FFCP PHASE1:Hg19::chr10:30024716..30024739,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6840 | |EntrezGene=6840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11480 | |HGNC=11480 | ||
|TSSclassifier=strong | |||
|UniProt=O95425,Q569J5 | |UniProt=O95425,Q569J5 | ||
|association_with_transcript=0bp_to_ENST00000375398,ENST00000375400,NM_003174,uc001iuu.1_5end | |association_with_transcript=0bp_to_ENST00000375398,ENST00000375400,NM_003174,uc001iuu.1_5end | ||
|cluster_id=chr10:30024716..30024739,- | |||
|description=CAGE_peak_6_at_SVIL_5end | |description=CAGE_peak_6_at_SVIL_5end | ||
|id=chr10:30024716..30024739,- | |id=chr10:30024716..30024739,- | ||
|ontology_enrichment_celltype=CL:0002057!2.23e-15!42;CL:0000860!8.51e-14!45 | |ontology_enrichment_celltype=CL:0002057!2.23e-15!42;CL:0000860!8.51e-14!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.30e-15;33!CL:0002057;1.30e-15;33!CL:0000473;4.27e-09;39!CL:0000234;4.27e-09;39!CL:0000576;2.17e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.83e-17,42;CL:0002057,5.83e-17,42;CL:0000473,1.65e-12,48;CL:0000234,1.65e-12,48;CL:0002009,3.91e-08,61;CL:0000766,5.63e-08,72;CL:0002194,2.40e-07,59;CL:0000576,2.40e-07,59;CL:0000040,2.40e-07,59;CL:0000559,2.40e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;2.57e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!8.18e-18!625;UBERON:0000480!1.79e-17!626;UBERON:0002050!5.25e-16!605;UBERON:0005423!5.25e-16!605;UBERON:0000923!1.07e-15!604;UBERON:0005291!1.07e-15!604;UBERON:0006598!1.07e-15!604;UBERON:0002532!1.07e-15!604;UBERON:0000922!1.16e-15!612;UBERON:0000468!1.17e-15!659;UBERON:0000926!4.79e-14!448;UBERON:0004120!4.79e-14!448;UBERON:0006603!4.79e-14!448;UBERON:0002049!1.13e-08!79;UBERON:0007798!1.13e-08!79;UBERON:0004535!4.39e-08!110;UBERON:0000062!4.57e-08!511;UBERON:0001009!6.51e-08!113;UBERON:0003081!7.41e-08!216;UBERON:0004119!1.24e-07!169;UBERON:0000925!1.24e-07!169;UBERON:0006595!1.24e-07!169;UBERON:0001981!5.11e-07!60;UBERON:0007500!5.11e-07!60;UBERON:0004537!5.11e-07!60;UBERON:0006965!5.11e-07!60;UBERON:0004573!5.59e-07!33;UBERON:0004571!5.59e-07!33;UBERON:0001637!5.79e-07!42;UBERON:0003509!5.79e-07!42;UBERON:0004572!5.79e-07!42;UBERON:0001007!9.39e-07!155;UBERON:0001555!9.39e-07!155;UBERON:0007026!9.39e-07!155 | |ontology_enrichment_uberon=UBERON:0000467!8.18e-18!625;UBERON:0000480!1.79e-17!626;UBERON:0002050!5.25e-16!605;UBERON:0005423!5.25e-16!605;UBERON:0000923!1.07e-15!604;UBERON:0005291!1.07e-15!604;UBERON:0006598!1.07e-15!604;UBERON:0002532!1.07e-15!604;UBERON:0000922!1.16e-15!612;UBERON:0000468!1.17e-15!659;UBERON:0000926!4.79e-14!448;UBERON:0004120!4.79e-14!448;UBERON:0006603!4.79e-14!448;UBERON:0002049!1.13e-08!79;UBERON:0007798!1.13e-08!79;UBERON:0004535!4.39e-08!110;UBERON:0000062!4.57e-08!511;UBERON:0001009!6.51e-08!113;UBERON:0003081!7.41e-08!216;UBERON:0004119!1.24e-07!169;UBERON:0000925!1.24e-07!169;UBERON:0006595!1.24e-07!169;UBERON:0001981!5.11e-07!60;UBERON:0007500!5.11e-07!60;UBERON:0004537!5.11e-07!60;UBERON:0006965!5.11e-07!60;UBERON:0004573!5.59e-07!33;UBERON:0004571!5.59e-07!33;UBERON:0001637!5.79e-07!42;UBERON:0003509!5.79e-07!42