FFCP PHASE1:Hg19::chr2:50574856..50574877,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9378 | |EntrezGene=9378 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8008 | |HGNC=8008 | ||
|TSSclassifier=strong | |||
|UniProt=P58400 | |UniProt=P58400 | ||
|association_with_transcript=14bp_to_ENST00000342183_5end | |association_with_transcript=14bp_to_ENST00000342183_5end | ||
|cluster_id=chr2:50574856..50574877,- | |||
|coexpression_cluster_id=C2702 | |||
|description=CAGE_peak_9_at_NRXN1_5end | |description=CAGE_peak_9_at_NRXN1_5end | ||
|id=chr2:50574856..50574877,- | |id=chr2:50574856..50574877,- | ||
|ontology_enrichment_celltype=CL:0000047!9.12e-09!8;CL:0002322!1.27e-08!5;CL:0000540!3.12e-08!6;CL:0000031!3.12e-08!6;CL:0000404!3.12e-08!6 | |ontology_enrichment_celltype=CL:0000047!9.12e-09!8;CL:0002322!1.27e-08!5;CL:0000540!3.12e-08!6;CL:0000031!3.12e-08!6;CL:0000404!3.12e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000540;7.50e-07;6!CL:0000404;7.50e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.46e-09,8;CL:0000540,6.69e-07,6;CL:0000031,6.69e-07,6;CL:0000404,6.69e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.62e-11;82!CL:0000031;7.50e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.99e-56!82;UBERON:0005743!1.44e-54!86;UBERON:0000073!2.69e-54!94;UBERON:0001016!2.69e-54!94;UBERON:0001049!5.71e-52!57;UBERON:0005068!5.71e-52!57;UBERON:0006241!5.71e-52!57;UBERON:0007135!5.71e-52!57;UBERON:0002780!9.00e-47!41;UBERON:0001890!9.00e-47!41;UBERON:0006240!9.00e-47!41;UBERON:0003080!1.98e-45!42;UBERON:0002616!1.48e-44!59;UBERON:0002346!2.21e-44!90;UBERON:0000955!9.55e-43!69;UBERON:0006238!9.55e-43!69;UBERON:0002619!6.37e-42!22;UBERON:0001869!3.09e-41!32;UBERON:0003075!3.24e-41!86;UBERON:0007284!3.24e-41!86;UBERON:0001893!3.38e-41!34;UBERON:0002020!5.46e-41!34;UBERON:0003528!5.46e-41!34;UBERON:0002791!2.03e-39!33;UBERON:0001950!2.45e-38!20;UBERON:0007023!5.26e-38!115;UBERON:0000956!3.15e-36!25;UBERON:0000203!3.15e-36!25;UBERON:0000924!5.98e-33!173;UBERON:0006601!5.98e-33!173;UBERON:0003056!9.15e-32!61;UBERON:0004121!2.28e-30!169;UBERON:0000033!3.76e-23!123;UBERON:0000153!1.12e-22!129;UBERON:0007811!1.12e-22!129;UBERON:0000025!3.66e-15!194;UBERON:0000200!3.71e-13!6;UBERON:0001871!3.72e-13!7;UBERON:0004111!4.83e-12!241;UBERON:0002021!1.85e-11!5;UBERON:0001872!3.45e-11!5;UBERON:0000349!8.47e-11!5;UBERON:0000477!3.96e-10!286;UBERON:0000483!6.22e-10!309;UBERON:0000119!1.09e-09!312;UBERON:0000922!4.59e-09!612;UBERON:0000064!1.41e-08!219;UBERON:0003076!1.76e-08!15;UBERON:0003057!1.76e-08!15;UBERON:0004732!6.82e-08!13;UBERON:0002420!1.62e-07!9;UBERON:0007245!1.62e-07!9;UBERON:0010009!1.62e-07!9;UBERON:0010011!1.62e-07!9;UBERON:0000454!1.62e-07!9;UBERON:0002771!1.85e-07!3;UBERON:0000468!3.38e-07!659;UBERON:0000475!4.75e-07!365;UBERON:0001894!5.01e-07!7;UBERON:0006222!5.01e-07!7;UBERON:0002308!5.22e-07!9;UBERON:0000125!5.22e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.73e-87;22!UBERON:0001950;1.13e-79;20!UBERON:0000956;1.78e-76;25!UBERON:0000203;1.78e-76;25!UBERON:0001869;6.40e-63;