FFCP PHASE1:Hg19::chr4:46391956..46392031,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2555 | |EntrezGene=2555 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4076 | |HGNC=4076 | ||
|TSSclassifier=strong | |||
|UniProt=P47869 | |UniProt=P47869 | ||
|association_with_transcript=-11bp_to_ENST00000381620_5end | |association_with_transcript=-11bp_to_ENST00000381620_5end | ||
|cluster_id=chr4:46391956..46392031,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GABRA2_5end | |description=CAGE_peak_1_at_GABRA2_5end | ||
|id=chr4:46391956..46392031,- | |id=chr4:46391956..46392031,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.37e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.29e-49!115;UBERON:0003075!3.82e-46!86;UBERON:0007284!3.82e-46!86;UBERON:0002346!3.17e-45!90;UBERON:0005743!4.80e-44!86;UBERON:0001049!1.83e-42!57;UBERON:0005068!1.83e-42!57;UBERON:0006241!1.83e-42!57;UBERON:0007135!1.83e-42!57;UBERON:0000073!3.10e-42!94;UBERON:0001016!3.10e-42!94;UBERON:0001017!6.12e-42!82;UBERON:0003056!2.03e-36!61;UBERON:0000955!2.67e-36!69;UBERON:0006238!2.67e-36!69;UBERON:0002616!4.26e-36!59;UBERON:0003080!4.62e-35!42;UBERON:0002780!1.95e-34!41;UBERON:0001890!1.95e-34!41;UBERON:0006240!1.95e-34!41;UBERON:0004121!5.29e-34!169;UBERON:0000924!5.57e-34!173;UBERON:0006601!5.57e-34!173;UBERON:0000153!6.27e-33!129;UBERON:0007811!6.27e-33!129;UBERON:0000033!7.33e-33!123;UBERON:0001893!2.71e-31!34;UBERON:0002020!2.76e-31!34;UBERON:0003528!2.76e-31!34;UBERON:0002791!2.44e-30!33;UBERON:0001869!8.48e-30!32;UBERON:0002619!4.13e-24!22;UBERON:0000956!7.60e-23!25;UBERON:0000203!7.60e-23!25;UBERON:0000481!3.10e-22!347;UBERON:0001950!5.37e-22!20;UBERON:0000483!6.60e-19!309;UBERON:0000119!2.50e-18!312;UBERON:0000064!1.75e-17!219;UBERON:0000475!2.41e-16!365;UBERON:0000062!3.21e-13!511;UBERON:0000922!3.93e-12!612;UBERON:0002050!6.48e-12!605;UBERON:0005423!6.48e-12!605;UBERON:0000477!9.41e-12!286;UBERON:0000923!1.67e-11!604;UBERON:0005291!1.67e-11!604;UBERON:0006598!1.67e-11!604;UBERON:0002532!1.67e-11!604;UBERON:0004111!1.68e-11!241;UBERON:0000025!5.14e-11!194;UBERON:0000467!2.59e-10!625;UBERON:0000480!3.32e-10!626;UBERON:0002420!3.40e-10!9;UBERON:0007245!3.40e-10!9;UBERON:0010009!3.40e-10!9;UBERON:0010011!3.40e-10!9;UBERON:0000454!3.40e-10!9;UBERON:0000468!3.48e-10!659;UBERON:0002308!7.63e-10!9;UBERON:0000125!7.63e-10!9;UBERON:0001871!2.43e-09!7;UBERON:0003076!1.06e-08!15;UBERON:0003057!1.06e-08!15;UBERON:0009663!4.38e-08!7;UBERON:0005409!5.94e-08!35;UBERON:0002298!7.72e-08!8;UBERON:0000200!1.76e-07!6;UBERON:0001155!2.35e-07!9;UBERON:0000059!3.45e-07!11;UBERON:0004732!4.96e-07!13;UBERON:0000349!8.06e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.11e-33;32!UBERON:0003528;2.67e-33;34!UBERON:0002020;2.67e-33;34!UBERON:0001893;3.06e-33;34!UBERON:0002791;4.43e-33;32!UBERON:0002619;1.60e-32;22!UBERON:0002780;5.98e-32;41!UBERON:0001890;5.98e-32;41!UBERON:0001950;1.29e-29;20!UBERON:0000073;3.91e-29;53!UBERON:0002616;3.91e-29;53!UBERON:0000956;1.00e-27;25!UBERON:0000203;1.00e-27;25!UBERON:0001017;1.46e-22;75!UBERON:0000955;3.27e-22;68!UBERON:0001016;1.06e-19;83!UBERON:0007023;9.63e-14;114!UBERON:0002420;2.02e-13;9!UBERON:0007245;2.02e-13;9!UBERON:0010009;2.02e-13;9!UBERON:0010011;2.02e-13;9!UBERON:0000454;2.02e-13;9!UBERON:0005409;3.40e-13;22!UBERON:0000125;6.01e-13;9!UBERON:0002308;6.01e-13;9!UBERON:0011216;7.72e-13;132!UBERON:0000160;3.56e-12;17!UBERON:0001871;6.48e-11;6!UBERON:0009663;1.57e-10;7!UBERON:0004921;7.24e-10;33!UBERON:0000200;1.12e-09;6!UBERON:0004732;1.24e-09;13!UBERON:0000349;8.82e-09;5!UBERON:0004733;1.15e-08;12!UBERON:0002028;1.