FFCP PHASE1:Hg19::chr7:22396727..22396787,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:22396727..22396787,-
|short_description=p2@RAPGEF5
|description=CAGE_peak_2_at_RAPGEF5_5end
|association_with_transcript=0bp_to_ENST00000405243_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9771 | |EntrezGene=9771 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16862 | |HGNC=16862 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGY3 | |UniProt=E9PGY3 | ||
|association_with_transcript=0bp_to_ENST00000405243_5end | |||
|cluster_id=chr7:22396727..22396787,- | |||
|coexpression_cluster_id=C4674 | |||
|description=CAGE_peak_2_at_RAPGEF5_5end | |||
|id=chr7:22396727..22396787,- | |||
|ontology_enrichment_celltype=CL:0000066!1.73e-10!254;CL:0000223!3.74e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.30e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.08e-07,24;CL:0000826,4.08e-07,24;CL:0000066,5.18e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.67e-10;82!UBERON:0001041;5.53e-07;30 | |||
|ontology_enrichment_disease=DOID:305!3.08e-12!106;DOID:0050687!4.79e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.75e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.63e-14,106;DOID:0050687,7.71e-09,143;DOID:1749,8.40e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.48e-29!115;UBERON:0003080!2.29e-21!42;UBERON:0001049!4.10e-21!57;UBERON:0005068!4.10e-21!57;UBERON:0006241!4.10e-21!57;UBERON:0007135!4.10e-21!57;UBERON:0002780!7.05e-21!41;UBERON:0001890!7.05e-21!41;UBERON:0006240!7.05e-21!41;UBERON:0000955!1.58e-20!69;UBERON:0006238!1.58e-20!69;UBERON:0001017!1.86e-19!82;UBERON:0001869!4.14e-19!32;UBERON:0002616!6.10e-19!59;UBERON:0005743!8.78e-19!86;UBERON:0001893!1.87e-18!34;UBERON:0000073!6.18e-18!94;UBERON:0001016!6.18e-18!94;UBERON:0002020!7.02e-18!34;UBERON:0003528!7.02e-18!34;UBERON:0002791!8.80e-18!33;UBERON:0000153!2.27e-16!129;UBERON:0007811!2.27e-16!129;UBERON:0002619!7.94e-16!22;UBERON:0000033!1.08e-15!123;UBERON:0003056!1.24e-15!61;UBERON:0003075!1.59e-15!86;UBERON:0007284!1.59e-15!86;UBERON:0000956!7.16e-15!25;UBERON:0000203!7.16e-15!25;UBERON:0001950!8.06e-15!20;UBERON:0002346!2.64e-14!90;UBERON:0004111!3.30e-14!241;UBERON:0004121!7.96e-14!169;UBERON:0000924!4.01e-13!173;UBERON:0006601!4.01e-13!173;UBERON:0000025!3.92e-11!194;UBERON:0000477!4.77e-10!286;UBERON:0001007!3.82e-09!155;UBERON:0001555!3.82e-09!155;UBERON:0007026!3.82e-09!155;UBERON:0004921!5.22e-09!129;UBERON:0004185!5.22e-09!129;UBERON:0004119!5.89e-09!169;UBERON:0000925!5.89e-09!169;UBERON:0006595!5.89e-09!169;UBERON:0000064!7.60e-09!219;UBERON:0000481!4.70e-08!347;UBERON:0000483!1.03e-07!309;UBERON:0000119!1.81e-07!312;UBERON:0000475!9.48e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.96e-19;32!UBERON:0002619;2.51e-18;22!UBERON:0002791;2.86e-17;32!UBERON:0001950;3.86e-17;20!UBERON:0001893;4.45e-17;34!UBERON:0003528;1.01e-16;34!UBERON:0002020;1.01e-16;34!UBERON:0002780;3.30e-16;41!UBERON:0001890;3.30e-16;41!UBERON:0000956;8.30e-16;25!UBERON:0000203;8.30e-16;25!UBERON:0000073;4.10e-12;53!UBERON:0002616;4.10e-12;53!UBERON:0000955;3.36e-10;68!UBERON:0007023;5.09e-09;114!UBERON:0001017;8.28e-09;75!UBERON:0001016;2.42e-08;83!UBERON:0000922;9.73e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.17e-29,114;UBERON:0011216,1.17e-24,223;UBERON:0002780,2.04e-22,41;UBERON:0001890,2.04e-22,41;UBERON:0003080,2.04e-22,41;UBERON:0006240,2.04e-22,41;UBERON:0000073,7.42e-22,53;UBERON:0002616,7.42e-22,53;UBERON:0000955,1.10e-20,68;UBERON:0006238,1.10e-20,68;UBERON:0001869,1.10e-20,32;UBERON:0001049,1.52e-20,56;UBERON:0005068,1.52e-20,56;UBERON:0006241,1.52e-20,56;UBERON:0007135,1.52e-20,56;UBERON:0001893,1.54e-19,34;UBERON:0001017,2.30e-19,81;UBERON:0003528,6.73e-19,34;UBERON:0002020,6.73e-19,34;UBERON:0002791,7.73e-19,32;UBERON:0002619,2.73e-18,22;UBERON:0001016,3.31e-18,89;UBERON:0001950,4.15e-17,20;UBERON:0000956,9.50e-16,25;UBERON:0000203,9.50e-16,25;UBERON:0010371,4.18e-14,104;UBERON:0003056,4.23e-14,61;UBERON:0003075,1.39e-13,82;UBERON:0007284,1.39e-13,82;UBERON:0004121,8.28e-13,171;UBERON:0000924,8.28e-13,171;UBERON:0006601,8.28e-13,171;UBERON:0002346,9.98e-13,86;UBERON:0004111,1.49e-12,240;UBERON:0000025,3.86e-10,192;UBERON:0004921,1.14e-09,118;UBERON:0001007,2.22e-09,145;UBERON:0001555,2.22e-09,145;UBERON:0007026,2.22e-09,145;UBERON:0004119,3.83e-08,160;UBERON:0000925,3.83e-08,160;UBERON:0006595,3.83e-08,160;UBERON:0005911,5.85e-07,82 