;61 | |||
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| ||
|short_description=p5@GPI | |||
}} | }} |
Latest revision as of 08:03, 17 September 2015
Short description: | p5@GPI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GPI_5end |
Coexpression cluster: | NA |
Association with transcript: | -91bp_to_ENST00000356487, NM_000175_5end |
EntrezGene: | GPI |
HGNC: | 4458 |
UniProt: | P06744 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.86e-09 | 15 |
kidney tubule cell | 1.08e-08 | 10 |
nephron tubule epithelial cell | 1.08e-08 | 10 |
kidney cell | 2.85e-08 | 17 |
kidney epithelial cell | 2.85e-08 | 17 |
epithelial cell | 1.92e-07 | 253 |
kidney cortical cell | 2.82e-07 | 12 |
renal cortical epithelial cell | 2.82e-07 | 12 |