FFCP PHASE1:Hg19::chr16:68482370..68482375,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55512 | |EntrezGene=55512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14240 | |HGNC=14240 | ||
|TSSclassifier=strong | |||
|UniProt=A8K0T6,Q9NY59 | |UniProt=A8K0T6,Q9NY59 | ||
|association_with_transcript=33bp_to_NM_018667,uc002ewa.2_5end | |association_with_transcript=33bp_to_NM_018667,uc002ewa.2_5end | ||
|cluster_id=chr16:68482370..68482375,- | |||
|description=CAGE_peak_3_at_SMPD3_5end | |description=CAGE_peak_3_at_SMPD3_5end | ||
|id=chr16:68482370..68482375,- | |id=chr16:68482370..68482375,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002174;1.65e-10;1!CL:0000501;1.65e-10;1!CL:0000167;6.61e-10;1!CL:0000164;6.61e-10;1!CL:0000502;6.61e-10;1!CL:0000172;6.61e-10;1!CL:0000173;6.61e-10;1!CL:0000062;3.04e-09;9 | |ontology_enrichment_celltype_v019=CL:0002174;1.65e-10;1!CL:0000501;1.65e-10;1!CL:0000167;6.61e-10;1!CL:0000164;6.61e-10;1!CL:0000502;6.61e-10;1!CL:0000172;6.61e-10;1!CL:0000173;6.61e-10;1!CL:0000062;3.04e-09;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002174,1.65e-10,1;CL:0000501,1.65e-10,1;CL:0000167,6.91e-10,1;CL:0000164,6.91e-10,1;CL:0000502,6.91e-10,1;CL:0000172,6.91e-10,1;CL:0000173,6.91e-10,1;CL:0002351,6.91e-10,1;CL:0000062,1.16e-07,11;CL:0000375,1.16e-07,11;CL:0000335,1.16e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002351;6.61e-10;1!UBERON:0006222;6.61e-10;1!UBERON:0006242;6.61e-10;1!CL:0000335;1.19e-07;11 | |ontology_enrichment_development_v019=CL:0002351;6.61e-10;1!UBERON:0006222;6.61e-10;1!UBERON:0006242;6.61e-10;1!CL:0000335;1.19e-07;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4430;6.61e-10;1 | |ontology_enrichment_disease_v019=DOID:4430;6.61e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4430,6.91e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.18e-30!57;UBERON:0005068!8.18e-30!57;UBERON:0006241!8.18e-30!57;UBERON:0007135!8.18e-30!57;UBERON:0002780!1.72e-29!41;UBERON:0001890!1.72e-29!41;UBERON:0006240!1.72e-29!41;UBERON:0003080!1.32e-28!42;UBERON:0002616!1.78e-28!59;UBERON:0000073!2.13e-28!94;UBERON:0001016!2.13e-28!94;UBERON:0005743!9.93e-28!86;UBERON:0001017!2.21e-26!82;UBERON:0000955!1.28e-25!69;UBERON:0006238!1.28e-25!69;UBERON:0007023!1.71e-24!115;UBERON:0001893!2.04e-23!34;UBERON:0002020!3.32e-23!34;UBERON:0003528!3.32e-23!34;UBERON:0001869!4.85e-23!32;UBERON:0003075!7.01e-22!86;UBERON:0007284!7.01e-22!86;UBERON:0002791!7.08e-22!33;UBERON:0002346!1.95e-20!90;UBERON:0003056!2.59e-20!61;UBERON:0002619!3.37e-20!22;UBERON:0001950!8.41e-20!20;UBERON:0000956!1.90e-19!25;UBERON:0000203!1.90e-19!25;UBERON:0000033!9.45e-17!123;UBERON:0000153!2.02e-16!129;UBERON:0007811!2.02e-16!129;UBERON:0004121!1.92e-15!169;UBERON:0000924!8.71e-15!173;UBERON:0006601!8.71e-15!173;UBERON:0000200!2.04e-12!6;UBERON:0001894!1.43e-07!7;UBERON:0006222!1.43e-07!7;UBERON:0002021!4.05e-07!5;UBERON:0002771!9.67e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!8.18e-30!57;UBERON:0005068!8.18e-30!57;UBERON:0006241!8.18e-30!57;UBERON:0007135!8.18e-30!57;UBERON:0002780!1.72e-29!41;UBERON:0001890!1.72e-29!41;UBERON:0006240!1.72e-29!41;UBERON:0003080!1.32e-28!42;UBERON:0002616!1.78e-28!59;UBERON:0000073!2.13e-28!94;UBERON:0001016!2.13e-28!94;UBERON:0005743!9.93e-28!86;UBERON:0001017!2.21e-26!82;UBERON:0000955!1.28e-25!69;UBERON:0006238!1.28e-25!69;UBERON:0007023!1.71e-24!115;UBERON:0001893!2.04e-23!34;UBERON:0002020!3.32e-23!34;UBERON:0003528!3.32e-23!34;UBERON:0001869!4.85e-23!32;UBERON:0003075!7.01e-22!86;UBERON:0007284!7.01e-22!86;UBERON:0002791!7.08e-22!33;UBERON:0002346!1.95e-20!90;UBERON:0003056!2.59e-20!61;UBERON:0002619!3.37e-20!22;UBERON:0001950!8.41e-20!20;UBERON:0000956!1.90e-19!25;UBERON:0000203!1.90e-19!25;UBERON:0000033!9.45e-17!123;UBERON:0000153!2.02e-16!129;UBERON:0007811!2.02e-16!129;UBERON:0004121!1.92e-15!169;UBERON:0000924!8.71e-15!173;UBERON:0006601!8.71e-15!173;UBERON:0000200!2.04e-12!6;UBERON:0001894!1.43e-07!7;UBERON:0006222!1.43e-07!7;UBERON:0002021!4.05e-07!5;UBERON:0002771!9.67e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.36e-16;41!UBERON:0001890;1.36e-16;41!UBERON:0001869;1.06e-14;32!UBERON:0001950;1.61e-14;20!UBERON:0002791;5.13e-14;32!UBERON:0003528;1.01e-13;34!UBERON:0002020;1.01e-13;34!UBERON:0002619;3.21e-13;22!UBERON:0001893;1.67e-12;34!UBERON:0000073;7.20e-12;53!UBERON:0002616;7.20e-12;53!UBERON:0000956;1.21e-11;25!UBERON:0000203;1.21e-11;25!UBERON:0002581;6.61e-10;1!UBERON:0001882;6.61e-10;1!UBERON:0002022;6.61e-10;1!UBERON:0005403;6.61e-10;1!UBERON:0000369;1.66e-09;4!UBERON:0002435;1.66e-09;4!UBERON:0000204;1.66e-09;4!UBERON:0002108;5.59e-08;4!UBERON:0001872;6.42e-08;5!UBERON:0000955;2.76e-07;68 | |ontology_enrichment_uberon_v019=UBERON:0002780;1.36e-16;41!UBERON:0001890;1.36e-16;41!UBERON:0001869;1.06e-14;32!UBERON:0001950;1.61e-14;20!UBERON:0002791;5.13e-14;32!UBERON:0003528;1.01e-13;34!UBERON:0002020;1.01e-13;34!UBERON:0002619;3.21e-13;22!UBERON:0001893;1.67e-12;34!UBERON:0000073;7.20e-12;53!UBERON:0002616;7.20e-12;53!UBERON:0000956;1.21e-11;25!UBERON:0000203;1.21e-11;25!UBERON:0002581;6.61e-10;1!UBERON:0001882;6.61e-10;1!UBERON:0002022;6.61e-10;1!UBERON:0005403;6.61e-10;1!UBERON:0000369;1.66e-09;4!UBERON:0002435;1.66e-09;4!UBERON:0000204;1.66e-09;4!UBERON:0002108;5.59e-08;4!UBERON:0001872;6.42e-08;5!UBERON:0000955;2.76e-07;68 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,5.42e-19,41;UBERON:0001890,5.42e-19,41;UBERON:0003080,5.42e-19,41;UBERON:0006240,5.42e-19,41;UBERON:0002791,1.13e-15,32;UBERON:0001869,1.13e-15,32;UBERON:0003528,1.01e-14,34;UBERON:0002020,1.01e-14,34;UBERON:0001893,1.01e-14,34;UBERON:0000073,1.94e-14,53;UBERON:0002616,1.94e-14,53;UBERON:0001950,2.03e-14,20;UBERON:0001049,1.34e-13,56;UBERON:0005068,1.34e-13,56;UBERON:0006241,1.34e-13,56;UBERON:0007135,1.34e-13,56;UBERON:0002619,3.96e-13,22;UBERON:0003056,2.21e-12,61;UBERON:0000956,1.45e-11,25;UBERON:0000203,1.45e-11,25;UBERON:0001017,7.35e-11,81;UBERON:0000955,8.59e-11,68;UBERON:0006238,8.59e-11,68;UBERON:0002581,6.33e-10,1;UBERON:0002022,9.82e-10,1;UBERON:0001882,1.07e-09,1;UBERON:0005403,1.07e-09,1;UBERON:0001016,1.26e-09,89;UBERON:0000369,1.97e-09,4;UBERON:0002435,1.97e-09,4;UBERON:0000204,1.97e-09,4;UBERON:0010082,1.97e-09,4;UBERON:0003075,7.29e-09,82;UBERON:0007284,7.29e-09,82;UBERON:0002346,2.19e-08,86;UBERON:0002108,4.78e-08,4;UBERON:0001872,6.31e-08,5 | |||
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| ||
|short_description=p3@SMPD3 | |short_description=p3@SMPD3 | ||
}} | }} |
Latest revision as of 13:45, 17 September 2015
Short description: | p3@SMPD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMPD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_NM_018667, uc002ewa.2_5end |
EntrezGene: | SMPD3 |
HGNC: | 14240 |
UniProt: | A8K0T6Q9NY59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 1.65e-10 | 1 |
granulosa cell | 1.65e-10 | 1 |
peptide hormone secreting cell | 6.91e-10 | 1 |
enteroendocrine cell | 6.91e-10 | 1 |
type D enteroendocrine cell | 6.91e-10 | 1 |
somatostatin secreting cell | 6.91e-10 | 1 |
pancreatic D cell | 6.91e-10 | 1 |
progenitor cell of endocrine pancreas | 6.91e-10 | 1 |
osteoblast | 1.16e-07 | 11 |
osteoprogenitor cell | 1.16e-07 | 11 |
mesenchyme condensation cell | 1.16e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 6.91e-10 | 1 |