FFCP PHASE1:Hg19::chr1:39547001..39547040,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23499 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13664 | |||
|TSSclassifier=strong | |||
|UniProt=B4DQX9 | |||
|association_with_transcript=13bp_to_ENST00000484793_5end | |||
|cluster_id=chr1:39547001..39547040,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_13_at_MACF1_5end | |||
|id=chr1:39547001..39547040,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.74e-15;82!UBERON:0006241;9.32e-08;3!UBERON:0003057;9.32e-08;3!UBERON:0006215;2.56e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.73e-45!115;UBERON:0001017!1.10e-43!82;UBERON:0001049!4.72e-43!57;UBERON:0005068!4.72e-43!57;UBERON:0006241!4.72e-43!57;UBERON:0007135!4.72e-43!57;UBERON:0005743!1.07e-41!86;UBERON:0000073!1.51e-39!94;UBERON:0001016!1.51e-39!94;UBERON:0002616!2.41e-36!59;UBERON:0000955!6.52e-36!69;UBERON:0006238!6.52e-36!69;UBERON:0003080!1.76e-35!42;UBERON:0002780!1.05e-34!41;UBERON:0001890!1.05e-34!41;UBERON:0006240!1.05e-34!41;UBERON:0003075!3.47e-32!86;UBERON:0007284!3.47e-32!86;UBERON:0002020!4.55e-30!34;UBERON:0003528!4.55e-30!34;UBERON:0001893!8.54e-30!34;UBERON:0002346!1.57e-29!90;UBERON:0002791!5.95e-29!33;UBERON:0001869!3.59e-28!32;UBERON:0003056!4.45e-25!61;UBERON:0000956!1.05e-21!25;UBERON:0000203!1.05e-21!25;UBERON:0002619!1.15e-19!22;UBERON:0004121!9.21e-19!169;UBERON:0000033!1.42e-18!123;UBERON:0000153!1.43e-18!129;UBERON:0007811!1.43e-18!129;UBERON:0001950!8.30e-18!20;UBERON:0000924!1.27e-17!173;UBERON:0006601!1.27e-17!173;UBERON:0000025!1.15e-11!194;UBERON:0000475!7.18e-11!365;UBERON:0002420!8.12e-10!9;UBERON:0007245!8.12e-10!9;UBERON:0010009!8.12e-10!9;UBERON:0010011!8.12e-10!9;UBERON:0000454!8.12e-10!9;UBERON:0002308!8.52e-10!9;UBERON:0000125!8.52e-10!9;UBERON:0003076!7.47e-09!15;UBERON:0003057!7.47e-09!15;UBERON:0004111!2.06e-08!241;UBERON:0002298!2.21e-08!8;UBERON:0000477!2.56e-08!286;UBERON:0000468!2.92e-08!659;UBERON:0009663!6.05e-08!7;UBERON:0000483!2.07e-07!309;UBERON:0000119!2.57e-07!312;UBERON:0004732!6.51e-07!13;UBERON:0000200!7.97e-07!6;UBERON:0000922!8.40e-07!612;UBERON:0000481!8.45e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.82e-54;34!UBERON:0002020;1.82e-54;34!UBERON:0001893;3.76e-54;34!UBERON:0002791;7.94e-54;32!UBERON:0001869;8.53e-54;32!UBERON:0002780;2.69e-48;41!UBERON:0001890;2.69e-48;41!UBERON:0000956;1.17e-45;25!UBERON:0000203;1.17e-45;25!UBERON:0000073;1.98e-45;53!UBERON:0002616;1.98e-45;53!UBERON:0002619;2.66e-41;22!UBERON:0001950;2.99e-37;20!UBERON:0000955;2.64e-34;68!UBERON:0001017;5.12e-31;75!UBERON:0001016;1.74e-28;83!UBERON:0002420;2.90e-19;9!UBERON:0000125;2.90e-19;9!UBERON:0007245;2.90e-19;9!UBERON:0002308;2.90e-19;9!UBERON:0010009;2.90e-19;9!UBERON:0010011;2.90e-19;9!UBERON:0000454;2.90e-19;9!UBERON:0009663;3.03e-15;7!UBERON:0004732;8.59e-15;13!UBERON:0004733;1.90e-13;12!UBERON:0002028;1.90e-13;12!UBERON:0007023;4.72e-13;114!UBERON:0002298;5.15e-13;6!UBERON:0000200;8.19e-13;6!UBERON:0000349;1.61e-11;5!UBERON:0001871;3.46e-11;6!UBERON:0002021;3.75e-11;5!UBERON:0001872;8.03e-11;5!UBERON:0011216;1.70e-10;132!UBERON:0000369;1.45e-09;4!UBERON:0002435;1.45e-09;4!UBERON:0000204;1.45e-09;4!UBERON:0002784;1.04e-08;4!UBERON:0002680;2.21e-08;9!UBERON:0001895;2.21e-08;9!UBERON:0002240;9.32e-08;3!UBERON:0005174;9.32e-08;3!UBERON:0001137;9.32e-08;3!UBERON:0005383;9.53e-08;3!UBERON:0005382;9.53e-08;3!UBERON:0000988;2.12e-07;3!UBERON:0001870;2.21e-07;3!UBERON:0001894;2.26e-07;7!UBERON:0010314;2.43e-07;132!UBERON:0001896;2.85e-07;3!UBERON:0005290;2.85e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.43e-87,56;UBERON:0005068,2.43e-87,56;UBERON:0006241,2.43e-87,56;UBERON:0007135,2.43e-87,56;UBERON:0001017,1.03e-81,81;UBERON:0000073,6.62e-81,53;UBERON:0002616,6.62e-81,53;UBERON:0001016,4.85e-77,89