FFCP PHASE1:Hg19::chr10:18429301..18429338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=783 | |EntrezGene=783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1402 | |HGNC=1402 | ||
|TSSclassifier=strong | |||
|UniProt=Q08289,Q6TME3,A6PVM6 | |UniProt=Q08289,Q6TME3,A6PVM6 | ||
|association_with_transcript=-267bp_to_ENST00000324631,NM_201593,NM_201596,NM_201597,uc001ipr.2,uc001ips.2,uc001ipt.2,uc009xjz.1_5end | |association_with_transcript=-267bp_to_ENST00000324631,NM_201593,NM_201596,NM_201597,uc001ipr.2,uc001ips.2,uc001ipt.2,uc009xjz.1_5end | ||
|cluster_id=chr10:18429301..18429338,+ | |||
|coexpression_cluster_id=C3004 | |||
|description=CAGE_peak_1_at_CACNB2_5end | |description=CAGE_peak_1_at_CACNB2_5end | ||
|id=chr10:18429301..18429338,+ | |id=chr10:18429301..18429338,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.20e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-50!115;UBERON:0005743!9.46e-41!86;UBERON:0001017!5.14e-40!82;UBERON:0000073!3.93e-39!94;UBERON:0001016!3.93e-39!94;UBERON:0002346!2.55e-37!90;UBERON:0001049!8.25e-37!57;UBERON:0005068!8.25e-37!57;UBERON:0006241!8.25e-37!57;UBERON:0007135!8.25e-37!57;UBERON:0000955!8.54e-36!69;UBERON:0006238!8.54e-36!69;UBERON:0002616!1.17e-35!59;UBERON:0003075!1.64e-35!86;UBERON:0007284!1.64e-35!86;UBERON:0000153!2.59e-32!129;UBERON:0007811!2.59e-32!129;UBERON:0000033!4.19e-32!123;UBERON:0000924!3.51e-31!173;UBERON:0006601!3.51e-31!173;UBERON:0003080!1.59e-29!42;UBERON:0004121!1.73e-29!169;UBERON:0002780!3.40e-29!41;UBERON:0001890!3.40e-29!41;UBERON:0006240!3.40e-29!41;UBERON:0003056!2.56e-28!61;UBERON:0001893!4.00e-25!34;UBERON:0002020!5.19e-25!34;UBERON:0003528!5.19e-25!34;UBERON:0001869!1.07e-24!32;UBERON:0002791!2.18e-24!33;UBERON:0000956!4.02e-19!25;UBERON:0000203!4.02e-19!25;UBERON:0002619!9.66e-18!22;UBERON:0001950!5.59e-16!20;UBERON:0000481!1.59e-15!347;UBERON:0000475!1.71e-14!365;UBERON:0000468!2.25e-14!659;UBERON:0000922!7.14e-13!612;UBERON:0000062!3.94e-12!511;UBERON:0002050!7.74e-11!605;UBERON:0005423!7.74e-11!605;UBERON:0000064!1.33e-10!219;UBERON:0000923!1.91e-10!604;UBERON:0005291!1.91e-10!604;UBERON:0006598!1.91e-10!604;UBERON:0002532!1.91e-10!604;UBERON:0000483!2.23e-09!309;UBERON:0000477!3.14e-09!286;UBERON:0000119!5.91e-09!312;UBERON:0000467!1.11e-08!625;UBERON:0000480!1.45e-08!626;UBERON:0003076!1.87e-08!15;UBERON:0003057!1.87e-08!15;UBERON:0002420!5.62e-08!9;UBERON:0007245!5.62e-08!9;UBERON:0010009!5.62e-08!9;UBERON:0010011!5.62e-08!9;UBERON:0000454!5.62e-08!9;UBERON:0000059!8.27e-08!11;UBERON:0004111!1.17e-07!241;UBERON:0001871!2.42e-07!7;UBERON:0004733!2.52e-07!12;UBERON:0002028!2.52e-07!12;UBERON:0007277!2.52e-07!12;UBERON:0002308!2.53e-07!9;UBERON:0000125!2.53e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.62e-35;32!UBERON:0002791;6.19e-33;32!UBERON:0001893;7.46e-33;34!UBERON:0003528;1.18e-32;34!UBERON:0002020;1.18e-32;34!UBERON:0002780;2.72e-30;41!UBERON:0001890;2.72e-30;41!UBERON:0000956;5.96e-29;25!UBERON:0000203;5.96e-29;25!UBERON:0002619;2.26e-28;22!UBERON:0000073;7.70e-27;53!UBERON:0002616;7.70e-27;53!UBERON:0001950;1.82e-25;20!UBERON:0000955;3.54e-20;68!UBERON:0001017;4.60e-19;75!UBERON:0001016;2.82e-17;83!UBERON:0007023;1.13e-14;114!UBERON:0000160;1.17e-12;17!UBERON:0011216;1.19e-12;132!UBERON:0000059;3.15e-12;11!UBERON:0004921;3.57e-12;33!UBERON:0002420;8.62e-11;9!UBERON:0007245;8.62e-11;9!UBERON:0010009;8.62e-11;9!UBERON:0010011;8.62e-11;9!UBERON:0000454;8.62e-11;9!UBERON:0005409;2.29e-10;22!UBERON:0001871;2.89e-10;6!UBERON:0001155;4.86e-10;9!UBERON:0000125;1.21e-09;9!UBERON:0002308;1.21e-09;9!UBERON:0000349;7.84e-09;5!UBERON:0004733;1.71e-08;12!UBERON:0002028