FFCP PHASE1:Hg19::chr7:158380524..158380532,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:158380524..158380532,- to FFCP PHASE1:Hg19::chr7:158380524..158380532,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5799 | |EntrezGene=5799 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9677 | |HGNC=9677 | ||
|TSSclassifier=strong | |||
|UniProt=Q92932,E9PC57,Q9Y4I6 | |UniProt=Q92932,E9PC57,Q9Y4I6 | ||
|association_with_transcript=-42bp_to_NM_002847,NM_130842,NM_130843,uc003wno.2,uc003wnp.2,uc003wnq.2,uc003wnr.2_5end | |||
|cluster_id=chr7:158380524..158380532,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_8_at_PTPRN2_5end | |||
|id=chr7:158380524..158380532,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.34e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.03e-68!57;UBERON:0005068!8.03e-68!57;UBERON:0006241!8.03e-68!57;UBERON:0007135!8.03e-68!57;UBERON:0001017!1.17e-62!82;UBERON:0000073!3.40e-60!94;UBERON:0001016!3.40e-60!94;UBERON:0005743!3.19e-59!86;UBERON:0002616!2.02e-58!59;UBERON:0002780!1.38e-57!41;UBERON:0001890!1.38e-57!41;UBERON:0006240!1.38e-57!41;UBERON:0000955!7.03e-57!69;UBERON:0006238!7.03e-57!69;UBERON:0003080!4.92e-56!42;UBERON:0001893!3.45e-49!34;UBERON:0002020!4.32e-49!34;UBERON:0003528!4.32e-49!34;UBERON:0002791!1.26e-46!33;UBERON:0001869!3.73e-45!32;UBERON:0003075!9.21e-44!86;UBERON:0007284!9.21e-44!86;UBERON:0002346!2.47e-41!90;UBERON:0002619!5.19e-37!22;UBERON:0003056!4.58e-36!61;UBERON:0007023!2.60e-35!115;UBERON:0001950!2.62e-32!20;UBERON:0000956!3.89e-32!25;UBERON:0000203!3.89e-32!25;UBERON:0004121!1.35e-29!169;UBERON:0000033!4.76e-29!123;UBERON:0000924!1.28e-28!173;UBERON:0006601!1.28e-28!173;UBERON:0000153!3.43e-27!129;UBERON:0007811!3.43e-27!129;UBERON:0002308!1.03e-18!9;UBERON:0000125!1.03e-18!9;UBERON:0000025!3.59e-16!194;UBERON:0002420!1.31e-14!9;UBERON:0007245!1.31e-14!9;UBERON:0010009!1.31e-14!9;UBERON:0010011!1.31e-14!9;UBERON:0000454!1.31e-14!9;UBERON:0009663!3.24e-14!7;UBERON:0003076!6.69e-13!15;UBERON:0003057!6.69e-13!15;UBERON:0001871!1.99e-12!7;UBERON:0000200!5.42e-12!6;UBERON:0004111!1.31e-11!241;UBERON:0002298!2.77e-11!8;UBERON:0004733!4.07e-10!12;UBERON:0002028!4.07e-10!12;UBERON:0007277!4.07e-10!12;UBERON:0002021!5.21e-10!5;UBERON:0001872!6.52e-10!5;UBERON:0001894!1.29e-09!7;UBERON:0006222!1.29e-09!7;UBERON:0000349!2.67e-09!5;UBERON:0004732!2.96e-09!13;UBERON:0002771!3.84e-09!3;UBERON:0000988!8.94e-09!3;UBERON:0000477!9.28e-09!286;UBERON:0000483!1.79e-08!309;UBERON:0006331!2.72e-08!3;UBERON:0000119!2.75e-08!312;UBERON:0000064!6.71e-08!219;UBERON:0000369!1.55e-07!4;UBERON:0002435!1.55e-07!4;UBERON:0000204!1.55e-07!4;UBERON:0010082!1.55e-07!4;UBERON:0002680!1.96e-07!9;UBERON:0001895!1.96e-07!9;UBERON:0010092!1.96e-07!9;UBERON:0000475!4.11e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.62e-65;32!UBERON:0001950;6.42e-62;20!UBERON:0002791;1.01e-60;32!UBERON:0001893;5.45e-59;34!UBERON:0002619;2.38e-56;22!UBERON:0003528;9.04e-53;34!UBERON:0002020;9.04e-53;34!UBERON:0000956;1.34e-49;25!UBERON:0000203;1.34e-49;25!UBERON:0002780;3.43e-45;41!UBERON:0001890;3.43e-45;41!UBERON:0000073;9.45e-33;53!