FFCP PHASE1:Hg19::chr20:62371185..62371196,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:62371185..62371196,+ to FFCP PHASE1:Hg19::chr20:62371185..62371196,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56731 | |EntrezGene=56731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15930 | |HGNC=15930 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR83 | |UniProt=Q9NR83 | ||
|association_with_transcript=-14bp_to_NM_020062,uc002ygq.2_5end | |||
|cluster_id=chr20:62371185..62371196,+ | |||
|description=CAGE_peak_11_at_SLC2A4RG_5end | |||
|id=chr20:62371185..62371196,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.96e-14!254;CL:0000223!5.97e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.81e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.40e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.92e-11;11!UBERON:0001041;1.73e-10;30!UBERON:0009497;2.34e-09;13!UBERON:0003104;7.07e-08;31 | |||
|ontology_enrichment_disease=DOID:305!2.77e-10!106;DOID:0050687!3.71e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.03e-07;4!DOID:1612;4.03e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.47e-07,4;DOID:1612,2.47e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.60e-14!169;UBERON:0000925!9.60e-14!169;UBERON:0006595!9.60e-14!169;UBERON:0001007!1.84e-12!155;UBERON:0001555!1.84e-12!155;UBERON:0007026!1.84e-12!155;UBERON:0000077!4.30e-11!130;UBERON:0003104!3.47e-09!238;UBERON:0009142!3.47e-09!238;UBERON:0004921!5.85e-09!129;UBERON:0004185!5.85e-09!129;UBERON:0005177!5.24e-08!107;UBERON:0005911!1.80e-07!82;UBERON:0003929!1.87e-07!54;UBERON:0001041!3.01e-07!98;UBERON:0001004!5.13e-07!72;UBERON:0002100!8.17e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;2.12e-09;31!UBERON:0002330;2.12e-09;31!UBERON:0001723;6.91e-09;3!UBERON:0001033;6.91e-09;3!UBERON:0002107;7.91e-08;19!UBERON:0006925;7.91e-08;19!UBERON:0002423;4.34e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,4.01e-10,31;UBERON:0002330,4.01e-10,31;UBERON:0009569,9.05e-10,112;UBERON:0001723,1.14e-08,3;UBERON:0001033,1.14e-08,3;UBERON:0010056,1.14e-08,3;UBERON:0005177,2.36e-08,101;UBERON:0002530,6.27e-08,59;UBERON:0005911,7.07e-08,82;UBERON:0005172,7.27e-08,54;UBERON:0005173,7.27e-08,54;UBERON:0002107,7.67e-08,19;UBERON:0006925,7.67e-08,19;UBERON:0008836,7.67e-08,19;UBERON:0001041,2.88e-07,87;UBERON:0007499,4.13e-07,25;UBERON:0009497,5.20e-07,25;UBERON:0000015,5.20e-07,25;UBERON:0002423,5.20e-07,25;UBERON:0006235,5.20e-07,25;UBERON:0004161,5.20e-07,25;UBERON:0009856,8.99e-07,26;UBERON:0002417,9.68e-07,60;UBERON:0000916,9.68e-07,60 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,1.04474251279935,0,0,0.655324116390517,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.572471974262113,0.410623275218653,0.502170558379211,0,0.0821005894499457,0.157421562627358,0,0,0,0,0.30120591877825,1.10926203050036,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0.328875809207352,0.829050053357545,0.289803085735052,0,0,1.04535523804977,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0.639312809217652,0,0,0.579386075843295,0,0,0.378139268656271,0.221729397462564,0.527008714158756,0.458426764241994,0.364295288292542,0.370784442784429,0,0.174129737299267,0,0,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0.419499436209906,0.825354125820202,0.417989933073621,0,0.35576626268671,0,0,0,0.732186172644509,0,0.81014194788176,0.446498641420399,0.22452937262617,0.337834441449967,0,0.949265659568129,0.549605231791222,0,0,0,0.496971951695318,0.633152558322899,0.264818361626438,0,0.709336764396714,0.560677600142307,0,0.74000264525148,1.24484414159907,0.134710672069688,0.163461903113459,0.454072282934794,0.576175924479999,0.70296429550139,0,0,0.149448680551801,0.23486899728753,0,0,0.408308342509787,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,1.82032272387605,0.718618141816238,0.336672227908132,0.375355559615893,0.277064115484183,0.877955241761676,0.30648779579902,0.751190294532984,0.453728732640084,0,0.427114777637135,0.423863802319124,0,0,0,0.558350568994769,0,0.292311015483596,0,0.368199594569197,0.646584227275248,0,0,0,0.193260853163297,0.272746120590835,0.573609190778008,0.487894824518382,0.795178609928