FFCP PHASE1:Hg19::chr12:15942639..15942659,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:15942639..15942659,- to FFCP PHASE1:Hg19::chr12:15942639..15942659,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2059 | |EntrezGene=2059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3420 | |HGNC=3420 | ||
|TSSclassifier=strong | |||
|UniProt=Q12929,F5H819,B4E3T6 | |UniProt=Q12929,F5H819,B4E3T6 | ||
|association_with_transcript=-129bp_to_ENST00000281172,ENST00000543223,NM_004447,uc001rdb.2,uc009zig.2_5end | |||
|cluster_id=chr12:15942639..15942659,- | |||
|description=CAGE_peak_7_at_EPS8_5end | |||
|id=chr12:15942639..15942659,- | |||
|ontology_enrichment_celltype=CL:0000055!1.20e-11!180;CL:0000136!5.23e-10!15;CL:0000057!9.54e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.00e-17;13!CL:0000680;1.77e-10;7!CL:0000708;1.57e-07;3!CL:0002590;1.79e-07;3!CL:0002564;1.95e-07;3!CL:0002615;3.38e-07;3!CL:0000594;3.38e-07;3!CL:0000515;7.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.56e-15,15;CL:0002590,1.54e-07,3;CL:0000708,1.58e-07,3;CL:0000594,2.87e-07,3;CL:0002564,3.39e-07,3;CL:0002615,6.32e-07,3;CL:0000680,9.09e-07,58;CL:0000056,9.09e-07,58;CL:0000355,9.09e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.55e-11!365;UBERON:0000481!2.25e-09!347;UBERON:0002100!2.85e-08!216;UBERON:0005256!1.55e-07!143;UBERON:0000468!4.83e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;7.51e-12;5!UBERON:0001134;8.14e-09;16!UBERON:0002036;8.14e-09;16!UBERON:0003688;1.36e-08;6!UBERON:0002358;1.36e-08;6!UBERON:0003684;1.36e-08;6!UBERON:0001178;1.36e-08;6!UBERON:0003210;1.57e-07;3!UBERON:0002242;1.95e-07;3!UBERON:0011135;3.33e-07;5!UBERON:0002216;3.33e-07;5!UBERON:0011134;3.33e-07;5!UBERON:0002209;3.33e-07;5!UBERON:0002213;3.33e-07;5!UBERON:0007844;3.33e-07;5!UBERON:0011138;3.33e-07;5!UBERON:0001130;3.33e-07;5!UBERON:0001066;3.33e-07;5!UBERON:0001468;3.33e-07;5!UBERON:0006876;6.83e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,6.65e-12,5;UBERON:0003104,1.30e-08,160;UBERON:0009142,1.30e-08,160;UBERON:0002385,1.96e-08,64;UBERON:0001015,1.96e-08,64;UBERON:0000383,1.96e-08,64;UBERON:0003688,2.25e-08,6;UBERON:0002358,2.25e-08,6;UBERON:0003684,2.25e-08,6;UBERON:0001178,2.25e-08,6;UBERON:0002329,8.21e-08,71;UBERON:0003059,8.21e-08,71;UBERON:0007282,8.21e-08,71;UBERON:0004290,8.21e-08,71;UBERON:0009618,8.21e-08,71;UBERON:0001134,8.58e-08,62;UBERON:0002036,8.58e-08,62;UBERON:0003082,8.58e-08,62;UBERON:0003077,1.24e-07,72;UBERON:0007285,1.24e-07,72;UBERON:0003210,1.58e-07,3;UBERON:0007524,1.86e-07,73;UBERON:0011135,2.95e-07,5;UBERON:0002216,2.95e-07,5;UBERON:0011134,2.95e-07,5;UBERON:0002209,2.95e-07,5;UBERON:0002213,2.95e-07,5;UBERON:0005856,2.95e-07,5;UBERON:0005866,2.95e-07,5;UBERON:0005863,2.95e-07,5;UBERON:0007844,2.95e-07,5;UBERON:0011138,2.95e-07,5;UBERON:0001130,2.95e-07,5;UBERON:0001066,2.95e-07,5;UBERON:0001468,2.95e-07,5;UBERON:0002242,3.39e-07,3;UBERON:0003068,3.39e-07,3;UBERON:0002328,3.39e-07,3;UBERON:0004880,3.39e-07,3;UBERON:0006876,4.81e-07,11;UBERON:0005256,6.32e-07,122 | |||
|phase1_expression=7.08545679155171,1.92690471501885,2.96004248601539,1.0007329835313,2.68176656656373,1.74467704820074,2.53299878168311,0.631719873426831,1.56711376919903,0,0,0,0,1.8564952944007,0.994192127183747,0,0,0,0,0.246242116153576,1.02000345622126,0,0.286235987131057,0.136874425072884,1.00434111675842,0,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,0.511450247374121,0.722878304769133,0.50133791063589,1.44846518960824,0,0.486634870302636,0.378139268656271,0,0.351339142772504,0.523916301990851,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,1.14734648299525,0.354668382198357,0.560677600142307,0,0,4.35695449559673,0.942974704487816,1.79808093424805,12.1085942115945,21.89468513024,0.70296429550139,0.624320153660641,0.570471821544449,1.04614076386261,0.352303495931295,0.485618833104395,0.140450806702248,0.408308342509787,0,0.723280468230358,0,0.247266929278557,0.910161361938026,0,0,0.375355559615893,0.554128230968366,0,0,0.150238058906597,0.340296549480063,0.358779271377724,0.427114777637135,0.847727604638247,0.600182192168805,0.309157587715317,3.09168648054755,0.744467425326359,0.506328996723799,0.68205903612839,0,0.644349