;1.71e-08;12!UBERON:0000200;4.24e-08;6!UBERON:0009663;4.74e-08;7!UBERON:0000369;1.06e-07;4!UBERON:0002435;1.06e-07;4!UBERON:0000204;1.06e-07;4!UBERON:0004732;1.12e-07;13!UBERON:0002021;2.06e-07;5!UBERON:0000922;3.10e-07;49!UBERON:0002298;7.65e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.48e-57,114;UBERON:0000073,2.37e-48,53;UBERON:0002616,2.37e-48,53;UBERON:0001049,7.62e-47,56;UBERON:0005068,7.62e-47,56;UBERON:0006241,7.62e-47,56;UBERON:0007135,7.62e-47,56;UBERON:0001016,9.28e-43,89;UBERON:0001017,1.18e-42,81;UBERON:0000955,3.79e-42,68;UBERON:0006238,3.79e-42,68;UBERON:0002780,6.48e-41,41;UBERON:0001890,6.48e-41,41;UBERON:0003080,6.48e-41,41;UBERON:0006240,6.48e-41,41;UBERON:0002346,1.09e-40,86;UBERON:0001869,4.23e-38,32;UBERON:0003075,1.39e-37,82;UBERON:0007284,1.39e-37,82;UBERON:0001893,2.22e-37,34;UBERON:0003528,3.36e-37,34;UBERON:0002020,3.36e-37,34;UBERON:0002791,2.02e-35,32;UBERON:0011216,2.32e-31,223;UBERON:0004121,3.47e-29,171;UBERON:0000924,3.47e-29,171;UBERON:0006601,3.47e-29,171;UBERON:0000956,7.36e-29,25;UBERON:0000203,7.36e-29,25;UBERON:0002619,2.02e-28,22;UBERON:0003056,6.19e-28,61;UBERON:0010371,6.43e-26,104;UBERON:0001950,1.74e-25,20;UBERON:0010314,8.65e-23,132;UBERON:0000160,7.74e-13,17;UBERON:0000059,2.34e-12,11;UBERON:0002050,6.34e-12,564;UBERON:0004111,9.06e-12,240;UBERON:0000923,1.17e-11,560;UBERON:0010316,1.17e-11,560;UBERON:0005291,1.17e-11,560;UBERON:0006598,1.17e-11,560;UBERON:0010317,1.17e-11,560;UBERON:0002532,1.17e-11,560;UBERON:0000922,4.23e-11,592;UBERON:0002420,1.03e-10,9;UBERON:0007245,1.03e-10,9;UBERON:0010009,1.03e-10,9;UBERON:0010011,1.03e-10,9;UBERON:0000454,1.03e-10,9;UBERON:0000025,1.26e-10,192;UBERON:0005423,1.39e-10,581;UBERON:0001871,3.76e-10,6;UBERON:0001155,4.37e-10,9;UBERON:0000125,1.04e-09,9;UBERON:0002308,1.04e-09,9;UBERON:0005409,7.91e-09,25;UBERON:0000349,7.99e-09,5;UBERON:0004733,9.91e-09,12;UBERON:0002028,9.91e-09,12;UBERON:0007277,9.91e-09,12;UBERON:0000200,3.41e-08,6;UBERON:0009663,5.35e-08,7;UBERON:0004732,6.84e-08,13;UBERON:0003076,7.01e-08,15;UBERON:0003057,7.01e-08,15;UBERON:0000369,1.11e-07,4;UBERON:0002435,1.11e-07,4;UBERON:0000204,1.11e-07,4;UBERON:0010082,1.11e-07,4;UBERON:0002021,1.90e-07,5;UBERON:0002298,4.24e-07,6 | |||
|phase1_expression=0.726713517082227,1.2846031433459,0,0,0.446961094427288,0,0,0,1.82829939739887,0,0,0,0,0.74259811776028,0.662794751455832,0,0,0,0,0.123121058076788,0.408001382488506,1.56727360739044,0.572471974262113,2.05311637609326,2.13422487311165,0,0,0,0,0,0,0,0,0,0,0,2.34880351467878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25199300053181,1.12101712596307,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.567208902984407,1.33037638477538,0.702678285545008,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,1.72101972449288,0.354668382198357,0.560677600142307,0,0,0.622422070799533,0,0.163461903113459,0.151357427644931,1.15235184896,0,0,0,0.149448680551801,0.469737994575059,0.647491777472526,0.280901613404497,1.02077085627447,0.368502951935304,0.723280468230358,0,0.247266929278557,0,0,0.673344455816265,1.37630371859161,0,0.438977620880838,0,0,0,0.179389635688862,0,0.423863802319124,0.300091096084402,0.103052529238439,0,0,0.675105328965065,0,1.26216887122057,0.368199594569197,0,0,0,0,0,0,0,1.09776335516636,0.530119073285941,0.69716365721711,0.621966330092223,1.00928340350251,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.686271241194102,0,0,0.100528972411631,0,0.325808305310325,0,0,1.15930404975077,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0,2.14466990487221,1.08524321078289,0.823240336780769,0.325736184293735,3.55391948742546,