FFCP PHASE1:Hg19::chr19:38085739..38085762,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163255 | |EntrezGene=163255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25331 | |HGNC=25331 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NDQ6 | |UniProt=Q8NDQ6 | ||
|association_with_transcript=8bp_to_ENST00000316433,ENST00000343599,NM_001172225,NM_001172226_5end | |association_with_transcript=8bp_to_ENST00000316433,ENST00000343599,NM_001172225,NM_001172226_5end | ||
|cluster_id=chr19:38085739..38085762,+ | |||
|coexpression_cluster_id=C652 | |||
|description=CAGE_peak_3_at_ZNF540_5end | |description=CAGE_peak_3_at_ZNF540_5end | ||
|id=chr19:38085739..38085762,+ | |id=chr19:38085739..38085762,+ | ||
|ontology_enrichment_celltype=CL:0000791!7.17e-13!18;CL:0000789!7.17e-13!18;CL:0002420!7.17e-13!18;CL:0002419!7.17e-13!18;CL:0000790!7.17e-13!18;CL:0000838!7.77e-12!52;CL:0000542!2.30e-11!53;CL:0000051!2.30e-11!53;CL:0000084!2.72e-10!25;CL:0000827!2.72e-10!25;CL:0000625!2.29e-09!11 | |ontology_enrichment_celltype=CL:0000791!7.17e-13!18;CL:0000789!7.17e-13!18;CL:0002420!7.17e-13!18;CL:0002419!7.17e-13!18;CL:0000790!7.17e-13!18;CL:0000838!7.77e-12!52;CL:0000542!2.30e-11!53;CL:0000051!2.30e-11!53;CL:0000084!2.72e-10!25;CL:0000827!2.72e-10!25;CL:0000625!2.29e-09!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;6.36e-22;18!CL:0000789;6.36e-22;18!CL:0002419;6.36e-22;18!CL:0000084;1.30e-14;25!CL:0000625;2.55e-13;11!CL:0000624;4.28e-12;6!CL:0000226;7.80e-07;3!CL:0000842;7.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.01e-22,18;CL:0000789,6.01e-22,18;CL:0002420,6.01e-22,18;CL:0002419,6.01e-22,18;CL:0000790,6.01e-22,18;CL:0000084,1.25e-14,25;CL:0000827,1.25e-14,25;CL:0000625,2.66e-13,11;CL:0000624,3.78e-12,6;CL:0000838,6.82e-10,52;CL:0000542,1.31e-09,53;CL:0000051,1.31e-09,53;CL:0000226,6.48e-07,3;CL:0000842,6.48e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;6.36e-22;18!UBERON:0006601;8.59e-14;82!UBERON:0006215;7.29e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-54!115;UBERON:0001049!3.07e-30!57;UBERON:0005068!3.07e-30!57;UBERON:0006241!3.07e-30!57;UBERON:0007135!3.07e-30!57;UBERON:0002780!1.88e-25!41;UBERON:0001890!1.88e-25!41;UBERON:0006240!1.88e-25!41;UBERON:0002616!3.06e-25!59;UBERON:0003080!1.92e-24!42;UBERON:0000955!1.13e-21!69;UBERON:0006238!1.13e-21!69;UBERON:0001893!1.58e-21!34;UBERON:0002020!2.39e-21!34;UBERON:0003528!2.39e-21!34;UBERON:0001017!7.79e-21!82;UBERON:0002791!1.08e-20!33;UBERON:0001869!4.35e-20!32;UBERON:0005743!6.55e-20!86;UBERON:0003075!3.12e-19!86;UBERON:0007284!3.12e-19!86;UBERON:0002619!4.19e-18!22;UBERON:0002346!4.88e-18!90;UBERON:0000073!1.56e-17!94;UBERON:0001016!1.56e-17!94;UBERON:0001950!1.53e-16!20;UBERON:0000956!8.06e-15!25;UBERON:0000203!8.06e-15!25;UBERON:0003056!1.26e-13!61;UBERON:0000153!7.17e-11!129;UBERON:0007811!7.17e-11!129;UBERON:0000033!1.55e-09!123;UBERON:0002420!1.94e-08!9;UBERON:0007245!1.94e-08!9;UBERON:0010009!1.94e-08!9;UBERON:0010011!1.94e-08!9;UBERON:0000454!1.94e-08!9;UBERON:0002308!4.08e-08!9;UBERON:0000125!4.08e-08!9;UBERON:0003076!4.56e-07!15;UBERON:0003057!4.56e-07!15;UBERON:0004121!5.27e-07!169;UBERON:0009663!6.77e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.18e-42;41!UBERON:0001890;4.18e-42;41!UBERON:0001893;2.17e-41;34!UBERON:0002791;1.39e-40;32!UBERON:0001869;1.39e-40;32!UBERON:0002619;4.66e-39;22!UBERON:0003528;1.75e-38;34!UBERON:0002020;1.75e-38;34!UBERON:0000073;3.92e-38;53!UBERON:0002616;3.92e-38;53!UBERON:0001950;2.09e-35;20!UBERON:0000956;9.85e-34;25!UBERON:0000203;9.85e-34;25!UBERON:0000955;3.05e-24;68!UBERON:0001017;2.83e-23;75!UBERON:0001