15e-08;12!UBERON:0002298;1.47e-08;6!UBERON:0002021;2.79e-08;5!UBERON:0001872;3.58e-08;5!UBERON:0000059;3.85e-08;11!UBERON:0001155;4.97e-08;9!UBERON:0010314;1.20e-07;132!UBERON:0000369;3.02e-07;4!UBERON:0002435;3.02e-07;4!UBERON:0000204;3.02e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.57e-55,81;UBERON:0001049,6.93e-55,56;UBERON:0005068,6.93e-55,56;UBERON:0006241,6.93e-55,56;UBERON:0007135,6.93e-55,56;UBERON:0003075,5.04e-53,82;UBERON:0007284,5.04e-53,82;UBERON:0000073,3.59e-51,53;UBERON:0002616,3.59e-51,53;UBERON:0001016,3.67e-51,89;UBERON:0007023,2.34e-50,114;UBERON:0002346,1.56e-49,86;UBERON:0000955,5.67e-47,68;UBERON:0006238,5.67e-47,68;UBERON:0003056,2.00e-45,61;UBERON:0002780,6.46e-44,41;UBERON:0001890,6.46e-44,41;UBERON:0003080,6.46e-44,41;UBERON:0006240,6.46e-44,41;UBERON:0001893,3.04e-39,34;UBERON:0003528,3.12e-39,34;UBERON:0002020,3.12e-39,34;UBERON:0010371,1.01e-38,104;UBERON:0011216,2.30e-38,223;UBERON:0010314,2.68e-38,132;UBERON:0001869,3.52e-37,32;UBERON:0002791,9.76e-37,32;UBERON:0004121,5.24e-34,171;UBERON:0000924,5.24e-34,171;UBERON:0006601,5.24e-34,171;UBERON:0002619,1.64e-32,22;UBERON:0001950,1.32e-29,20;UBERON:0000956,1.02e-27,25;UBERON:0000203,1.02e-27,25;UBERON:0000483,5.44e-14,306;UBERON:0000119,1.31e-13,309;UBERON:0002420,2.13e-13,9;UBERON:0007245,2.13e-13,9;UBERON:0010009,2.13e-13,9;UBERON:0010011,2.13e-13,9;UBERON:0000454,2.13e-13,9;UBERON:0000125,6.46e-13,9;UBERON:0002308,6.46e-13,9;UBERON:0000922,8.47e-13,592;UBERON:0005409,1.12e-12,25;UBERON:0005423,1.19e-12,581;UBERON:0002050,1.42e-12,564;UBERON:0000923,2.32e-12,560;UBERON:0010316,2.32e-12,560;UBERON:0005291,2.32e-12,560;UBERON:0006598,2.32e-12,560;UBERON:0010317,2.32e-12,560;UBERON:0002532,2.32e-12,560;UBERON:0000160,2.87e-12,17;UBERON:0000025,4.11e-12,192;UBERON:0003076,6.08e-12,15;UBERON:0003057,6.08e-12,15;UBERON:0004111,1.79e-11,240;UBERON:0001871,6.59e-11,6;UBERON:0009663,1.65e-10,7;UBERON:0000200,1.11e-09,6;UBERON:0004732,1.26e-09,13;UBERON:0000349,8.84e-09,5;UBERON:0004733,1.14e-08,12;UBERON:0002028,1.14e-08,12;UBERON:0007277,1.14e-08,12;UBERON:0002298,1.46e-08,6;UBERON:0002021,2.81e-08,5;UBERON:0000059,3.15e-08,11;UBERON:0001872,3.54e-08,5;UBERON:0001155,3.99e-08,9;UBERON:0000369,3.00e-07,4;UBERON:0002435,3.00e-07,4;UBERON:0000204,3.00e-07,4;UBERON:0010082,3.00e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,1.60709189178915,2.66075276955077,2.19586964232815,11.3296900305521,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06729878806013,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.53543174339509,1.0776853765575,1.14423332179421,0,0,0.70296429550139,0,0,0.747243402759005,0.23486899728753,0,0,12.4534044465485,12.0377630965533,11.1591843669827,0,0,0,0,0.505008341862199,1.00094815897571,4.15596173226274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95394953340702,0,4.91953754172454,7.3774158428366,0.109750285408626,0,0,0.0925884451585296,0,11.4392826380754,24.5363281442965,1.73895607462615,3.05262605013136,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14466990487221,0,0,0.325736184293735,1.42156779497018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.63921722356376,18.219579540067,10.8260433788877,4.02039036802437,14.0346525363696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0.464841513839837,10.877350463246,0,0,0.229628896329213,0,1.70461739447251,0,0.15403067420883,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0.512900250232778,0.328014645699706,2.60302715731442,0.618246069886334,0,0,0,0,0,0.096670718292122,0.462145851343933,0,0.413509717453592,0.107420244868274,1.30515024522806