FFCP PHASE2:Hg19::chr1:156030937..156030983,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:57111 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:18238 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=57111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=18238 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P57735 | ||
|association_with_transcript=0bp_to_ENST00000361084,ENST00000463614,NM_020387,uc001fnc.2_5end | |association_with_transcript=0bp_to_ENST00000361084,ENST00000463614,NM_020387,uc001fnc.2_5end | ||
|cluster_id=chr1:156030937..156030983,+ | |cluster_id=chr1:156030937..156030983,+ |
Latest revision as of 14:31, 17 September 2015
Short description: | p1@RAB25 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB25_5end |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | 0bp_to_ENST00000361084, ENST00000463614, NM_020387, uc001fnc.2_5end |
EntrezGene: | RAB25 |
HGNC: | 18238 |
UniProt: | P57735 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@RAB25 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 6.44e-25 | 253 |
endo-epithelial cell | 2.71e-22 | 42 |
endodermal cell | 5.37e-16 | 58 |
epithelial cell of alimentary canal | 1.44e-11 | 20 |
respiratory epithelial cell | 3.55e-10 | 13 |
general ecto-epithelial cell | 4.26e-09 | 14 |
epithelial cell of tracheobronchial tree | 6.18e-08 | 9 |
epithelial cell of lower respiratory tract | 6.18e-08 | 9 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
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endoderm-derived structure | 2.44e-24 | 160 |
endoderm | 2.44e-24 | 160 |
presumptive endoderm | 2.44e-24 | 160 |
digestive system | 3.22e-18 | 145 |
digestive tract | 3.22e-18 | 145 |
primitive gut | 3.22e-18 | 145 |
subdivision of digestive tract | 2.92e-16 | 118 |
respiratory system | 2.58e-12 | 74 |
endo-epithelium | 5.38e-11 | 82 |
renal system | 7.63e-11 | 48 |
Showing 1 to 10 of 28 entries
Ontology term | p-value | n |
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carcinoma | 1.36e-14 | 106 |
squamous cell carcinoma | 2.13e-10 | 14 |
cell type cancer | 1.86e-09 | 143 |
adenocarcinoma | 6.14e-08 | 25 |
Showing 1 to 4 of 4 entries