FFCP PHASE1:Hg19::chr7:22396692..22396725,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9771 | |EntrezGene=9771 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16862 | |HGNC=16862 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGY3 | |UniProt=E9PGY3 | ||
|association_with_transcript=37bp_to_ENST00000405243_5end | |association_with_transcript=37bp_to_ENST00000405243_5end | ||
|cluster_id=chr7:22396692..22396725,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_RAPGEF5_5end | |description=CAGE_peak_6_at_RAPGEF5_5end | ||
|id=chr7:22396692..22396725,- | |id=chr7:22396692..22396725,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.46e-11;82 | |||
|ontology_enrichment_disease=DOID:305!7.62e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-43!115;UBERON:0001049!1.27e-27!57;UBERON:0005068!1.27e-27!57;UBERON:0006241!1.27e-27!57;UBERON:0007135!1.27e-27!57;UBERON:0003080!3.19e-26!42;UBERON:0000955!9.76e-26!69;UBERON:0006238!9.76e-26!69;UBERON:0002780!1.66e-25!41;UBERON:0001890!1.66e-25!41;UBERON:0006240!1.66e-25!41;UBERON:0002616!2.78e-24!59;UBERON:0001017!8.68e-24!82;UBERON:0001869!9.21e-24!32;UBERON:0001893!8.19e-23!34;UBERON:0005743!2.00e-22!86;UBERON:0002020!2.80e-22!34;UBERON:0003528!2.80e-22!34;UBERON:0002791!6.42e-22!33;UBERON:0000073!1.78e-21!94;UBERON:0001016!1.78e-21!94;UBERON:0002619!9.12e-21!22;UBERON:0001950!3.55e-19!20;UBERON:0003075!6.23e-19!86;UBERON:0007284!6.23e-19!86;UBERON:0000956!4.89e-18!25;UBERON:0000203!4.89e-18!25;UBERON:0002346!9.92e-18!90;UBERON:0000153!5.30e-17!129;UBERON:0007811!5.30e-17!129;UBERON:0003056!7.07e-17!61;UBERON:0004111!2.44e-16!241;UBERON:0000033!6.01e-16!123;UBERON:0004121!1.78e-13!169;UBERON:0000477!4.57e-13!286;UBERON:0000924!6.19e-13!173;UBERON:0006601!6.19e-13!173;UBERON:0000025!9.76e-13!194;UBERON:0000064!1.47e-08!219;UBERON:0000483!1.72e-08!309;UBERON:0000119!4.30e-08!312;UBERON:0001871!7.78e-08!7;UBERON:0000481!2.98e-07!347;UBERON:0000200!8.02e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.14e-35;32!UBERON:0002619;4.20e-34;22!UBERON:0002791;1.99e-32;32!UBERON:0001950;2.07e-31;20!UBERON:0001893;6.60e-31;34!UBERON:0003528;9.04e-31;34!UBERON:0002020;9.04e-31;34!UBERON:0000956;3.60e-29;25!UBERON:0000203;3.60e-29;25!UBERON:0002780;1.42e-28;41!UBERON:0001890;1.42e-28;41!UBERON:0000073;7.16e-21;53!UBERON:0002616;7.16e-21;53!UBERON:0000955;9.07e-19;68!UBERON:0001017;6.81e-16;75!UBERON:0001016;3.34e-15;83!UBERON:0007023;1.12e-11;114!UBERON:0001871;1.07e-10;6!UBERON:0002420;1.13e-10;9!UBERON:0007245;1.13e-10;9!UBERON:0010009;1.13e-10;9!UBERON:0010011;1.13e-10;9!UBERON:0000454;1.13e-10;9!UBERON:0000200;1.76e-10;6!UBERON:0002021;3.99e-09;5!UBERON:0001872;6.71e-09;5!UBERON:0000349;1.94e-08;5!UBERON:0009663;4.45e-08;7!UBERON:0000125;9.47e-08;9!UBERON:0002308;9.47e-08;9!UBERON:0011216;1.16e-07;132!UBERON:0000369;1.59e-07;4!UBERON:0002435;1.59e-07;4!UBERON:0000204;1.59e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.03e-39,53;UBERON:0002616,2.03e-39,53;UBERON:0007023,2.19e-39,114;UBERON:0002780,2.85e-39,41;UBERON:0001890,2.85e-39,41;UBERON:0003080,2.85e-39,41;UBERON:0006240,2.85e-39,41;UBERON:0001869,5.86e-39,32;UBERON:0000955,7.35e-39,68;UBERON:0006238,7.35e-39,68;UBERON:0001049,2.35e-38,56;UBERON:0005068,2.35e-38,56;UBERON:0006241,2.35e-38,56;UBERON:0007135,2.35e-38,56;UBERON:0001893,4.45e-36,34;UBERON:0002791,6.01e-36,32;UBERON:0003528,1.59e-35,34;UBERON:0002020,1.59e-35,34;UBERON:0001017,1.22e-34,81;UBERON:0002619,3.70e-34,22;UBERON:0001016,1.00e-33,89;UBERON:0001950,1.89e-31,20;UBERON:0000956,3.22e-29,25;UBERON:0000203,3.22e-29,25;UBERON:0011216,5.18e-28,223;UBERON:0003056,2.34e-25,61;UBERON:0003075,3.49e-24,82;UBERON:0007284,3.49e-24,82;UBERON:0002346,2.14e-22,86;UBERON:0010371,4.13e-18,104;UBERON:0010314,5.15e-15,132;UBERON:0004121,1.38e-14,171;UBERON:0000924,1.38e-14,171;UBERON:0006601,1.38e-14,171;UBERON:0000025,3.90e-12,192;UBERON:0004111,6.08e-12,240;UBERON:0002420,9.53e-11,9;UBERON:0007245,9.53e-11,9;UBERON:0010009,9.53e-11,9;UBERON:0010011,9.53e-11,9;UBERON:0000454,9.53e-11,9;UBERON:0001871,9.76e-11,6;UBERON:0000200,1.74e-10,6;UBERON:0002021,4.00e-09,5;UBERON:0001872,6.72e-09,5;UBERON:0000349,1.94e-08,5;UBERON:0009663,3.70e-08,7;UBERON:0000125,6.65e-08,9;UBERON:0002308,6.65e-08,9;UBERON:0000369,1.52e-07,4;UBERON:0002435,1.52e-07,4;UBERON:0000204,1.52e-07,4;UBERON:0010082,1.52e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