32!UBERON:0002791;3.94e-57;32!UBERON:0001893;4.54e-57;34!UBERON:0003528;3.27e-53;34!UBERON:0002020;3.27e-53;34!UBERON:0002780;3.24e-45;41!UBERON:0001890;3.24e-45;41!UBERON:0000073;2.82e-27;53!UBERON:0002616;2.82e-27;53!UBERON:0000200;6.18e-26;6!UBERON:0001871;1.41e-22;6!UBERON:0002021;3.06e-22;5!UBERON:0001872;7.48e-22;5!UBERON:0000955;1.37e-21;68!UBERON:0001017;4.93e-21;75!UBERON:0000349;7.90e-21;5!UBERON:0001016;2.07e-17;83!UBERON:0001870;7.45e-14;3!UBERON:0002771;4.24e-10;2!UBERON:0001905;6.77e-10;2!UBERON:0002757;6.77e-10;2!UBERON:0010134;6.77e-10;2!UBERON:0005408;6.77e-10;2!UBERON:0001899;6.77e-10;2!UBERON:0002702;1.07e-09;2!UBERON:0001876;1.28e-09;2!UBERON:0001954;5.34e-09;2!UBERON:0002133;5.34e-09;2!UBERON:0003022;5.34e-09;2!UBERON:0002421;5.34e-09;2!UBERON:0002600;5.34e-09;2!UBERON:0007023;1.27e-08;114!UBERON:0011216;7.13e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.30e-87,22;UBERON:0001950,1.29e-79,20;UBERON:0000956,1.60e-76,25;UBERON:0000203,1.60e-76,25;UBERON:0001869,1.25e-70,32;UBERON:0001893,2.93e-66,34;UBERON:0002791,8.82e-65,32;UBERON:0002780,2.39e-64,41;UBERON:0001890,2.39e-64,41;UBERON:0003080,2.39e-64,41;UBERON:0006240,2.39e-64,41;UBERON:0003528,9.34e-61,34;UBERON:0002020,9.34e-61,34;UBERON:0001017,5.43e-57,81;UBERON:0001016,8.25e-54,89;UBERON:0001049,1.94e-49,56;UBERON:0005068,1.94e-49,56;UBERON:0006241,1.94e-49,56;UBERON:0007135,1.94e-49,56;UBERON:0000073,1.21e-48,53;UBERON:0002616,1.21e-48,53;UBERON:0000955,4.86e-46,68;UBERON:0006238,4.86e-46,68;UBERON:0003056,5.54e-45,61;UBERON:0003075,5.57e-40,82;UBERON:0007284,5.57e-40,82;UBERON:0002346,8.10e-38,86;UBERON:0010371,2.31e-32,104;UBERON:0004121,9.59e-30,171;UBERON:0000924,9.59e-30,171;UBERON:0006601,9.59e-30,171;UBERON:0000200,7.21e-26,6;UBERON:0007023,4.82e-25,114;UBERON:0010314,4.50e-24,132;UBERON:0001871,1.41e-22,6;UBERON:0002021,2.68e-22,5;UBERON:0001872,9.92e-22,5;UBERON:0011216,4.15e-21,223;UBERON:0000349,6.53e-21,5;UBERON:0001870,7.29e-14,3;UBERON:0000025,2.68e-13,192;UBERON:0002771,4.34e-10,2;UBERON:0001905,5.93e-10,2;UBERON:0002757,5.93e-10,2;UBERON:0010134,5.93e-10,2;UBERON:0005408,5.93e-10,2;UBERON:0001899,5.93e-10,2;UBERON:0002702,1.10e-09,2;UBERON:0001876,1.15e-09,2;UBERON:0004111,2.65e-09,240;UBERON:0001954,4.15e-09,2;UBERON:0003022,4.15e-09,2;UBERON:0002421,4.15e-09,2;UBERON:0002600,4.15e-09,2;UBERON:0002133,6.05e-09,2;UBERON:0000483,1.26e-08,306;UBERON:0000119,1.80e-08,309 | |||
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| ||
|short_description=p9@NRXN1 | |short_description=p9@NRXN1 | ||
}} | }} |
Latest revision as of 13:31, 17 September 2015
Short description: | p9@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NRXN1_5end |
Coexpression cluster: | C2702_anaplastic_duodenum_parietal_occipital_brain_nonsmall_temporal |
Association with transcript: | 14bp_to_ENST00000342183_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | P58400 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.46e-09 | 8 |
neuron | 6.69e-07 | 6 |
neuroblast | 6.69e-07 | 6 |
electrically signaling cell | 6.69e-07 | 6 |