FFCP PHASE1:Hg19::chr11:27528416..27528427,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=497258 | |EntrezGene=497258 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC=20608 | |HGNC=20608 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000499008,ENST00000499568,ENST00000500662,ENST00000501176,ENST00000502161,NR_002832,NR_033312,NR_033313,NR_033314,NR_033315,uc001mrm.2,uc001mrn.2,uc001mro.2,uc001mrp.2,uc001mrq.3,uc001mrr.3,uc009yij.2,uc009yik.2,uc009yil.2,uc009yim.2,uc009yin.2,uc009yio.2,uc009yip.2,uc009yiq.2,uc009yir.2,uc009yis.2,uc009yit.2,uc009yiu.2,uc009yiv.2,uc009yiw.2,uc009yix.2,uc009yiy.2,uc009yiz.2,uc009yja.2,uc009yjb.2_5end | |association_with_transcript=17bp_to_ENST00000499008,ENST00000499568,ENST00000500662,ENST00000501176,ENST00000502161,NR_002832,NR_033312,NR_033313,NR_033314,NR_033315,uc001mrm.2,uc001mrn.2,uc001mro.2,uc001mrp.2,uc001mrq.3,uc001mrr.3,uc009yij.2,uc009yik.2,uc009yil.2,uc009yim.2,uc009yin.2,uc009yio.2,uc009yip.2,uc009yiq.2,uc009yir.2,uc009yis.2,uc009yit.2,uc009yiu.2,uc009yiv.2,uc009yiw.2,uc009yix.2,uc009yiy.2,uc009yiz.2,uc009yja.2,uc009yjb.2_5end | ||
|cluster_id=chr11:27528416..27528427,+ | |||
|description=CAGE_peak_2_at_BDNF-AS1_5end | |description=CAGE_peak_2_at_BDNF-AS1_5end | ||
|id=chr11:27528416..27528427,+ | |id=chr11:27528416..27528427,+ | ||
Latest revision as of 12:21, 17 September 2015
| Short description: | p2@BDNF-AS1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_BDNF-AS1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 17bp_to_ENST00000499008, ENST00000499568, ENST00000500662, ENST00000501176, ENST00000502161, NR_002832, NR_033312, NR_033313, NR_033314, NR_033315, uc001mrm.2, uc001mrn.2, uc001mro.2, uc001mrp.2, uc001mrq.3, uc001mrr.3, uc009yij.2, uc009yik.2, uc009yil.2, uc009yim.2, uc009yin.2, uc009yio.2, uc009yip.2, uc009yiq.2, uc009yir.2, uc009yis.2, uc009yit.2, uc009yiu.2, uc009yiv.2, uc009yiw.2, uc009yix.2, uc009yiy.2, uc009yiz.2, uc009yja.2, uc009yjb.2_5end |
| EntrezGene: | BDNF-AS1 |
| HGNC: | 20608 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 6.21e-09 | 76 |
| bone element | 5.66e-08 | 82 |
| immune system | 2.23e-07 | 93 |
| skeletal element | 6.67e-07 | 90 |
