FFCP PHASE1:Hg19::chr8:25281776..25281779,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2796 | |EntrezGene=2796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4419 | |HGNC=4419 | ||
|TSSclassifier=strong | |||
|UniProt=P01148 | |UniProt=P01148 | ||
|association_with_transcript=-29bp_to_ENST00000421054_5end | |association_with_transcript=-29bp_to_ENST00000421054_5end | ||
|cluster_id=chr8:25281776..25281779,- | |||
|coexpression_cluster_id=C35 | |coexpression_cluster_id=C35 | ||
|description=CAGE_peak_1_at_GNRH1_5end | |description=CAGE_peak_1_at_GNRH1_5end | ||
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|ontology_enrichment_celltype=CL:0002097!7.52e-08!2 | |ontology_enrichment_celltype=CL:0002097!7.52e-08!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;6.30e-26;2 | |ontology_enrichment_development_v019=UBERON:0010122;6.30e-26;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009663!7.90e-69!7;UBERON:0000369!5.37e-54!4;UBERON:0002435!5.37e-54!4;UBERON:0000204!5.37e-54!4;UBERON:0010082!5.37e-54!4;UBERON:0002308!1.56e-53!9;UBERON:0002420!1.56e-53!9;UBERON:0000125!1.56e-53!9;UBERON:0007245!1.56e-53!9;UBERON:0010009!1.56e-53!9;UBERON:0010011!1.56e-53!9;UBERON:0000454!1.56e-53!9;UBERON:0002780!4.38e-44!41;UBERON:0001890!4.38e-44!41;UBERON:0006240!4.38e-44!41;UBERON:0003080!4.94e-43!42;UBERON:0005383!4.42e-41!3;UBERON:0005382!4.42e-41!3;UBERON:0001049!1.33e-31!57;UBERON:0005068!1.33e-31!57;UBERON:0006241!1.33e-31!57;UBERON:0007135!1.33e-31!57;UBERON:0002791!8.78e-31!33;UBERON:0002616!1.65e-30!59;UBERON:0001893!7.01e-30!34;UBERON:0003056!1.74e-29!61;UBERON:0003075!2.20e-28!86;UBERON:0007284!2.20e-28!86;UBERON:0001875!4.13e-28!2;UBERON:0006514!4.13e-28!2;UBERON:0001873!6.20e-28!2;UBERON:0010122!6.20e-28!2;UBERON:0002346!4.47e-27!90;UBERON:0000955!1.37e-25!69;UBERON:0006238!1.37e-25!69;UBERON:0001017!2.74e-25!82;UBERON:0001869!3.19e-25!32;UBERON:0005743!4.45e-24!86;UBERON:0002020!9.60e-24!34;UBERON:0003528!9.60e-24!34;UBERON:0000073!1.02e-21!94;UBERON:0001016!1.02e-21!94;UBERON:0001894!1.39e-17!7;UBERON:0006222!1.39e-17!7;UBERON:0007023!2.66e-15!115;UBERON:0001874!5.42e-15!1;UBERON:0001882!9.36e-15!1;UBERON:0005403!9.36e-15!1;UBERON:0002022!2.41e-14!1;UBERON:0002336!3.15e-14!1;UBERON:0001018!3.15e-14!1;UBERON:0002473!3.15e-14!1;UBERON:0005340!3.15e-14!1;UBERON:0002316!3.15e-14!1;UBERON:0003544!3.15e-14!1;UBERON:0001020!3.15e-14!1;UBERON:0005970!3.15e-14!1;UBERON:0002437!3.15e-14!1;UBERON:0000033!5.82e-14!123;UBERON:0004121!1.24e-13!169;UBERON:0000924!2.75e-13!173;UBERON:0006601!2.75e-13!173;UBERON:0000153!2.94e-13!129;UBERON:0007811!2.94e-13!129;UBERON:0000025!2.00e-08!194;UBERON:0002360!5.74e-08!2;UBERON:0000094!5.74e-08!2;UBERON:0007645!5.74e-08!2;UBERON:0001905!6.58e-08!2;UBERON:0002757!6.58e-08!2;UBERON:0010134!6.58e-08!2;UBERON:0002784!6.58e-08!2;UBERON:0005408!6.58e-08!2;UBERON:0001899!6.58e-08!2;UBERON:0001897!7.03e-08!2;UBERON:0005162!9.19e-08!2;UBERON:0000122!9.19e-08!2;UBERON:0000483!8.11e-07!309;UBERON:0000119!9.80e-07!312 | |ontology_enrichment_uberon=UBERON:0009663!7.90e-69!7;UBERON:0000369!5.37e-54!4;UBERON:0002435!5.37e-54!4;UBERON:0000204!5.37e-54!4;UBERON:0010082!5.37e-54!4;UBERON:0002308!1.56e-53!9;UBERON:0002420!1.56e-53!9;UBERON:0000125!1.56e-53!9;UBERON:0007245!1.56e-53!9;UBERON:0010009!1.56e-53!9;UBERON:0010011!1.56e-53!9;UBERON:0000454!1.56e-53!9;UBERON:0002780!4.38e-44!41;UBERON:0001890!4.38e-44!41;UBERON:0006240!4.38e-44!41;UBERON:0003080!4.94e-43!42;UBERON:0005383!4.42e-41!3;UBERON:0005382!4.42e-41!3;UBERON:0001049!1.33e-31!57;UBERON:0005068!1.33e-31!57;UBERON:0006241!1.33e-31!57;UBERON:0007135!1.33e-31!57;UBERON:0002791!8.78e-31!33;UBERON:0002616!1.65e-30!59;UBERON:0001893!7.01e-30!34;UBERON:0003056!1.74e-29!61;UBERON:0003075!2.20e-28!86;UBERON:0007284!2.20e-28!86;UBERON:0001875!4.13e-28!2;UBERON:0006514!4.13e-28!2;UBERON:0001873!6.20e-28!2;UBERON:0010122!6.20e-28!2;UBERON:0002346!4.47e-27!90;UBERON:0000955!1.37e-25!69;UBERON:0006238!1.37e-25!69;UBERON:0001017!2.74e-25!82;UBERON:0001869!3.19e-25!32;UBERON:0005743!4.45e-24!86;UBERON:0002020!9.60e-24!34;UBERON:0003528!9.60e-24!34;UBERON:0000073!1.02e-21!94;UBERON:0001016!1.02e-21!94;UBERON:0001894!1.39e-17!7;UBERON:0006222!1.39e-17!7;UBERON:0007023!2.66e-15!115;UBERON:0001874!5.42e-15!1;UBERON:0001882!9.36e-15!1;UBERON:0005403!9.36e-15!1;UBERON:0002022!2.41e-14!1;UBERON:0002336!3.15e-14!1;UBERON:0001018!3.15e-14!1;UBERON:0002473!3.15e-14!1;UBERON:0005340!3.15e-14!1;UBERON:0002316!3.15e-14!1;UBERON:0003544!3.15e-14!1;UBERON:0001020!3.15e-14!1;UBERON:0005970!3.15e-14!1;UBERON:0002437!3.15e-14!1;UBERON:0000033!5.82e-14!123;UBERON:0004121!1.24e-13!169;UBERON:0000924!2.75e-13!173;UBERON:0006601!2.75e-13!173;UBERON:0000153!2.94e-13!129;UBERON:0007811!2.94e-13!129;UBERON:0000025!2.00e-08!194;UBERON:0002360!5.74e-08!2;UBERON:0000094!5.74e-08!2;UBERON:0007645!5.74e-08!2;UBERON:0001905!6.58e-08!2;UBERON:0002757!6.58e-08!2;UBERON:0010134!6.58e-08!2;UBERON:0002784!6.58e-08!2;UBERON:0005408!6.58e-08!2;UBERON:0001899!6.58e-08!2;UBERON:0001897!7.03e-08!2;UBERON:0005162!9.19e-08!2;UBERON:0000122!9.19e-08!2;UBERON:0000483!8.11e-07!309;UBERON:0000119!9.80e-07!312 | ||
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|short_description=p1@GNRH1 | |short_description=p1@GNRH1 | ||
}} | }} |
Latest revision as of 16:37, 17 September 2015
Short description: | p1@GNRH1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNRH1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -29bp_to_ENST00000421054_5end |
EntrezGene: | GNRH1 |
HGNC: | 4419 |
UniProt: | P01148 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data