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,4.06551398755941,2.60279707715243,0,0.837581326671744,0.637938751653163,0,0,0,0.858840442033979,0,0.542530047399471,0,0,0,0.117141414992713,0.300946099727719,0,1.03473071292505,0,0.553107505625109,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.384417447767103,1.53512174720011,0.321707842287215,0,0,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.984043937099117,0,1.03041011647722,0,0,0,0,0,0.290012154876366,1.23238893691716,0.460511024178389,0.275673144969061,2.36324538710202,4.49551751134108,0.852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,1.33441135746677,0.255897791311334,0.855877976067841,0,0,2.33834194858309,4.11805544604082,2.47406044925942,0,0,0,0.48763373908959,0,0,0,0.848432591722276,0,0,0,0,0.578775534266688,2.62357900818653,0,0,0,0.430234056612155,0,0,0,0.211107635297664,0,0.379473173765715,0.349934720244983,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,7.95318118213038,5.06409899077846,0.111308705022906,0,0.422250816255987,5.18044769452781,3.59169090190492,0,0.20453736500431,0,0,0,0,0,12.1331388933428,0,0,4.84666373047609,2.04089815956073,1.99613798001194,0,0,0.724999575434793,0.1137934482855,0,0,0,2.91604613383254,0,10.6288966297661,14.2303797577981,1.52581736317083,3.53853631779919,2.06883333267483,2.4132393686937,0,0,5.38651809526579,0,0,0,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,6.70804783200482,9.95261931078505,4.5113357896703,3.66618086960175,0,0,0,1.14581926067151,1.60515529459758,3.27970224015475,0,0,0,6.70793484843964,6.04953580243319,3.0607276163049,3.98075451659474,0.60129367765797,0.518440956986236,0,0,0,0,0,0,0,0,0,5.2418000472609,0,0,0,0,5.33439590686307,0,0.677942222341597,0,0,2.78567502205866,0,0.0801588202515337,1.92107695265417,0.19980960958213,0,0,0,0,0.248505071130865,0,0,0,0,0.288950589901519,3.00210144354895,1.50595916781192,1.27746588066972,3.43812353135966,0,3.90995361781156,3.89572720819862,2.87149209830726,2.39614800598789,3.004582336956,2.90122894674434,9.54005309311513,0,0,0,0,0,0,0,14.3141344165675,5.99294986890933,1.28602518772015,0.962776056180637,0,0,3.0952078182318,4.00947073942963,0,0.236417121897595,0.314727528809989,0,0.717149357331379,0,0.714695326373367,3.97255182219259,0,0,1.72844298240254,0.653174720218818,0,0,0.340776043570843,0,0.293104467356165,0,1.80996138906171,1.45455861916959,0,0,2.13574825135389,1.57204305099666,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0.327872630709804,0,2.65820453990096,3.29470915235301,2.3786276834235,2.86704597845036,2.44043913381075,1.55241007353459,0.830091809617385,0.124980407962107,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0.378806010550178,0,0.889811221596536,0,0.453692771289717,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0.450772826991655,0,0,0,0.322231671127465,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,2.76516872303461,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68578179737669,1.07824811396682,3.45985072082972,0,0,12.32934536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| ||
|short_description=p1@CACNB2 | |short_description=p1@CACNB2 | ||
}} | }} |
Latest revision as of 11:51, 17 September 2015
Short description: | p1@CACNB2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CACNB2_5end |
Coexpression cluster: | C3004_smooth_putamen_bladder_vagina_neuroectodermal_caudate_salivary |
Association with transcript: | -267bp_to_ENST00000324631, NM_201593, NM_201596, NM_201597, uc001ipr.2, uc001ips.2, uc001ipt.2, uc009xjz.1_5end |
EntrezGene: | CACNB2 |
HGNC: | 1402 |
UniProt: | Q08289Q6TME3A6PVM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data