290496095,0.484938170456436,0.355009592516614,0.302256294682921,0.67824236924195,0,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0.220587945464788,0,0.237270619111097,0.269662616320329,0,1.15424147083917,0,0,0,0,2.53510069643662,0,1.18157981336281,0,0.860919069801795,0.171567810298526,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0.93733833986777,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0.317489471460845,0.381988425558278,0,1.71072446022705,0.205654985406647,0.300343057843917,0,6.72786506072164,1.30788020649984,10.267360014933,0.258543431515556,10.7296933755565,0.845302752556,0.797814349754612,1.04007436911366,1.80045161983499,1.41849132023278,0.799266537048298,6.71996570193294,1.08524321078289,0,0.65147236858747,7.10783897485092,0,0,0.871533458600294,0.099972991182057,0,0,0,1.19812427745791,1.14861935834114,0,1.44781306667579,2.67119219315498,1.61154866915906,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,4.04881922673162,4.00136416847742,1.08506009479894,0,0.356857977594324,0.315404830067869,0.585707074963566,1.50473049863859,0,1.03473071292505,1.32845119707087,0.737476674166813,0.0868836144680828,4.50342662164303,3.43143423810856,0,0,0,0,0,0,3.96972492510043,0.61384789315225,0.561320188866147,1.79394808957981,1.02341449813341,0.321707842287215,0,0,0.355123450626254,0.246381468041427,0,0.581051892299796,0.725156697549733,0.200506470303285,0,0.574072240823034,0.364182336013434,0.655622074797121,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,1.13345112812495,0,0,0,0,0,0.580024309752732,1.54048617114644,0.614014698904518,0.689182862422653,2.25582514223375,2.17525040871343,1.44885266607372,0.890320356467374,0.165284915360978,0,0.127612712494584,0.50578890427775,0.464845549297286,0.31481234683064,0,0,0,0,0,0.286249773483982,12.281226188869,3.48017367190598,1.33441135746677,0,0.855877976067841,0.95460974377781,0,0.899362287916574,1.09814811894422,0.942499218765491,0,0,0,0,0,0,1.09199929126389,1.27264888758341,1.13008116620243,0,0.66343897524122,0,0,1.31178950409327,0,0.30982349809975,0.281695602532241,0.143411352204052,1.08073945114433,0.35667105148125,1.06428319221179,0.844430541190656,0,0,1.74967360122491,0.192444225451024,0,0,0.847294206991012,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,2.63714722689409,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0.19924798825107,0.552567831062295,0.251932747854276,0.102268682502155,0,0.311039587661807,0.449341755736634,0.716084698702437,0,1.57829449019094,0,2.22273980289274,0,0,0,0.260427761085233,0.0874599999961957,0.724999575434793,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0.331737779793674,0,0,0,0.139423744278603,1.69290568708354,0,0,0.359030577639089,0.217294743844016,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14994833854341,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0.19566461893209,0,0.394584402849391,0,0,1.76922422959766,0,0,0.664653872707185,0,0,0,0.569219092059585,0,0,0,0.522355239482415,0.34945333648406,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0.397429223405979,0.189932387867636,0.195551382734803,0,1.28071796843612,0,0.144090417154106,0,0,0,0,0.707082103850386,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,1.11712960508902,0.916641696046735,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| 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| ||
|short_description=p7@EPS8 | |||
}} | }} |
Latest revision as of 15:19, 17 September 2015
Short description: | p7@EPS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EPS8_5end |
Coexpression cluster: | NA |
Association with transcript: | -129bp_to_ENST00000281172, ENST00000543223, NM_004447, uc001rdb.2, uc009zig.2_5end |
EntrezGene: | EPS8 |
HGNC: | 3420 |
UniProt: | Q12929F5H819B4E3T6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.56e-15 | 15 |
smooth muscle cell of the brain vasculature | 1.54e-07 | 3 |
leptomeningeal cell | 1.58e-07 | 3 |
skeletal muscle satellite cell | 2.87e-07 | 3 |
nucleus pulposus cell of intervertebral disc | 3.39e-07 | 3 |
adipocyte of omentum tissue | 6.32e-07 | 3 |
muscle precursor cell | 9.09e-07 | 58 |
myoblast | 9.09e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.09e-07 | 58 |