016;2.34e-20;83!UBERON:0002420;1.05e-16;9!UBERON:0007245;1.05e-16;9!UBERON:0010009;1.05e-16;9!UBERON:0010011;1.05e-16;9!UBERON:0000454;1.05e-16;9!UBERON:0009663;2.48e-13;7!UBERON:0000125;6.53e-13;9!UBERON:0002308;6.53e-13;9!UBERON:0000200;2.03e-12;6!UBERON:0007023;2.37e-12;114!UBERON:0004732;3.30e-11;13!UBERON:0002021;9.01e-11;5!UBERON:0001894;1.21e-10;7!UBERON:0001872;1.46e-10;5!UBERON:0000349;2.43e-10;5!UBERON:0001871;2.62e-10;6!UBERON:0003296;1.62e-09;4!UBERON:0010133;1.62e-09;4!UBERON:0004733;1.66e-09;12!UBERON:0002028;1.66e-09;12!UBERON:0000369;2.39e-08;4!UBERON:0002435;2.39e-08;4!UBERON:0000204;2.39e-08;4!UBERON:0002298;2.07e-07;6!UBERON:0001870;5.65e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.34e-71,56;UBERON:0005068,6.34e-71,56;UBERON:0006241,6.34e-71,56;UBERON:0007135,6.34e-71,56;UBERON:0000073,1.49e-66,53;UBERON:0002616,1.49e-66,53;UBERON:0002780,8.30e-59,41;UBERON:0001890,8.30e-59,41;UBERON:0003080,8.30e-59,41;UBERON:0006240,8.30e-59,41;UBERON:0000955,4.39e-53,68;UBERON:0006238,4.39e-53,68;UBERON:0003075,1.00e-50,82;UBERON:0007284,1.00e-50,82;UBERON:0001017,1.44e-50,81;UBERON:0001893,3.26e-49,34;UBERON:0002346,1.14e-47,86;UBERON:0001016,2.27e-46,89;UBERON:0001869,5.97e-46,32;UBERON:0002791,6.18e-46,32;UBERON:0003528,6.73e-46,34;UBERON:0002020,6.73e-46,34;UBERON:0003056,1.03e-40,61;UBERON:0002619,2.40e-39,22;UBERON:0007023,1.72e-38,114;UBERON:0010371,7.85e-37,104;UBERON:0001950,7.78e-36,20;UBERON:0000956,5.50e-34,25;UBERON:0000203,5.50e-34,25;UBERON:0010314,9.75e-30,132;UBERON:0004121,2.83e-19,171;UBERON:0000924,2.83e-19,171;UBERON:0006601,2.83e-19,171;UBERON:0002420,6.93e-17,9;UBERON:0007245,6.93e-17,9;UBERON:0010009,6.93e-17,9;UBERON:0010011,6.93e-17,9;UBERON:0000454,6.93e-17,9;UBERON:0009663,1.84e-13,7;UBERON:0003076,2.48e-13,15;UBERON:0003057,2.48e-13,15;UBERON:0000125,3.70e-13,9;UBERON:0002308,3.70e-13,9;UBERON:0000025,1.55e-12,192;UBERON:0000200,1.84e-12,6;UBERON:0011216,3.95e-12,223;UBERON:0004732,2.89e-11,13;UBERON:0001872,7.90e-11,5;UBERON:0002021,8.22e-11,5;UBERON:0001894,9.69e-11,7;UBERON:0006222,9.69e-11,7;UBERON:0001871,2.59e-10,6;UBERON:0000349,2.90e-10,5;UBERON:0003296,1.32e-09,4;UBERON:0010133,1.32e-09,4;UBERON:0004733,1.44e-09,12;UBERON:0002028,1.44e-09,12;UBERON:0007277,1.44e-09,12;UBERON:0000369,1.49e-08,4;UBERON:0002435,1.49e-08,4;UBERON:0000204,1.49e-08,4;UBERON:0010082,1.49e-08,4;UBERON:0004111,4.45e-08,240;UBERON:0002298,1.67e-07,6;UBERON:0001870,4.15e-07,3;UBERON:0005383,7.92e-07,3;UBERON:0005382,7.92e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.236132343941038,0,1.15148819429164,0,0.919421224478927,0,0,0,0.142169232487422,0,0,0.601633342410425,0.434021741431704,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0.285012743741249,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0.954053754535364,2.84606484554724,0.587237189370939,1.14681968437569,0,0.560508562981536,0,6.68813218387032,4.71612915298998,1.43921049299656,1.33749196312542,3.58514493296949,7.57516489175573,1.94826728407911,0,2.06224135232386,1.55073726208535,2.16643091012012,0.25618263945135,0.130059347559878,0.164437904603676,0,2.02862160014537,4.44859689486181,6.68852070224283,3.1360657141493,0.226618685395132,1.91610246800961,1.71813722741315,5.81945291644857,0.95569624297229,2.60433381542567,1.90090408889675,2.25862678616659,2.30375900077953,1.24930726552346,2.13099526839615,0.821127996921047,3.62892137804518,2.40696176205157,3.33096128930438,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.72038491523742,0,0,0,0.174129737299267,0.26591592103773,2.14641561874808,0,1.48583000531826,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