FFCP PHASE1:Hg19::chr5:179222505..179222526,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:179222505..179222526,+ to FFCP PHASE1:Hg19::chr5:179222505..179222526,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4056 | |EntrezGene=4056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6719 | |HGNC=6719 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000509898_5end | |||
|cluster_id=chr5:179222505..179222526,+ | |||
|description=CAGE_peak_4_at_LTC4S_5end | |||
|id=chr5:179222505..179222526,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.80e-19!254;CL:0002076!5.98e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002537;2.19e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.04e-13,253;CL:0002537,2.76e-07,5;CL:0002076,4.35e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.12e-20!106;DOID:0050687!7.74e-14!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.84e-09;4!DOID:1612;4.84e-09;4!DOID:7;1.65e-08;39!DOID:1749;4.36e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.57e-18,106;DOID:0050687,3.09e-13,143;DOID:7,6.18e-11,39;DOID:5093,1.68e-09,4;DOID:1612,1.68e-09,4;DOID:1749,2.24e-08,14;DOID:162,3.74e-08,235;DOID:14566,9.54e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.63e-13!169;UBERON:0000925!5.63e-13!169;UBERON:0006595!5.63e-13!169;UBERON:0001007!1.11e-09!155;UBERON:0001555!1.11e-09!155;UBERON:0007026!1.11e-09!155;UBERON:0006554!6.57e-09!44;UBERON:0005177!1.74e-08!107;UBERON:0001008!1.83e-08!45;UBERON:0000062!6.83e-08!511;UBERON:0002113!1.11e-07!27;UBERON:0003918!1.11e-07!27;UBERON:0005095!1.11e-07!27;UBERON:0007687!1.11e-07!27;UBERON:0005911!1.51e-07!82;UBERON:0000064!2.00e-07!219;UBERON:0000489!2.41e-07!32;UBERON:0000077!4.38e-07!130;UBERON:0000481!4.78e-07!347;UBERON:0000464!5.84e-07!104;UBERON:0004921!6.02e-07!129;UBERON:0004185!6.02e-07!129;UBERON:0000466!6.11e-07!126;UBERON:0005153!6.26e-07!37;UBERON:0001004!6.51e-07!72;UBERON:0009569!6.80e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;1.30e-08;4!UBERON:0004785;1.30e-08;4!UBERON:0000305;1.40e-07;7!UBERON:0005631;4.45e-07;10!UBERON:0000158;4.45e-07;10!UBERON:0006947;8.54e-07;3!UBERON:0004054;8.54e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.08e-08,4;UBERON:0004785,1.08e-08,4;UBERON:0000305,1.91e-07,7;UBERON:0002113,5.86e-07,26;UBERON:0003918,5.86e-07,26;UBERON:0011143,5.86e-07,26;UBERON:0005095,5.86e-07,26;UBERON:0007687,5.86e-07,26;UBERON:0006947,6.58e-07,3;UBERON:0004054,6.58e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,4.88460817580699,0.436882744260345,1.31883489114227,0,0.331397375727916,0,0,0.730310090387373,0,0.369363174230364,0.204000691244253,0,0.286235987131057,0.410623275218653,0.376627918784408,0,0.0821005894499457,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.722878304769133,0,0.144846518960824,0,0,0.283604451492204,0,0.175669571386252,0.261958150995425,2.18577172975525,2.59549109949101,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0.302256294682921,0.169560592310488,0.57978255948989,0,0.286804595389004,0.609868530647977,1.19276791489337,1.51052125730374,1.45125477021519,1.7662459561294,1.09493207722749,0,0.643240938192885,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0.269662616320329,0.588664395376038,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,1.8448265781467,0.343135620597051,0,0,0.201057944823262,0.833296006426766,0,0,0,0.579652024875384,0.234817388471643,0,0,0,4.74122638775565,1.71697232418975,0,0,0,0.93733833986777,0.335964256397719,0.141775097242386,0.806026704325635,0.290633938513962,0.383382679165211,0,7.57216532513744,0.207328115540772,0.432359860250884,0.50496973370552,0,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0.587403472388222,0,0,0,0,0.909382714338778,0,1.20956117331872,0,0,0.280660094433074,0,0,0,1.48418066444991,0,0,