FFCP PHASE1:Hg19::chr19:38878505..38878522,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:38878505..38878522,-
|short_description=p4@GGN
|description=CAGE_peak_4_at_GGN_5end
|association_with_transcript=-41bp_to_AK093032,AX747869_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=199720 | |EntrezGene=199720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18869 | |HGNC=18869 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UU5 | |UniProt=Q86UU5 | ||
|association_with_transcript=-41bp_to_AK093032,AX747869_5end | |||
|cluster_id=chr19:38878505..38878522,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_GGN_5end | |||
|id=chr19:38878505..38878522,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;7.62e-26;1!CL:0000346;1.53e-09;3!CL:1000428;1.53e-09;3!CL:0002567;1.53e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,9.79e-26,1;CL:0000346,1.41e-09,3;CL:1000428,1.41e-09,3;CL:0002567,1.54e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.89e-11;10!UBERON:0005564;4.89e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004145!2.87e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;1.21e-13;2!UBERON:0002012;1.21e-13;2!UBERON:0008886;1.21e-13;2!UBERON:0000473;1.51e-13;8!UBERON:0003135;4.03e-10;11!UBERON:0000412;1.53e-09;3!UBERON:0001992;1.53e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,1.37e-13,2;UBERON:0007497,1.37e-13,2;UBERON:0003643,1.37e-13,2;UBERON:0003504,1.37e-13,2;UBERON:0003469,1.37e-13,2;UBERON:0003496,1.37e-13,2;UBERON:0002012,1.37e-13,2;UBERON:0008886,1.37e-13,2;UBERON:0007303,1.37e-13,2;UBERON:0002061,1.37e-13,2;UBERON:0005432,1.37e-13,2;UBERON:0004363,1.37e-13,2;UBERON:0000473,1.51e-13,8;UBERON:0003135,4.03e-10,11;UBERON:0000412,1.41e-09,3;UBERON:0001992,1.41e-09,3;UBERON:0004145,1.67e-09,3 | |||
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| ||
|short_description=p4@GGN | |||
}} | }} |
Latest revision as of 19:35, 17 September 2015
Short description: | p4@GGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GGN_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -41bp_to_AK093032, AX747869_5end |
EntrezGene: | GGN |
HGNC: | 18869 |
UniProt: | Q86UU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 9.79e-26 | 1 |
hair follicle dermal papilla cell | 1.41e-09 | 3 |
stem cell of epidermis | 1.41e-09 | 3 |
light melanocyte | 1.54e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 1.37e-13 | 2 |
developing epithelial placode | 1.37e-13 | 2 |
respiratory system arterial blood vessel | 1.37e-13 | 2 |
respiratory system blood vessel | 1.37e-13 | 2 |
respiratory system artery | 1.37e-13 | 2 |
head blood vessel | 1.37e-13 | 2 |
pulmonary artery | 1.37e-13 | 2 |
pulmonary vascular system | 1.37e-13 | 2 |
pharyngeal vasculature | 1.37e-13 | 2 |
truncus arteriosus | 1.37e-13 | 2 |
aortic sac | 1.37e-13 | 2 |
pharyngeal arch artery | 1.37e-13 | 2 |
testis | 1.51e-13 | 8 |
male reproductive organ | 4.03e-10 | 11 |
dermal papilla | 1.41e-09 | 3 |
papillary layer of dermis | 1.41e-09 | 3 |
outflow tract | 1.67e-09 | 3 |