0.201504196455281,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,1.97065295158377,0.704387472105808,1.86595303986695,1.44119953416961,1.76739406796932,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.50939302401662,2.56686072559497,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,3.51505644408909,3.01999881146064,1.921096040462,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.438519753291869,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0,0,0.714695326373367,0.822724546172388,1.29694662238543,1.08006287447623,0.79312517629427,0,0,0,0,0.432807638929335,0.284567373393656,0.637705090915289,0,0.383010740264733,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0.586032717087576,0,0.334330152832435,0,0.47748896947538,0,0,4.97073823883149,1.54736358051564,0,0,0,0.19924798825107,0.828851746593443,0.503865495708552,0,0,0,0,0,0,0.295930216910801,0,0,0.969332746095218,2.87581104301739,1.99613798001194,0,0.349839999984783,0,0,0.254253650292766,0,0.344743373241465,0,0.347249989866585,2.65722415744152,1.80894657938112,9.15490417902499,4.09143261745531,6.50204761697804,1.53569778007781,0.10893846351899,0.139423744278603,0.769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,0.216388639742091,0,0.442287822516696,0,0,0.247127877893006,0.104421949505455,1.21322039365219,0,1.87411556580271,0,0,0,1.18375320854817,0,2.14250933141343,0.821425535170343,0,0.311064574191741,0,0,0,0,0,0.277349346026277,0,0,0,0.34945333648406,0.171986032471617,0,0.0730893170861856,0.0821154570532092,0.387956065953678,0.0882561266915003,0.451961481561065,0,0,3.92526934926448,0.391102765469606,0,0.426905989478705,0.19980960958213,0.144090417154106,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,2.40168115483916,1.36905378891993,1.27746588066972,0,0,1.67569440763353,0.916641696046735,0.717873024576814,0.599037001496973,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,3.18091875923721,2.04305109167363,0,0,0,0.674921674654501,0,3.52347428616543,0,0.315222829196793,0.577000469484979,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,1.93924434542326,0.92562821219883,0,0,0.213574825135389,0.628817220398664,0.828478110694391,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0.157054096250234,5.31640907980192,5.73523445039227,1.752673029891,1.14681839138014,1.88579387612649,1.36612086471044,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0.233713309847224,0,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0.734210113519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| ||
|short_description=p3@ZNF540 | |short_description=p3@ZNF540 | ||
}} | }} |
Latest revision as of 18:15, 17 September 2015
Short description: | p3@ZNF540 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF540_5end |
Coexpression cluster: | C652_cerebellum_occipital_pineal_pituitary_medial_parietal_amygdala |
Association with transcript: | 8bp_to_ENST00000316433, ENST00000343599, NM_001172225, NM_001172226_5end |
EntrezGene: | ZNF540 |
HGNC: | 25331 |
UniProt: | Q8NDQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.01e-22 | 18 |
alpha-beta T cell | 6.01e-22 | 18 |
immature T cell | 6.01e-22 | 18 |
mature T cell | 6.01e-22 | 18 |
immature alpha-beta T cell | 6.01e-22 | 18 |
T cell | 1.25e-14 | 25 |
pro-T cell | 1.25e-14 | 25 |
CD8-positive, alpha-beta T cell | 2.66e-13 | 11 |
CD4-positive, alpha-beta T cell | 3.78e-12 | 6 |
lymphoid lineage restricted progenitor cell | 6.82e-10 | 52 |
lymphocyte | 1.31e-09 | 53 |
common lymphoid progenitor | 1.31e-09 | 53 |
single nucleate cell | 6.48e-07 | 3 |
mononuclear cell | 6.48e-07 | 3 |