912,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0.643240938192885,0,0,0,0.473227200159376,0.337169380156203,0.964044119533928,0.441175890929576,0.435758888184812,0,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,0,1.10689594688802,0.171567810298526,0.439001141634502,0,0.502644862058154,0.740707561268237,0.977424915930974,0,0,0.231860809950154,0.117408694235822,0.433099343283221,0,0.380508304469197,3.1608175918371,0,0,0,0.148631162288728,0,0.335964256397719,0,0.53735113621709,0.581267877027924,2.68367875415648,0,0,0,0,0.37872730027914,0.253991577168676,0,0,0,0.102827492703324,0.901029173531752,0.285826432630578,0.224262168690721,0.87192013766656,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0.224170287987055,0,0.215627574859517,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,0,1.03985430765404,0.713715955188647,0.473107245101804,0.35142424497814,0.902838299183157,0,1.03473071292505,0,0.553107505625109,0.260650843404249,0.391602314925481,0.686286847621712,0.206768026122887,0,0.106727557803444,0.606255142892519,0,0.907170879989041,0,0,0.841980283299221,0,0,0.321707842287215,0,0.462629081407967,0.355123450626254,0.0821271560138091,0.519254429183621,0.348631135379878,1.45031339509947,0.200506470303285,0.920809889358963,0.229628896329213,0.182091168006717,1.04899531967539,0.451199612907412,0.15403067420883,2.35304930753057,4.38417673959782,0.633309773357254,0,0.510281115829547,0,3.08454505380579,0.270946437543853,1.50506932156456,0.254876273045038,0,0.447749509444357,0,0.261435451024901,0,0,0,1.64865618636356,0.27470839445503,0.165018999841176,0.574265537996172,1.30012049207304,0,0.48335359146061,0.308097234229289,0.15350367472613,0.551346289938122,0.214840489736547,0.290033387828457,0.596586391912706,0.534192213880424,0.661139661443912,0.960950336825531,0.510450849978337,1.51736671283325,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.632758849437452,0.190630193923825,0.511795582622668,0,0,0,0.359744915166629,0,0.589062011728432,0.404364963146632,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.565621727814851,1.13008116620243,1.10273068709225,0,0.438450885253763,0.578775534266688,0.655894752046633,0.405820753925408,0,0,0.143411352204052,0.294747123039363,0,0.709522128141196,0.633322905892992,0.329294892959902,0.379473173765715,1.39973888097993,0.577332676353072,0.670302275535787,0,0.941438007767792,0,0,0.443430153536676,0.459446800413919,0,0,0.569647187174163,0,0,0,0,0,0.640944426764839,0,0.735120647943095,0.185803175125719,0.28853842595289,0.0711418433484141,0,0.399158742865633,0,0,0,0,0.228234679033192,0.313359791546046,0,0.338583555603207,0.1605880751037,0.201799707191048,0.425846237690326,0.687010689511529,0,0,0.667396566847634,0.19538809540204,0,0,0,0,0,1.49712432326576,1.02555725490326,0.1213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| ||
|short_description=p11@SLC2A4RG | |||
}} | }} |
Latest revision as of 14:11, 17 September 2015
Short description: | p11@SLC2A4RG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC2A4RG_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_NM_020062, uc002ygq.2_5end |
EntrezGene: | SLC2A4RG |
HGNC: | 15930 |
UniProt: | Q9NR83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.40e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 4.01e-10 | 31 |
exocrine system | 4.01e-10 | 31 |
subdivision of trunk | 9.05e-10 | 112 |
tongue | 1.14e-08 | 3 |
gustatory system | 1.14e-08 | 3 |
future tongue | 1.14e-08 | 3 |
trunk region element | 2.36e-08 | 101 |
gland | 6.27e-08 | 59 |
endo-epithelium | 7.07e-08 | 82 |
abdomen element | 7.27e-08 | 54 |
abdominal segment element | 7.27e-08 | 54 |
liver | 7.67e-08 | 19 |
digestive gland | 7.67e-08 | 19 |
liver bud | 7.67e-08 | 19 |
foregut | 2.88e-07 | 87 |
epithelial sac | 4.13e-07 | 25 |
epithelium of foregut-midgut junction | 5.20e-07 | 25 |
anatomical boundary | 5.20e-07 | 25 |
hepatobiliary system | 5.20e-07 | 25 |
foregut-midgut junction | 5.20e-07 | 25 |
septum transversum | 5.20e-07 | 25 |
sac | 8.99e-07 | 26 |
abdominal segment of trunk | 9.68e-07 | 60 |
abdomen | 9.68e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.47e-07 | 4 |
breast cancer | 2.47e-07 | 4 |