FFCP PHASE1:Hg19::chr4:30721968..30722034,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:30721968..30722034,+
|short_description=p1@PCDH7
|description=CAGE_peak_1_at_PCDH7_5end
|association_with_transcript=0bp_to_NM_032456_5end
|EntrezGene=509...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5099 | |EntrezGene=5099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8659 | |HGNC=8659 | ||
|TSSclassifier=strong | |||
|UniProt=O60245 | |UniProt=O60245 | ||
|association_with_transcript=0bp_to_NM_032456_5end | |||
|cluster_id=chr4:30721968..30722034,+ | |||
|coexpression_cluster_id=C2789 | |||
|description=CAGE_peak_1_at_PCDH7_5end | |||
|id=chr4:30721968..30722034,+ | |||
|ontology_enrichment_celltype=CL:0002076!4.19e-07!43;CL:0000325!8.63e-07!39 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.19e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!2.13e-22!219;UBERON:0000468!9.96e-22!659;UBERON:0000481!6.61e-21!347;UBERON:0000924!2.92e-20!173;UBERON:0006601!2.92e-20!173;UBERON:0002346!3.61e-20!90;UBERON:0004121!2.27e-19!169;UBERON:0003075!2.69e-19!86;UBERON:0007284!2.69e-19!86;UBERON:0000922!1.22e-18!612;UBERON:0005743!5.17e-18!86;UBERON:0000475!2.97e-17!365;UBERON:0001049!4.34e-17!57;UBERON:0005068!4.34e-17!57;UBERON:0006241!4.34e-17!57;UBERON:0007135!4.34e-17!57;UBERON:0002050!5.58e-17!605;UBERON:0005423!5.58e-17!605;UBERON:0007023!6.78e-17!115;UBERON:0000033!7.57e-17!123;UBERON:0001017!1.32e-16!82;UBERON:0003056!1.41e-16!61;UBERON:0000923!1.55e-16!604;UBERON:0005291!1.55e-16!604;UBERON:0006598!1.55e-16!604;UBERON:0002532!1.55e-16!604;UBERON:0002020!3.71e-16!34;UBERON:0003528!3.71e-16!34;UBERON:0000467!3.94e-16!625;UBERON:0001869!4.65e-16!32;UBERON:0001893!5.81e-16!34;UBERON:0000073!6.59e-16!94;UBERON:0001016!6.59e-16!94;UBERON:0000153!7.27e-16!129;UBERON:0007811!7.27e-16!129;UBERON:0000480!7.71e-16!626;UBERON:0000483!1.55e-15!309;UBERON:0000955!1.55e-15!69;UBERON:0006238!1.55e-15!69;UBERON:0002791!2.39e-15!33;UBERON:0002780!3.28e-15!41;UBERON:0001890!3.28e-15!41;UBERON:0006240!3.28e-15!41;UBERON:0002616!3.68e-15!59;UBERON:0003080!4.73e-15!42;UBERON:0002619!6.75e-15!22;UBERON:0000477!9.35e-15!286;UBERON:0000119!1.05e-14!312;UBERON:0001950!8.54e-14!20;UBERON:0000956!4.42e-13!25;UBERON:0000203!4.42e-13!25;UBERON:0000062!2.11e-12!511;UBERON:0004111!1.50e-11!241;UBERON:0000025!1.46e-09!194;UBERON:0000063!2.90e-09!97;UBERON:0004119!1.69e-08!169;UBERON:0000925!1.69e-08!169;UBERON:0006595!1.69e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.23e-15;22!UBERON:0001869;4.87e-15;32!UBERON:0003528;1.57e-14;34!UBERON:0002020;1.57e-14;34!UBERON:0002791;1.76e-14;32!UBERON:0001893;2.26e-14;34!UBERON:0001950;3.14e-14;20!UBERON:0000956;1.67e-13;25!UBERON:0000203;1.67e-13;25!UBERON:0002780;4.58e-11;41!UBERON:0001890;4.58e-11;41!UBERON:0000073;6.47e-09;53!UBERON:0002616;6.47e-09;53!UBERON:0000955;6.70e-08;68!UBERON:0001017;7.31e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.98e-20,86;UBERON:0003075,3.12e-19,82;UBERON:0007284,3.12e-19,82;UBERON:0004121,4.34e-19,171;UBERON:0000924,4.34e-19,171;UBERON:0006601,4.34e-19,171;UBERON:0010371,6.25e-18,104;UBERON:0001049,3.74e-17,56;UBERON:0005068,3.74e-17,56;UBERON:0006241,3.74e-17,56;UBERON:0007135,3.74e-17,56;UBERON:0003056,6.36e-17,61;UBERON:0003528,1.14e-16,34;UBERON:0002020,1.14e-16,34;UBERON:0001869,1.44e-16,32;UBERON:0001017,1.52e-16,81;UBERON:0011216,1.73e-16,223;UBERON:0001893,1.81e-16,34;UBERON:0007023,2.09e-16,114;UBERON:0000922,3.28e-16,592;UBERON:0000073,4.64e-16,53;UBERON:0002616,4.64e-16,53;UBERON:0002791,6.65e-16,32;UBERON:0000955,1.22e-15,68;UBERON:0006238,1.22e-15,68;UBERON:0002619,2.30e-15,22;UBERON:0002780,4.87e-15,41;UBERON:0001890,4.87e-15,41;UBERON:0003080,4.87e-15,41;UBERON:0006240,4.87e-15,41;UBERON:0001016,1.70e-14,89;UBERON:0002050,2.27e-14,564;UBERON:0001950,3.17e-14,20;UBERON:0005423,3.54e-14,581;UBERON:0000923,4.35e-14,560;UBERON:0010316,4.35e-14,560;UBERON:0005291,4.35e-14,560;UBERON:0006598,4.35e-14,560;UBERON:0010317,4.35e-14,560;UBERON:0002532,4.35e-14,560;UBERON:0000956,1.74e-13,25;UBERON:0000203,1.74e-13,25;UBERON:0000483,1.82e-13,306;UBERON:0000119,1.10e-12,309;UBERON:0010314,2.34e-12,132;UBERON:0004111,5.29e-10,240;UBERON:0000025,1.97e-08,192;UBERON:0004119,9.93e-08,160;UBERON:0000925,9.93e-08,160;UBERON:0006595,9.93e-08,160 | |||
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| ||
|short_description=p1@PCDH7 | |||
}} | }} |
Latest revision as of 13:20, 17 September 2015
Short description: | p1@PCDH7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDH7_5end |
Coexpression cluster: | C2789_aorta_Fibroblast_ductus_seminal_pharyngeal_amygdala_occipital |
Association with transcript: | 0bp_to_NM_032456_5end |
EntrezGene: | PCDH7 |
HGNC: | 8659 |
UniProt: | O60245 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.19e-07 | 42 |