FFCP PHASE1:Hg19::chr4:48988301..48988312,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80157 | |EntrezGene=80157 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26133 | |HGNC=26133 | ||
|TSSclassifier=strong | |||
|UniProt=D6RDZ8 | |UniProt=D6RDZ8 | ||
|association_with_transcript=-17bp_to_ENST00000514053_5end | |association_with_transcript=-17bp_to_ENST00000514053_5end | ||
|cluster_id=chr4:48988301..48988312,+ | |||
|coexpression_cluster_id=C4421 | |||
|description=CAGE_peak_2_at_CWH43_5end | |description=CAGE_peak_2_at_CWH43_5end | ||
|id=chr4:48988301..48988312,+ | |id=chr4:48988301..48988312,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.10e-11!43;CL:0002159!6.58e-10!13;CL:0002368!1.19e-09!13;CL:0000622!3.73e-09!5;CL:0000154!1.26e-07!6;CL:0000223!3.69e-07!59 | |ontology_enrichment_celltype=CL:0002076!4.10e-11!43;CL:0002159!6.58e-10!13;CL:0002368!1.19e-09!13;CL:0000622!3.73e-09!5;CL:0000154!1.26e-07!6;CL:0000223!3.69e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002621;6.21e-10;3!CL:0002252;2.17e-08;1!CL:0000244;1.16e-07;4!CL:0000731;1.16e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,6.81e-10,3;CL:0002252,2.33e-08,1;CL:0000244,1.08e-07,4;CL:0000731,1.08e-07,4;CL:0002076,3.43e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.02e-08;1!UBERON:0009143;2.17e-08;1!UBERON:0001045;4.56e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.97e-14!115;UBERON:0004119!6.52e-13!169;UBERON:0000925!6.52e-13!169;UBERON:0006595!6.52e-13!169;UBERON:0000161!1.67e-12!35;UBERON:0001004!1.63e-11!72;UBERON:0001007!5.59e-10!155;UBERON:0001555!5.59e-10!155;UBERON:0007026!5.59e-10!155;UBERON:0006947!2.06e-09!3;UBERON:0004054!2.06e-09!3;UBERON:0000166!2.38e-09!21;UBERON:0001008!5.12e-09!45;UBERON:0004921!1.51e-08!129;UBERON:0004185!1.51e-08!129;UBERON:0000065!3.82e-08!53;UBERON:0000165!4.70e-08!28;UBERON:0000930!4.70e-08!28;UBERON:0006554!6.54e-08!44;UBERON:0003102!1.25e-07!95;UBERON:0001044!1.64e-07!6;UBERON:0003293!1.64e-07!6;UBERON:0003294!1.64e-07!6;UBERON:0010047!1.64e-07!6;UBERON:0000167!1.64e-07!6;UBERON:0000464!3.55e-07!104;UBERON:0005904!3.84e-07!4;UBERON:0002530!4.39e-07!59;UBERON:0003101!5.86e-07!22;UBERON:0000079!5.86e-07!22;UBERON:0000077!6.34e-07!130;UBERON:0003064!8.13e-07!37;UBERON:0000341!9.86e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!1.97e-14!115;UBERON:0004119!6.52e-13!169;UBERON:0000925!6.52e-13!169;UBERON:0006595!6.52e-13!169;UBERON:0000161!1.67e-12!35;UBERON:0001004!1.63e-11!72;UBERON:0001007!5.59e-10!155;UBERON:0001555!5.59e-10!155;UBERON:0007026!5.59e-10!155;UBERON:0006947!2.06e-09!3;UBERON:0004054!2.06e-09!3;UBERON:0000166!2.38e-09!21;UBERON:0001008!5.12e-09!45;UBERON:0004921!1.51e-08!129;UBERON:0004185!1.51e-08!129;UBERON:0000065!3.82e-08!53;UBERON:0000165!4.70e-08!28;UBERON:0000930!4.70e-08!28;UBERON:0006554!6.54e-08!44;UBERON:0003102!1.25e-07!95;UBERON:0001044!1.64e-07!6;UBERON:0003293!1.64e-07!6;UBERON:0003294!1.64e-07!6;UBERON:0010047!1.64e-07!6;UBERON:0000167!1.64e-07!6;UBERON:0000464!3.55e-07!104;UBERON:0005904!3.84e-07!4;UBERON:0002530!4.39e-07!59;UBERON:0003101!5.86e-07!22;UBERON:0000079!5.86e-07!22;UBERON:0000077!6.34e-07!130;UBERON:0003064!8.13e-07!37;UBERON:0000341!9.86e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001043;2.36e-10;3!UBERON:0001723;3.84e-10;3!UBERON:0001033;3.84e-10;3!UBERON:0001949;6.21e-10;3!UBERON:0000486;3.57e-09;12!UBERON:0000998;1.02e-08;1!UBERON:0006868;1.02e-08;1!UBERON:0005795;2.17e-08;1!UBERON:0001154;4.56e-08;1!UBERON:0001153;4.56e-08;1!UBERON:0009854;4.56e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,2.25e-10,3;UBERON:0009143,2.25e-10,3;UBERON:0004119,2.57e-10,160;UBERON:0000925,2.57e-10,160;UBERON:0006595,2.57e-10,160;UBERON:0001723,2.84e-10,3;UBERON:0001033,2.84e-10,3;UBERON:0010056,2.84e-10,3;UBERON:0001949,6.81e-10,3;UBERON:0008814,1.19e-09,18;UBERON:0001007,5.79e-09,145;UBERON:0001555,5.79e-09,145;UBERON:0007026,5.79e-09,145;UBERON:0000998,1.05e-08,1;UBERON:0006868,1.05e-08,1;UBERON:0000161,1.24e-08,36;UBERON:0001154,6.24e-08,1;UBERON:0001153,6.24e-08,1;UBERON:0001045,6.24e-08,1;UBERON:0000166,1.11e-07,22 | |||
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| ||
|short_description=p2@CWH43 | |short_description=p2@CWH43 | ||
}} | }} |
Latest revision as of 23:25, 17 September 2015
Short description: | p2@CWH43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CWH43_5end |
Coexpression cluster: | C4421_glassy_squamous_colon_nasal_salivary_Prostate_seminal |
Association with transcript: | -17bp_to_ENST00000514053_5end |
EntrezGene: | CWH43 |
HGNC: | 26133 |
UniProt: | D6RDZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 6.81e-10 | 3 |
epithelial cell of esophagus | 2.33e-08 | 1 |
transitional epithelial cell | 1.08e-07 | 4 |
urothelial cell | 1.08e-07 | 4 |
endo-epithelial cell | 3.43e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
esophagus | 2.25e-10 | 3 |
esophageal region | 2.25e-10 | 3 |
endoderm-derived structure | 2.57e-10 | 160 |
endoderm | 2.57e-10 | 160 |
presumptive endoderm | 2.57e-10 | 160 |
tongue | 2.84e-10 | 3 |
gustatory system | 2.84e-10 | 3 |
future tongue | 2.84e-10 | 3 |
gingival epithelium | 6.81e-10 | 3 |
pharyngeal arch system | 1.19e-09 | 18 |
digestive system | 5.79e-09 | 145 |
digestive tract | 5.79e-09 | 145 |
primitive gut | 5.79e-09 | 145 |
seminal vesicle | 1.05e-08 | 1 |
seminal fluid secreting gland | 1.05e-08 | 1 |
orifice | 1.24e-08 | 36 |
vermiform appendix | 6.24e-08 | 1 |
caecum | 6.24e-08 | 1 |
midgut | 6.24e-08 | 1 |
oral opening | 1.11e-07 | 22 |