;UBERON:0004572!5.79e-07!42;UBERON:0001007!9.39e-07!155;UBERON:0001555!9.39e-07!155;UBERON:0007026!9.39e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.41e-07;33!UBERON:0004571;3.41e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005423,1.67e-13,581;UBERON:0000922,2.07e-13,592;UBERON:0002050,7.57e-13,564;UBERON:0000923,9.06e-12,560;UBERON:0010316,9.06e-12,560;UBERON:0005291,9.06e-12,560;UBERON:0006598,9.06e-12,560;UBERON:0010317,9.06e-12,560;UBERON:0002532,9.06e-12,560;UBERON:0003081,7.06e-11,203;UBERON:0002049,2.46e-09,78;UBERON:0007798,2.46e-09,78;UBERON:0004535,6.70e-09,109;UBERON:0001009,1.27e-08,112;UBERON:0000926,1.70e-08,315;UBERON:0004120,1.70e-08,315;UBERON:0006603,1.70e-08,315;UBERON:0004573,8.38e-08,33;UBERON:0004571,8.38e-08,33;UBERON:0007500,2.73e-07,59;UBERON:0001981,2.73e-07,59;UBERON:0004537,2.73e-07,59;UBERON:0006965,2.73e-07,59;UBERON:0000055,3.23e-07,68;UBERON:0001637,3.32e-07,42;UBERON:0003509,3.32e-07,42;UBERON:0004572,3.32e-07,42;UBERON:0001444,4.62e-07,49;UBERON:0003914,8.11e-07,117;UBERON:0000153,9.31e-07,62;UBERON:0007811,9.31e-07,62 | |||
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| ||
|short_description=p6@SVIL | |short_description=p6@SVIL | ||
}} | }} |
Latest revision as of 21:24, 17 September 2015
Short description: | p6@SVIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SVIL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375398, ENST00000375400, NM_003174, uc001iuu.1_5end |
EntrezGene: | SVIL |
HGNC: | 11480 |
UniProt: | O95425Q569J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.83e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.83e-17 | 42 |
defensive cell | 1.65e-12 | 48 |
phagocyte | 1.65e-12 | 48 |
macrophage dendritic cell progenitor | 3.91e-08 | 61 |
myeloid leukocyte | 5.63e-08 | 72 |
monopoietic cell | 2.40e-07 | 59 |
monocyte | 2.40e-07 | 59 |
monoblast | 2.40e-07 | 59 |
promonocyte | 2.40e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
developing anatomical structure | 1.67e-13 | 581 |
embryo | 2.07e-13 | 592 |
embryonic structure | 7.57e-13 | 564 |
germ layer | 9.06e-12 | 560 |
germ layer / neural crest | 9.06e-12 | 560 |
embryonic tissue | 9.06e-12 | 560 |
presumptive structure | 9.06e-12 | 560 |
germ layer / neural crest derived structure | 9.06e-12 | 560 |
epiblast (generic) | 9.06e-12 | 560 |
lateral plate mesoderm | 7.06e-11 | 203 |
vasculature | 2.46e-09 | 78 |
vascular system | 2.46e-09 | 78 |
cardiovascular system | 6.70e-09 | 109 |
circulatory system | 1.27e-08 | 112 |
mesoderm | 1.70e-08 | 315 |
mesoderm-derived structure | 1.70e-08 | 315 |
presumptive mesoderm | 1.70e-08 | 315 |
systemic artery | 8.38e-08 | 33 |
systemic arterial system | 8.38e-08 | 33 |
epithelial tube open at both ends | 2.73e-07 | 59 |
blood vessel | 2.73e-07 | 59 |
blood vasculature | 2.73e-07 | 59 |
vascular cord | 2.73e-07 | 59 |
vessel | 3.23e-07 | 68 |
artery | 3.32e-07 | 42 |
arterial blood vessel | 3.32e-07 | 42 |
arterial system | 3.32e-07 | 42 |
subdivision of head | 4.62e-07 | 49 |
epithelial tube | 8.11e-07 | 117 |
anterior region of body | 9.31e-07 | 62 |
craniocervical region | 9.31e-07 | 62 |