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09693213316207,0,0,0,0,8.27413304883248,3.56898138656871,4.47687128913608,0,0,0,7.31450608634386,0,0,0.136499911407986,22.624869112594,0,0,0,0,0.578775534266688,3.27947376023316,0.202910376962704,0,0,0,0,0,2.12856638442359,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,5.42080263306008,4.24761826123297,0,0,0,0,0,163.040214233673,158.815771127469,0,0,0,2.19172787076177,3.59169090190492,13.1005028884224,0,0,0,0,0.179021174675609,0,2.26879832964947,0,0,111.47326580095,82.1925349714002,35.930483640215,0,0,2.89999830173917,0,0,0,0,0.583209226766509,0,137.289914801145,98.6478867955837,65.6101466163458,55.1790507056811,77.4334761658294,82.7082947270476,0,0,1.76985594558733,0.113942055847001,0,0,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0.167821586975843,0.569261198172555,0,0,0,0.141353071433941,69.6771419969533,2.98578579323551,2.56526937059684,37.2728388409512,0.296521128680622,0.494255755786011,0.208843899010911,23.3207920113143,4.01288823649394,67.2338959231723,0,0,0,0,14.5188859258397,46.829132529465,2.21153028699708,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,1.35784623083787,0,4.97157629717171,5.20759313657653,0,97.3720041801414,0,0,0.213452994739353,5.19504984913539,0,4.81053703896846,0.857974989309823,0,0.124252535565433,0,0,0,28.7634973734427,0,84.0588404193705,22.3155767593949,0,0,0,0.558564802544508,2.52076466412852,0.717873024576814,0.199679000498991,0,0.223171457441873,0.671834724867263,0,1.16495949527454,0,0,0,0.492137407573744,0,249.702122600121,128.167405150993,0,0,0,0,0,85.4138766611827,0,5.91042804743986,4.40618540333984,0.422401346077626,0,0,6.4322579373603,1.98627591109629,0,0,0,0,0,2.21649806023215,0,50.7638170010163,0,0,67.2271373080063,22.2150770927719,0.342173675768659,0,0,0.471612915298998,0.414239055347196,0.992332043623902,0,0,0,0.544017803369474,0,0.306345576763462,0,0.314108192500469,132.024158815081,152.89890992216,79.1206682065079,33.8311425457142,11.5366213598326,19.8708489412427,2.49027542885215,0.624902039810533,0.758245587708239,0.856396000634902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14441591374926,0.521988583930423,0,0,0,1.07453304648892,0,0,0,0,0,0,0,0,88.2088822648042,0,0,0,0,0,0,0,1.28030075632969,0,0,0,0,0,0.127894371303652,0,0.786329709279482,0,0.509197589862076,0,0,3.35186950783946,0,2.12926711503384,5.60399523799829,0,2.4499638188256,89.9209151350433,104.855466480933,73.2719413072324,137.222847677065,71.0842183345245,51.729624843235,136.769871850178,7.13847101295772,0,0,0,0,0,4.8325194824207,0,1.0529445968896,0,1.56302802246618,0,0,0,62.7424161104886,118.723870989305,78.9543562634523,59.6108615822724,79.85832211666,0.548257766857182,1.98484471355718,0.527613733078862,0,1.07140367175657,0,6.06965604236632,1.59363533945908,0,0,8.91737649074576,14.545522857042,55.9726303019846,0,0,0.941917114206168,142.975186823562,0,30.1342377768134,0,0.47775168788705,3.57382720883282,0,0,0,3.20684545892101,0,0,0,0,0,0,1.27016115057279,0.4582137370881,0,0,0,0.098150233615243,0,0,0.615976841137482,2.3196288626764,9.71421986118279,0,0,0,0,0.989464650708862,0,1.08043821351123,1.5299169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| ||
|short_description=p1@GABRA2 | |short_description=p1@GABRA2 | ||
}} | }} |
Latest revision as of 21:38, 17 September 2015
Short description: | p1@GABRA2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GABRA2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -11bp_to_ENST00000381620_5end |
EntrezGene: | GABRA2 |
HGNC: | 4076 |
UniProt: | P47869 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data