.305653622991805,0.328402357799783,0.314843125254717,0.393364276848904,0,0,0,0,0,9.21859686905589,2.70121541726101,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0,0.853460445133014,0.400395987036012,0,0,0.954053754535364,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665188192387692,0,4.1913304159268,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0.56530794192401,0,0,0.208994966536811,2.84258435086262,3.5576626268671,4.68608857870538,0.805658634218294,0.760272105718513,1.22031028774085,0.367663080345869,0,1.16089646769304,1.34717623575702,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.286804595389004,0.487894824518382,0,0.348581828608555,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0.982827216677626,2.36315962672562,6.18048339180511,0.737930631258681,0.171567810298526,0.219500570817251,0,0.301586917234893,0.277765335475589,0,0,0,0,0,0.577465791044295,0.462985512576611,0.380508304469197,0,0.858486162094873,0,0,0,0,0.335964256397719,0,0.358234090811393,0,0,0,0.352193736052904,2.48793738648926,3.02651902175619,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0,2.57602529119306,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,1.48642540100575,2.01976898167023,4.48193613095009,0.637705090915289,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,12.1601788795672,0,0,0.568272293612826,0,0,0,6.95903353436409,7.31480965334666,0,0,0.211125408127993,0.796991953004279,3.86797481743607,4.28285671352269,0,0.615424027305347,0,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,20.3559876679996,16.234417178324,1.99613798001194,0.520855522170466,2.0115799999125,3.62499787717397,2.38966241399549,0.508507300585533,0,1.37897349296586,0,0.694499979733169,7.97167247232455,20.1396052504431,4.5774520895125,6.19243855614858,7.38869047383869,15.3569778007781,0,1.25481369850743,0.615602068030377,0,0,0,0,0,0,0,0,0,0.831058409500782,0,0,0,0,0.317873157960757,1.26598838716816,0.979396848954886,0.282706142867882,0.432777279484182,0.995261931078505,1.85760885457012,3.05515072466813,0,0.247127877893006,0.730953646538188,0.539209063845416,4.81546588379273,2.81117334870407,7.84555593627364,0.782658475728359,0,0.394584402849391,2.41981432097328,2.75465485467441,1.0741718536843,0.150323419414493,0.72581733978073,0,0.330991955875499,0,0,1.13843818411917,0,0.867798691675654,1.37189356380129,0.609414446062818,0.34945333648406,0,0,0,0,1.26085721434945,0,0.90392296312213,0.137041924646751,0.596143835108969,20.0062115220577,0.977756913674015,1.36269994427607,2.98834192635094,0.19980960958213,0.288180834308212,0,2.4023299700675,0.288109595976299,0.372757606696298,0.471388069233591,2.17446729717782,1.04602846312333,0,0,7.80546375322726,1.64286454670392,0,0,0.262887354279314,0.558564802544508,0.458320848023367,0.717873024576814,0.798716001995964,0.429226048136571,0.89268582976749,1.47803639470798,0,0,1.10296455230113,0.824158583811665,0.741438982396034,0.688992370603241,0.254019996197353,7.95229689809303,6.40156008724405,0,0.412618309791701,0.415440338029185,0,0,16.6453785242988,0.670869375198532,0.0788057072991982,1.36381929150995,0,0,1.34340638123612,2.1440859791201,1.98627591109629,0,0,0,0,0,1.06720276974141,0,0.113312091520126,1.31897010310274,2.65013777824443,1.80996138906171,0.26446520348538,0,2.81926008926669,4.0579216775724,5.50215067848831,7.87054205159671,0.496166021811951,0,10.2305782639953,0.638341257770182,2.1760712134779,3.0082787282724,1.53172788381731,0.655745261419609,0,14.1770908794718,16.473545761765,15.774057269019,0,0.443716206147409,1.24192805882767,0,1.49976489554528,0,0.856396000634902,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0,0,0,11.8902255090488,0,0,0,0,0,0.422624246717254,0.19998739585493,0.426766918776564,0,0,0,0.279759015438889,0.622077260032973,1.27894371303652,4.20516764447059,0,0.109209638192014,0,0,0,0,0,1.89268188003008,4.00285374142735,0,0,17.34189077604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|short_description=p6@RAPGEF5 | |short_description=p6@RAPGEF5 | ||
}} | }} |
Latest revision as of 18:49, 17 September 2015
Short description: | p6@RAPGEF5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RAPGEF5_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 37bp_to_ENST00000405243_5end |
EntrezGene: | RAPGEF5 |
HGNC: | 16862 |
UniProt: | E9PGY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data