FFCP PHASE1:Hg19::chr3:189027642..189027661,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285386 | |EntrezGene=285386 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24759 | |HGNC=24759 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENST00000481307_5end | |association_with_transcript=-21bp_to_ENST00000481307_5end | ||
|cluster_id=chr3:189027642..189027661,+ | |||
|description=CAGE_peak_9_at_TPRG1_5end | |description=CAGE_peak_9_at_TPRG1_5end | ||
|id=chr3:189027642..189027661,+ | |id=chr3:189027642..189027661,+ | ||
|ontology_enrichment_celltype=CL:0002251;2.92e-12;20 | |ontology_enrichment_celltype=CL:0002076!1.68e-26!43;CL:0000223!3.44e-24!59;CL:0002251!7.20e-19!21;CL:0000066!9.06e-09!254 | ||
| | |ontology_enrichment_celltype_v019=CL:0002251;2.92e-12;20 | ||
|ontology_enrichment_disease=DOID:1749;2.72e-25;14!DOID:0060060;1.52e-11;1!DOID:3151;1.52e-11;1!DOID:0060061;1.52e-11;1!DOID:3149;1.52e-11;1!DOID:8691;1.52e-11;1 | |ontology_enrichment_celltype_v019_2=CL:0002251,2.92e-12,20;CL:0002076,4.62e-08,42;CL:0000223,1.08e-07,58 | ||
|ontology_enrichment_uberon=UBERON:0001000;4.01e-11;1!UBERON:0005352;4.01e-11;1!UBERON:0003343;7.16e-11;4!UBERON:0004785;7.16e-11;4!UBERON:0002331;7.09e-10;10!UBERON:0000161;1.43e-08;19!UBERON:0000166;1.43e-08;19!UBERON:0000974;1.55e-07;6!UBERON:0003729;2.17e-07;13!UBERON:0000178;9.71e-07;15!UBERON:0000179;9.71e-07;15!UBERON:0000463;9.71e-07;15 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!9.10e-14!14;DOID:4074!1.06e-07!2;DOID:4905!1.06e-07!2;DOID:3498!1.06e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.72e-25;14!DOID:0060060;1.52e-11;1!DOID:3151;1.52e-11;1!DOID:0060061;1.52e-11;1!DOID:3149;1.52e-11;1!DOID:8691;1.52e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.29e-25,14;DOID:0060060,1.45e-11,1;DOID:0060061,1.45e-11,1;DOID:8691,1.45e-11,1;DOID:3151,1.60e-11,1;DOID:3149,1.60e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000161!5.36e-12!35;UBERON:0000344!2.67e-11!12;UBERON:0000974!1.95e-10!10;UBERON:0000166!2.09e-10!21;UBERON:0003729!2.67e-10!5;UBERON:0004119!4.22e-10!169;UBERON:0000925!4.22e-10!169;UBERON:0006595!4.22e-10!169;UBERON:0001004!3.81e-09!72;UBERON:0000165!4.23e-09!28;UBERON:0000930!4.23e-09!28;UBERON:0001007!3.61e-08!155;UBERON:0001555!3.61e-08!155;UBERON:0007026!3.61e-08!155;UBERON:0003343!8.58e-08!4;UBERON:0004785!8.58e-08!4;UBERON:0000341!6.90e-07!2;UBERON:0003127!8.78e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;4.01e-11;1!UBERON:0005352;4.01e-11;1!UBERON:0003343;7.16e-11;4!UBERON:0004785;7.16e-11;4!UBERON:0002331;7.09e-10;10!UBERON:0000161;1.43e-08;19!UBERON:0000166;1.43e-08;19!UBERON:0000974;1.55e-07;6!UBERON:0003729;2.17e-07;13!UBERON:0000178;9.71e-07;15!UBERON:0000179;9.71e-07;15!UBERON:0000463;9.71e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,2.68e-11,1;UBERON:0005352,2.68e-11,1;UBERON:0003343,7.35e-11,4;UBERON:0004785,7.35e-11,4;UBERON:0002331,7.09e-10,10;UBERON:0000358,7.09e-10,10;UBERON:0000307,7.09e-10,10;UBERON:0000091,7.09e-10,10;UBERON:0000087,7.09e-10,10;UBERON:0007010,7.09e-10,10;UBERON:0007806,7.09e-10,10;UBERON:0008780,7.09e-10,10;UBERON:0005728,7.09e-10,10;UBERON:0000166,2.04e-07,22;UBERON:0003729,2.19e-07,13;UBERON:0000161,9.29e-07,36;UBERON:0000178,9.71e-07,15;UBERON:0000179,9.71e-07,15;UBERON:0000463,9.71e-07,15 | |||
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| ||
|short_description=p9@TPRG1 | |short_description=p9@TPRG1 | ||
}} | }} |
Latest revision as of 08:59, 17 September 2015
Short description: | p9@TPRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TPRG1_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000481307_5end |
EntrezGene: | TPRG1 |
HGNC: | 24759 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 2.92e-12 | 20 |
endo-epithelial cell | 4.62e-08 | 42 |
endodermal cell | 1.08e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 2.68e-11 | 1 |
spermatic cord | 2.68e-11 | 1 |
mucosa of oral region | 7.35e-11 | 4 |
respiratory system mucosa | 7.35e-11 | 4 |
umbilical cord | 7.09e-10 | 10 |
blastocyst | 7.09e-10 | 10 |
blastula | 7.09e-10 | 10 |
bilaminar disc | 7.09e-10 | 10 |
inner cell mass | 7.09e-10 | 10 |
cleaving embryo | 7.09e-10 | 10 |
connecting stalk | 7.09e-10 | 10 |
inner cell mass derived epiblast | 7.09e-10 | 10 |
extraembryonic mesoderm | 7.09e-10 | 10 |
oral opening | 2.04e-07 | 22 |
mouth mucosa | 2.19e-07 | 13 |
orifice | 9.29e-07 | 36 |
blood | 9.71e-07 | 15 |
haemolymphatic fluid | 9.71e-07 | 15 |
organism substance | 9.71e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.29e-25 | 14 |
non-Hodgkin lymphoma | 1.45e-11 | 1 |
cutaneous T cell lymphoma | 1.45e-11 | 1 |
mycosis fungoides | 1.45e-11 | 1 |
skin squamous cell carcinoma | 1.60e-11 | 1 |
keratoacanthoma | 1.60e-11 | 1 |