;UBERON:0000955,4.30e-73,68;UBERON:0006238,4.30e-73,68;UBERON:0002780,1.40e-68,41;UBERON:0001890,1.40e-68,41;UBERON:0003080,1.40e-68,41;UBERON:0006240,1.40e-68,41;UBERON:0003075,5.29e-64,82;UBERON:0007284,5.29e-64,82;UBERON:0003528,6.31e-64,34;UBERON:0002020,6.31e-64,34;UBERON:0001893,2.49e-63,34;UBERON:0002346,2.83e-60,86;UBERON:0001869,8.38e-60,32;UBERON:0002791,8.73e-60,32;UBERON:0003056,3.41e-49,61;UBERON:0010371,6.42e-49,104;UBERON:0000956,9.29e-46,25;UBERON:0000203,9.29e-46,25;UBERON:0007023,9.85e-42,114;UBERON:0002619,2.39e-41,22;UBERON:0010314,2.90e-38,132;UBERON:0001950,2.59e-37,20;UBERON:0004121,5.62e-37,171;UBERON:0000924,5.62e-37,171;UBERON:0006601,5.62e-37,171;UBERON:0011216,1.48e-29,223;UBERON:0002420,2.65e-19,9;UBERON:0007245,2.65e-19,9;UBERON:0010009,2.65e-19,9;UBERON:0010011,2.65e-19,9;UBERON:0000454,2.65e-19,9;UBERON:0000125,2.95e-19,9;UBERON:0002308,2.95e-19,9;UBERON:0000025,3.12e-19,192;UBERON:0003076,4.52e-19,15;UBERON:0003057,4.52e-19,15;UBERON:0009663,2.77e-15,7;UBERON:0004732,8.83e-15,13;UBERON:0004733,2.08e-13,12;UBERON:0002028,2.08e-13,12;UBERON:0007277,2.08e-13,12;UBERON:0004111,4.82e-13,240;UBERON:0002298,6.23e-13,6;UBERON:0000200,6.90e-13,6;UBERON:0000349,1.75e-11,5;UBERON:0001871,3.21e-11,6;UBERON:0002021,4.05e-11,5;UBERON:0001872,7.81e-11,5;UBERON:0000483,1.14e-09,306;UBERON:0000369,1.47e-09,4;UBERON:0002435,1.47e-09,4;UBERON:0000204,1.47e-09,4;UBERON:0010082,1.47e-09,4;UBERON:0000119,1.98e-09,309;UBERON:0002784,1.04e-08,4;UBERON:0002680,2.24e-08,9;UBERON:0001895,2.24e-08,9;UBERON:0010092,2.24e-08,9;UBERON:0002240,9.04e-08,3;UBERON:0005174,9.04e-08,3;UBERON:0001137,9.04e-08,3;UBERON:0005383,9.24e-08,3;UBERON:0005382,9.24e-08,3;UBERON:0000922,1.39e-07,592;UBERON:0002050,1.43e-07,564;UBERON:0001870,2.00e-07,3;UBERON:0001894,2.30e-07,7;UBERON:0006222,2.30e-07,7;UBERON:0000988,2.31e-07,3;UBERON:0000923,2.61e-07,560;UBERON:0010316,2.61e-07,560;UBERON:0005291,2.61e-07,560;UBERON:0006598,2.61e-07,560;UBERON:0010317,2.61e-07,560;UBERON:0002532,2.61e-07,560;UBERON:0001896,3.16e-07,3;UBERON:0005290,3.16e-07,3;UBERON:0010096,3.16e-07,3;UBERON:0005423,3.44e-07,581 | |||
|phase1_expression=0.908391896352783,1.07050261945492,3.38290569830331,0,0.446961094427288,0,0,1.26343974685366,3.13422753839806,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,2.57612388417951,1.23186982565596,1.63205431473244,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.383587685530591,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.175669571386252,2.88153966094968,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0.662045904066094,0,0,0,0,0,0.933633106199299,0,0,0,1.15235184896,0,0,0,0.149448680551801,0,0,0,0,0,0.309977343527296,0,0.247266929278557,0,0,0,0.125118519871964,0,0.877955241761676,0.612975591598039,0,0,0.538168907066586,0,0,0,0.103052529238439,0,0,0.337552664482532,0.292311015483596,0.504867548488229,0.184099797284599,0.323292113637624,0.355009592516614,0.10075209822764,0,0,0,0,0.487894824518382,0.530119073285941,0.348581828608555,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.72631925345123,0,0,0.171567810298526,0,0,0,0,0,0,0,1.04337364477569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.508189248444927,7.8083912314573,5.41302168944387,2.84777651068393,5.10351001322531,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0,1.48418066444991,0.154209693802656,0.355123450626254,0.492762936082855,0,0.348631135379878,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.751941714077915,0.435050081742686,0,0.445160178233687,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0.565621727814851,1.13008116620243,0.551365343546124,0,0,0.578775534266688,2.62357900818653,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0.411362273086194,0,0.540031437238115,0,0.320472213382419,