0,0,0.116210378459959,0.966875596732978,0,1.01289087829486,0,0,0.131124414959424,0.451199612907412,0.385076685522074,0.784349769176855,1.46139224653261,0.844413031143006,0,0,0,0,0.812839312631559,1.00337954770971,1.01950509218015,1.66215201785745,1.34324852833307,0.219259876645935,0.261435451024901,0.512900250232778,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,1.32227932288782,0.768760269460425,1.27612712494584,2.023155617111,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0.255897791311334,0,0.318203247925937,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0.655894752046633,0,0,0,0,0.196498082026242,0,0,0,0.329294892959902,0,0,0.48111056362756,0,0,0.470719003883896,0.86101074534246,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,2.67060177818683,0,0.735120647943095,0.371606350251437,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,2.16364542780786,2.99764771198038,0,0.748562161632879,0.146508179271894,0,0,0.284136146806413,2.86493381685228,3.8605408508243,4.91457123358771,0,0.140669416410513,0,0,1.90012867315194,0.19924798825107,0,0.755798243562828,0,0,0,1.16828856491525,1.9692329214317,1.53471711068062,0.0986434056369336,0,0,0,0.185536196323703,0,7.29197731038653,1.92411999991631,0,0.455173793141999,1.01701460117107,4.01859059005492,0.344743373241465,0,2.08349993919951,0,0.120596438625408,0,0.331737779793674,0,0,0,4.46155981691531,0.307801034015188,0,0.46112780877612,0.718061155278177,6.19290019955446,1.5950057986596,0.457987967009312,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0.843992258112108,2.44849212238722,0.706765357169704,0,0,0.265372693510018,0.611030144933625,0,0,0,0.337005664903385,0,0,0,2.15231080825299,0,1.57833761139756,0,0,0.126373159256976,1.35291077473043,0.518440956986236,0,0,0,0,2.56148591426813,0,0,1.37189356380129,0.69647365264322,1.39781334593624,0,0.483781656445426,0.0730893170861856,0.246346371159628,0.290967049465258,0.0882561266915003,0,0,0,0,6.06209286477889,0.721429382263803,0.213452994739353,0,0.144090417154106,0.114536596165916,0.857974989309823,0,1.49103042678519,1.88555227693436,0,0,0,0.577901179803038,0,0.136905378891993,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,4.5926170114768,0,0,0.134366944973453,0,1.16495949527454,0.393915911536118,0,0.26961417541674,0,0,0,0.272406812223151,1.60753148465019,0.825236619583403,0.83088067605837,0.2249738915515,5.41661368190565,0.0607495566580247,1.0063040627978,0.788057072991982,0.472091293214983,0.105600336519406,0,1.91915197319445,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0,0.26446520348538,0,2.11444506695002,0.32036223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| ||
|short_description=p4@LTC4S | |||
}} | }} |
Latest revision as of 09:21, 17 September 2015
Short description: | p4@LTC4S |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LTC4S_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000509898_5end |
EntrezGene: | LTC4S |
HGNC: | 6719 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.04e-13 | 253 |
amnion mesenchymal stem cell | 2.76e-07 | 5 |
endo-epithelial cell | 4.35e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.08e-08 | 4 |
respiratory system mucosa | 1.08e-08 | 4 |
amnion | 1.91e-07 | 7 |
kidney | 5.86e-07 | 26 |
kidney mesenchyme | 5.86e-07 | 26 |
upper urinary tract | 5.86e-07 | 26 |
kidney rudiment | 5.86e-07 | 26 |
kidney field | 5.86e-07 | 26 |
male genital duct | 6.58e-07 | 3 |
internal male genitalia | 6.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.57e-18 | 106 |
cell type cancer | 3.09e-13 | 143 |
disease of anatomical entity | 6.18e-11 | 39 |
thoracic cancer | 1.68e-09 | 4 |
breast cancer | 1.68e-09 | 4 |
squamous cell carcinoma | 2.24e-08 | 14 |
cancer | 3.74e-08 | 235 |
disease of cellular proliferation | 9.54e-08 | 239 |