UBERON:0002616;9.45e-33;53!UBERON:0000955;4.14e-28;68!UBERON:0002021;3.35e-26;5!UBERON:0001872;7.28e-26;5!UBERON:0001017;1.17e-25;75!UBERON:0000369;5.62e-19;4!UBERON:0002435;5.62e-19;4!UBERON:0000204;5.62e-19;4!UBERON:0009663;9.78e-19;7!UBERON:0001016;1.18e-18;83!UBERON:0002420;1.27e-14;9!UBERON:0000125;1.27e-14;9!UBERON:0007245;1.27e-14;9!UBERON:0002308;1.27e-14;9!UBERON:0010009;1.27e-14;9!UBERON:0010011;1.27e-14;9!UBERON:0000454;1.27e-14;9!UBERON:0000200;1.94e-12;6!UBERON:0005383;4.72e-12;3!UBERON:0005382;4.72e-12;3!UBERON:0001870;1.68e-11;3!UBERON:0001874;1.02e-09;1!UBERON:0002022;1.26e-09;1!UBERON:0002581;3.00e-09;1!UBERON:0002902;3.00e-09;1!UBERON:0001882;3.00e-09;1!UBERON:0009899;3.00e-09;1!UBERON:0007190;3.00e-09;1!UBERON:0005403;3.00e-09;1!UBERON:0011216;6.11e-09;132!UBERON:0007023;1.87e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.42e-75,32;UBERON:0001893,9.98e-71,34;UBERON:0002791,7.79e-67,32;UBERON:0002780,2.45e-65,41;UBERON:0001890,2.45e-65,41;UBERON:0003080,2.45e-65,41;UBERON:0006240,2.45e-65,41;UBERON:0003528,7.46e-63,34;UBERON:0002020,7.46e-63,34;UBERON:0001950,1.48e-61,20;UBERON:0000073,1.58e-61,53;UBERON:0002616,1.58e-61,53;UBERON:0001049,4.07e-58,56;UBERON:0005068,4.07e-58,56;UBERON:0006241,4.07e-58,56;UBERON:0007135,4.07e-58,56;UBERON:0000955,9.42e-57,68;UBERON:0006238,9.42e-57,68;UBERON:0002619,5.09e-56,22;UBERON:0000956,2.61e-49,25;UBERON:0000203,2.61e-49,25;UBERON:0001017,2.55e-47,81;UBERON:0003056,3.02e-43,61;UBERON:0001016,2.39e-42,89;UBERON:0003075,7.40e-39,82;UBERON:0007284,7.40e-39,82;UBERON:0002346,6.49e-37,86;UBERON:0010371,5.38e-30,104;UBERON:0002021,4.81e-26,5;UBERON:0001872,9.16e-26,5;UBERON:0010314,6.04e-23,132;UBERON:0004121,1.10e-20,171;UBERON:0000924,1.10e-20,171;UBERON:0006601,1.10e-20,171;UBERON:0007023,1.75e-19,114;UBERON:0000369,4.84e-19,4;UBERON:0002435,4.84e-19,4;UBERON:0000204,4.84e-19,4;UBERON:0010082,4.84e-19,4;UBERON:0009663,6.64e-19,7;UBERON:0011216,1.22e-16,223;UBERON:0002420,9.39e-15,9;UBERON:0000125,9.39e-15,9;UBERON:0007245,9.39e-15,9;UBERON:0002308,9.39e-15,9;UBERON:0010009,9.39e-15,9;UBERON:0010011,9.39e-15,9;UBERON:0000454,9.39e-15,9;UBERON:0000025,1.06e-14,192;UBERON:0000200,2.19e-12,6;UBERON:0005383,4.86e-12,3;UBERON:0005382,4.86e-12,3;UBERON:0001870,2.44e-11,3;UBERON:0004111,4.82e-11,240;UBERON:0001874,1.03e-09,1;UBERON:0002022,1.43e-09,1;UBERON:0007190,1.69e-09,1;UBERON:0001882,2.35e-09,1;UBERON:0005403,2.35e-09,1;UBERON:0002902,3.53e-09,1;UBERON:0009899,3.53e-09,1;UBERON:0002581,3.83e-09,1;UBERON:0000483,7.21e-08,306;UBERON:0000119,9.34e-08,309 | |||
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| ||
|short_description=p8@PTPRN2 | |||
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Latest revision as of 12:03, 17 September 2015
Short description: | p8@PTPRN2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PTPRN2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -42bp_to_NM_002847, NM_130842, NM_130843, uc003wno.2, uc003wnp.2, uc003wnq.2, uc003wnr.2_5end |
EntrezGene: | PTPRN2 |
HGNC: | 9677 |
UniProt: | Q92932E9PC57Q9Y4I6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data