FFCP PHASE1:Hg19::chr20:58411232..58411249,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116154 | |EntrezGene=116154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15833 | |HGNC=15833 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=165bp_to_uc002yay.2_5end | |association_with_transcript=165bp_to_uc002yay.2_5end | ||
|cluster_id=chr20:58411232..58411249,+ | |||
|coexpression_cluster_id=C4057 | |coexpression_cluster_id=C4057 | ||
|description=CAGE_peak_15_at_PHACTR3_5end | |description=CAGE_peak_15_at_PHACTR3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002327;1.50e-09;4 | |ontology_enrichment_celltype_v019=CL:0002327;1.50e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.44e-09,4 | |||
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|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p15@PHACTR3 | |short_description=p15@PHACTR3 | ||
}} | }} |
Latest revision as of 08:07, 17 September 2015
Short description: | p15@PHACTR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PHACTR3_5end |
Coexpression cluster: | C4057_prostate_smallcell_Mammary_mucinous_pituitary_Keratinocyte_bile |
Association with transcript: | 165bp_to_uc002yay.2_5end |
EntrezGene: | PHACTR3 |
HGNC: | 15833 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.53e-66 | 2 |
cranial nerve II | 7.06e-34 | 1 |
cranial nerve | 7.06e-34 | 1 |
nerve trunk | 7.06e-34 | 1 |
nerve connecting eye with brain | 7.06e-34 | 1 |
nerve | 7.06e-34 | 1 |
retinal neural layer | 7.06e-34 | 1 |
presumptive neural retina | 7.06e-34 | 1 |
gland of diencephalon | 1.17e-33 | 4 |
neuroendocrine gland | 1.17e-33 | 4 |
diencephalon | 9.49e-20 | 7 |
future diencephalon | 9.49e-20 | 7 |
neural tissue | 1.07e-17 | 2 |
multi cell component structure | 1.07e-17 | 2 |
neuron projection bundle | 1.07e-17 | 2 |
mammary gland | 1.44e-09 | 4 |
mammary bud | 1.44e-09 | 4 |
mammary ridge | 1.44e-09 | 4 |
mammary placode | 1.44e-09 | 4 |
layer of retina | 1.57e-09 | 4 |
gland | 1.63e-09 | 59 |
retina | 8.97e-07 | 6 |
photoreceptor array | 8.97e-07 | 6 |
posterior segment of eyeball | 8.97e-07 | 6 |