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,1.17206543417515,0,0,0,0,1.18785872333055,0,12.9239194209619,12.0975698113041,0.111308705022906,0,0.422250816255987,0.597743964753209,0.828851746593443,0,0,0,0,0,0,0,0.295930216910801,0,0,9.69332746095218,4.91670920257812,11.9768278800717,0,0,2.89999830173917,0,0,0,0,0,1.56262495439963,14.1718621730214,12.9038189329187,10.6807215421958,8.40402375477307,7.97978571174578,3.51016635446356,0,0,0.769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,3.70706231393724,0.802577647298789,7.49646226321085,0,0,0.728341138602278,0,0,9.79432837217568,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0.0730893170861856,0,0.484945082442097,1.94163478721301,2.71176888936639,0,0,7.7239171066172,0,0,0,0,0,0.343609788497747,0.514784993585894,0,0,0,0.407712618220842,0.627617077873999,0,0,14.4100869290349,8.76194424908756,0,0,0,0.837847203816763,0.687481272035051,0,0.399358000997982,0.429226048136571,0.89268582976749,0.604651252380536,0,0,0,0,0.0674035438541849,0,0,16.6998234859954,8.30840777280611,0.160753148465019,0.962776056180637,0,0,0,6.31795389243457,0,0.315222829196793,0.734364233889974,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0.226624183040251,1.17241786942466,0,12.5404467670704,12.0331667585848,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,2.72008901684737,0,0.612691153526923,0.983617892129413,0,8.86068179966986,7.68765468882368,12.769474932063,12.6150023051816,8.20874981372707,5.34029065295898,0,0,0,0,0,0,0.144921028610825,0.298509605773748,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0,0.318593534327405,0,0.776314784381297,0,1.06336685823198,2.60872530905867,0.150257608997218,0.380805212168795,0,0.545545977607678,0.322231671127465,1.85613503951397,1.59238355479446,0,0,0.673498977531838,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0,0,0,0,0,0,0,12.9962929982627,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.127894371303652,0.107824811396682,3.30258477897382,0,0,0,0,0,0,0.0788617450012534,0.80057074828547,0,0,7.4505901111893,7.08482881627925,13.0899764426864,7.79442184114869,20.1657356977374,4.91016492495947,8.55820921848811,1.42769420259154,0,0,0,0,0,0,0,2.40673050717623,0.40341013740704,0,0,0,0,6.01084503103712,5.46754669029693,14.0547021620805,6.72207588055412,9.29857175330973,0,0.992422356778588,0,0,4.28561468702629,3.36283722218824,0.606965604236632,0.227662191351298,0.0887023701626388,0,0,5.70945757005386,4.99873079077653,0,0,0.235479278551542,11.9407848336161,0,3.65263488203798,0,0,0.857718530119876,1.42212250559454,0,0.173858272302579,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0.102662806856247,1.1598144313382,1.45713297917742,1.40363678077263,0.397901550322736,0.118920090777569,0,0.219881033490858,0,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,13.7415926980462,20.1991552222418,8.453114551668,0.509781344063451,0.281951753939561,0.515663103788617,0,0,0,0,0.730336388246517,0,5.8769229092095,0,6.25521709756415,12.2178193295306,1.0580536810308,0.743990036333503,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,2.72803313585662,7.23503151421682,13.2667110313405,5.99911375998992,0.213233981900981,1.1903221573187,0,0.248298857183432,0.112131862580613,0.0636471582781649,0.808468755832877,0,0.684466602170562,0,0.143444410785353,0.332660356546013,0.0814032686109745,0,0,0,2.34640942403454,0.122241444182866,1.62758471326295,1.33151354837103,0.402547587182052,0 | |||
|short_description=p13@MACF1 | |||
}} |
Latest revision as of 23:14, 17 September 2015
Short description: | p13@MACF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MACF1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 13bp_to_ENST00000484793_5end |
EntrezGene: | MACF1 |
HGNC: | 13664 |
UniProt: | B4DQX9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data