FFCP PHASE1:Hg19::chr2:54785896..54785918,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:54785896..54785918,+ to FFCP PHASE1:Hg19::chr2:54785896..54785918,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6711 | |EntrezGene=6711 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11275 | |HGNC=11275 | ||
|TSSclassifier=strong | |||
|UniProt=Q01082 | |UniProt=Q01082 | ||
|association_with_transcript=365bp_to_ENST00000333896,NM_178313,uc002rxx.2_5end | |||
|cluster_id=chr2:54785896..54785918,+ | |||
|description=CAGE_peak_8_at_SPTBN1_5end | |||
|id=chr2:54785896..54785918,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.09e-25!254;CL:0000220!4.36e-13!246;CL:0002321!6.40e-13!248;CL:0000076!1.92e-10!62;CL:0000223!1.50e-09!59;CL:0002076!1.89e-08!43;CL:0000548!5.53e-07!679;CL:0000004!5.53e-07!679;CL:0000255!5.53e-07!679;CL:0000077!8.00e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.83e-08;42!CL:0000077;8.19e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.06e-26,253;CL:0002321,6.83e-13,250;CL:0000076,1.24e-10,63;CL:0000223,2.38e-10,58;CL:0002076,4.27e-09,42;CL:0000077,6.18e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.85e-08!106;DOID:0050687!1.05e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.99e-08,106;DOID:0050687,6.60e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.51e-14!169;UBERON:0000925!8.51e-14!169;UBERON:0006595!8.51e-14!169;UBERON:0001007!1.83e-11!155;UBERON:0001555!1.83e-11!155;UBERON:0007026!1.83e-11!155;UBERON:0004921!9.46e-10!129;UBERON:0004185!9.46e-10!129;UBERON:0003104!1.76e-09!238;UBERON:0009142!1.76e-09!238;UBERON:0000077!2.34e-09!130;UBERON:0003914!3.41e-08!118;UBERON:0001048!4.62e-08!168;UBERON:0005911!1.74e-07!82;UBERON:0004872!1.78e-07!84;UBERON:0001041!4.40e-07!98;UBERON:0000490!5.73e-07!138;UBERON:0001444!6.66e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;4.39e-07;31!UBERON:0002330;4.39e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.40e-14,160;UBERON:0000925,2.40e-14,160;UBERON:0006595,2.40e-14,160;UBERON:0001007,2.05e-12,145;UBERON:0001555,2.05e-12,145;UBERON:0007026,2.05e-12,145;UBERON:0004921,6.54e-11,118;UBERON:0003914,6.45e-09,117;UBERON:0001048,3.61e-08,160;UBERON:0001041,7.14e-08,87;UBERON:0005911,9.02e-08,82;UBERON:0004872,1.71e-07,83;UBERON:0002365,3.17e-07,31;UBERON:0002330,3.17e-07,31;UBERON:0001444,8.58e-07,49 | |||
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| ||
|short_description=p8@SPTBN1 | |||
}} | }} |
Latest revision as of 15:50, 17 September 2015
Short description: | p8@SPTBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SPTBN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 365bp_to_ENST00000333896, NM_178313, uc002rxx.2_5end |
EntrezGene: | SPTBN1 |
HGNC: | 11275 |
UniProt: | Q01082 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.06e-26 | 253 |
embryonic cell | 6.83e-13 | 250 |
squamous epithelial cell | 1.24e-10 | 63 |
endodermal cell | 2.38e-10 | 58 |
endo-epithelial cell | 4.27e-09 | 42 |
mesothelial cell | 6.18e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.40e-14 | 160 |
endoderm | 2.40e-14 | 160 |
presumptive endoderm | 2.40e-14 | 160 |
digestive system | 2.05e-12 | 145 |
digestive tract | 2.05e-12 | 145 |
primitive gut | 2.05e-12 | 145 |
subdivision of digestive tract | 6.54e-11 | 118 |
epithelial tube | 6.45e-09 | 117 |
primordium | 3.61e-08 | 160 |
foregut | 7.14e-08 | 87 |
endo-epithelium | 9.02e-08 | 82 |
splanchnic layer of lateral plate mesoderm | 1.71e-07 | 83 |
exocrine gland | 3.17e-07 | 31 |
exocrine system | 3.17e-07 | 31 |
subdivision of head | 8.58e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.99e-08 | 106 |
cell type cancer | 6.60e-08 | 143 |