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,1.09220686065086,1.31883489114227,0,0,0,0,0,0,0.369363174230364,0.612002073732759,0,0.572471974262113,1.23186982565596,0.502170558379211,2.59805579543034,2.21671591514854,2.67616656466509,1.18009283054671,0,0,0.919421224478927,0.6024118375565,1.10926203050036,38.6561330895705,19.7615233157516,1.17440175733939,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,6.00752472388345,4.44754626931777,5.9742231159311,3.2031678962881,1.72425731986345,5.2883589822789,1.90810750907073,1.1384259382189,1.17447437874188,3.05818582500183,1.32171328579026,0.560508562981536,1.05353633910031,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.25618263945135,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.472674085820339,1.55210578223795,1.05401742831751,8.71010852059789,1.82147644146271,1.48313777113772,0,0,0,0,0,0,1.78886166630035,1.72046919021225,1.04142150482278,0.56530794192401,0.419499436209906,0.275118041940067,1.25396979922086,7.49408601591054,6.04802646567407,8.70273593188143,2.41697590265488,3.04108842287405,5.36936526605973,1.10298924103761,0.81014194788176,3.83988831621543,3.14341121676638,3.71617885594963,3.06633274931766,0.949265659568129,1.46561395144326,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0.490385709340376,0.151357427644931,0,0,0,0,0,0,0,0,0,0.491337269247072,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0.423863802319124,0.300091096084402,0.206105058476878,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,5.60456474173561,3.81844568827169,4.01526433544605,1.95157929807353,1.98794652482228,1.2781333715647,2.48786532036889,2.01856680700503,4.37972830890996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0.4115740113314,0,17.7457048750563,10.8110993834539,17.7236972004421,33.1097324560988,8.73217913656106,0.343135620597051,2.08525542276389,1.1240175325762,3.51851403440708,1.85176890317059,0,0,1.44331342025273,0.34779121492523,0.234817388471643,2.16549671641611,0.925971025153221,0.951270761172991,2.37061319387782,3.43394464837949,0,0,0,0.93733833986777,1.51183915378974,3.1190521393325,2.05984602216551,2.03443756959773,2.68367875415648,0,0.792435906119034,6.84182781284548,10.6648765528551,3.1560608356595,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0.128343036279748,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0,0.356857977594324,0,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0.413536052245775,0,0.320182673410333,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,5.07609688284813,0.601519410909855,2.94659164594868,0,0,0,0.902399225814824,1.00119938235739,0.784349769176855,0,0.844413031143006,1.13733384070897,2.04112446331819,1.0795795805107,3.08454505380579,0.541892875087706,0,1.78413391131527,0,0.671624264166535,0,0,0.512900250232778,0.656029291399411,0,11.2314702696017,0.732555718546747,0.907604499126468,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0,0,0.661139661443912,0.768760269460425,9.57095343709381,1.92199783625545,0.464845549297286,0,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.962221127255121,2.01090682660736,2.17781969722645,9.13194867534758,0,1.68471475667626,0,0.459446800413919,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0.320472213382419,0,7.10616626344992,11.1481905075431,16.1581518533618,49.0167300670573,4.78278818186467,1.1974762285969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2869783689836,14.9438342857332,0,0,4.2620422020962,0.23874448473769,0.890894042497916,0,27.8361341374563,24.1951396226082,1.22439575525196,0,3.80025734630388,1.79323189425963,24.0367006512098,31.7435262296388,0,4.55413780205957,0,2.42644548097782,4.11748701753901,0,0.887790650732402,0,0,27.1413168906661,22.2643435588443,13.9729658600836,2.3438498497671,22.3897599990261,11.5999932069567,18.0931582773944,1.5255219017566,3.78220290828698,13.4449915564171,2.33283690706603,4.5142498682656,36.3153968183674,56.3185368380655,33.5679819897583,21.3417971667264,15.9595714234916,30.2751848072482,0,14.6394931492533,3.61666214967846,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,4.48771541130422,0,0,0,0,1.11255605286265,14.7698645169619,8.97780444875312,4.52329828588611,4.760550074326,23.8862863458841,22.9989667708682,40.3279895656193,1.48260564340311,3.21266241260907,3.86361213170185,1.41542379259422,4.81546588379273,11.0104289490909,77.3608306274424,14.2835171820425,0.242780379534093,2.36750641709634,15.7287930863263,8.26396456402323,1.76922422959766,4.0587323241913,7.98399073758803,1.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| ||
|short_description=p2@RAPGEF5 | |||
}} | }} |
Latest revision as of 18:51, 17 September 2015
Short description: | p2@RAPGEF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAPGEF5_5end |
Coexpression cluster: | C4674_lymphoma_diffuse_small_smallcell_caudate_acute_signet |
Association with transcript: | 0bp_to_ENST00000405243_5end |
EntrezGene: | RAPGEF5 |
HGNC: | 16862 |
UniProt: | E9PGY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.08e-07 | 24 |
pro-B cell | 4.08e-07 | 24 |
epithelial cell | 5.18e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.63e-14 | 106 |
cell type cancer | 7.71e-09 | 143 |
squamous cell carcinoma | 8.40e-07 | 14 |