FFCP PHASE1:Hg19::chr10:30024716..30024739,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6840 | |EntrezGene=6840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11480 | |HGNC=11480 | ||
|TSSclassifier=strong | |||
|UniProt=O95425,Q569J5 | |UniProt=O95425,Q569J5 | ||
|association_with_transcript=0bp_to_ENST00000375398,ENST00000375400,NM_003174,uc001iuu.1_5end | |association_with_transcript=0bp_to_ENST00000375398,ENST00000375400,NM_003174,uc001iuu.1_5end | ||
|cluster_id=chr10:30024716..30024739,- | |||
|description=CAGE_peak_6_at_SVIL_5end | |description=CAGE_peak_6_at_SVIL_5end | ||
|id=chr10:30024716..30024739,- | |id=chr10:30024716..30024739,- |
Latest revision as of 21:24, 17 September 2015
Short description: | p6@SVIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SVIL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375398, ENST00000375400, NM_003174, uc001iuu.1_5end |
EntrezGene: | SVIL |
HGNC: | 11480 |
UniProt: | O95425Q569J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@SVIL |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.83e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.83e-17 | 42 |
defensive cell | 1.65e-12 | 48 |
phagocyte | 1.65e-12 | 48 |
macrophage dendritic cell progenitor | 3.91e-08 | 61 |
myeloid leukocyte | 5.63e-08 | 72 |
monopoietic cell | 2.40e-07 | 59 |
monocyte | 2.40e-07 | 59 |
monoblast | 2.40e-07 | 59 |
promonocyte | 2.40e-07 | 59 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
---|---|---|
developing anatomical structure | 1.67e-13 | 581 |
embryo | 2.07e-13 | 592 |
embryonic structure | 7.57e-13 | 564 |
germ layer | 9.06e-12 | 560 |
germ layer / neural crest | 9.06e-12 | 560 |
embryonic tissue | 9.06e-12 | 560 |
presumptive structure | 9.06e-12 | 560 |
germ layer / neural crest derived structure | 9.06e-12 | 560 |
epiblast (generic) | 9.06e-12 | 560 |
lateral plate mesoderm | 7.06e-11 | 203 |
Showing 1 to 10 of 31 entries