FFCP PHASE1:Hg19::chr2:64881404..64881420,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:64881404..64881420,- to FFCP PHASE1:Hg19::chr2:64881404..64881420,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9792 | |EntrezGene=9792 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30784 | |HGNC=30784 | ||
|TSSclassifier=strong | |||
|UniProt=Q14140 | |UniProt=Q14140 | ||
|association_with_transcript=-357bp_to_ENST00000313349_5end | |||
|cluster_id=chr2:64881404..64881420,- | |||
|description=CAGE_peak_9_at_SERTAD2_5end | |||
|id=chr2:64881404..64881420,- | |||
|ontology_enrichment_celltype=CL:0002057!2.32e-08!42;CL:0000860!4.30e-08!45;CL:0000548!1.32e-07!679;CL:0000004!1.32e-07!679;CL:0000255!1.32e-07!679;CL:0000012!1.48e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002393;6.52e-09;6!CL:0002397;6.52e-09;6!CL:0000346;3.51e-08;3!CL:1000428;3.51e-08;3!CL:0002581;3.30e-07;1!CL:0000511;9.47e-07;1!CL:0002625;9.47e-07;1!CL:0002174;9.47e-07;1!CL:0000216;9.47e-07;1!CL:0000501;9.47e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.70e-08,3;CL:1000428,1.70e-08,3;CL:0000473,9.48e-08,48;CL:0000234,9.48e-08,48;CL:0002581,2.95e-07,1;CL:0000860,3.57e-07,42;CL:0002057,3.57e-07,42;CL:0000511,4.43e-07,1;CL:0002625,4.43e-07,1;CL:0000216,4.43e-07,1;CL:0002174,7.39e-07,1;CL:0000501,7.39e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;3.51e-08;3!UBERON:0001992;3.51e-08;3!UBERON:0001136;9.47e-07;1!UBERON:0001343;9.47e-07;1!UBERON:0004910;9.47e-07;1!UBERON:0004813;9.47e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.70e-08,3;UBERON:0001992,1.70e-08,3;UBERON:0001136,4.43e-07,1;UBERON:0001343,4.43e-07,1;UBERON:0004910,4.43e-07,1;UBERON:0005154,4.43e-07,1;UBERON:0005295,4.43e-07,1;UBERON:0004813,4.43e-07,1;UBERON:0005297,4.43e-07,1;UBERON:0005294,4.43e-07,1;UBERON:0010141,4.43e-07,1;UBERON:0005891,4.43e-07,1 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.422863212287913,1.0007329835313,0,0,0,0.631719873426831,0.522371256399677,0.245733936501509,1.39560233594486,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0,0,0,0.738726348460727,0.408001382488506,0,0.286235987131057,0,0.376627918784408,0.0764134057479513,0,0,0.786728553697808,0.383829398097213,0.77408061658038,0,0.6024118375565,0.369754010166788,0.0774672005803016,0,0.293600439334847,1.10799081706375,2.20598892217156,1.73608696572681,0,0,0,0.145398238779565,0.755751887377619,0.242584061187816,1.39457422143411,0.822335776043652,1.23882548358041,0.28769239232215,0.512321413058201,0.236482229888585,1.03423704220986,0.645484683583826,1.35426486594342,0.376484679085209,0,0.449446968890169,0.612167784741805,0.641858054152187,0.639337125799041,0,0.199463657621632,0,0.580418477257168,1.13477044938228,0,0.502497330513487,0.521482918420201,0.434377689410233,0,0.368277635987565,0,0,0.212604299965044,0,0,0.150176892841506,0,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0,0,0.68725489096526,0,0,0,0,0,0,0,0,0,0.201606743224732,1.06976078313403,0.724122019413995,0,0,0,0,1.00267582127178,0.724232594804119,0,0,0.472674085820339,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0.354668382198357,0,0,0.74000264525148,0,0,0,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0,0,0,0.150238058906597,0.226864366320042,1.25572744982203,0.213557388818567,0.211931901159562,0,0.412210116953756,0.515281080091258,0.37223371266318,0.506328996723799,0.68205903612839,0.504867548488229,0.184099797284599,0,0.710019185033229,0.604512589365842,0.169560592310488,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0,1.38134921352481,0,0.721879481669586,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0.383382679165211,0,0.088048434013226,0.207328115540772,0.144119953416961,0.12624243342638,0,0,1.17217447210047,0,0.205654985406647,0.300343057843917,0,0.112131084345361,0,0,0.258543431515556,0,0.845302752556,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,1.2162378064119,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0.716243852959582,0,0.394061520403854,0,1.02674429023799,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.542530047399471,0.415941723061614,0.356857977594324,0.157702415033935,0.468565659970853,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0,0,0.343143423810856,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0.153461973288062,0,0.896974044789907,0.511707249066704,0.160853921143607,2.96836132889982,0.308419387605311,0.177561725313127,0.246381468041427,0,0.232420756919918,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0.902399225814824,0.462092022626489,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,1.11937377361089,0,0,0.256450125116389,0.656029291399411,0.650756789328606,0.206082023295445,2.28923662045859,0.742585499285292,0,0,1.6068392984416,0.193341436584244,0,0.15350367472613,0.827019434907183,0.214840489736547,0,0.170453254832202,0.445160178233687,0,0,0,0.2023155617111,2.32422774648643,0,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0,0,0,0,0,0,0,0.359744915166629,0,0,0.202182481573316,0,0,0,0.487426979262569,0,0,0.424216295861138,0,0,0,0.876901770507525,0,0,0.202910376962704,0,0.281695602532241,0,0,0.35667105148125,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0.71623345421307,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0.409074730008619,0,0.311039587661807,0.359473404589307,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0.762760950878299,0,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0.455768223388005,0,0.0897576444097721,0.217294743844016,0,0.274792780205587,0,0,0,0,0,0,0,0.189753732724185,0,0,0.652931232636591,0.141353071433941,0.216388639742091,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,0.1956646189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| ||
|short_description=p9@SERTAD2 | |||
}} | }} |
Latest revision as of 23:52, 17 September 2015
Short description: | p9@SERTAD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SERTAD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -357bp_to_ENST00000313349_5end |
EntrezGene: | SERTAD2 |
HGNC: | 30784 |
UniProt: | Q14140 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.70e-08 | 3 |
stem cell of epidermis | 1.70e-08 | 3 |
defensive cell | 9.48e-08 | 48 |
phagocyte | 9.48e-08 | 48 |
perirenal preadipocyte | 2.95e-07 | 1 |
classical monocyte | 3.57e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.57e-07 | 42 |
androgen binding protein secreting cell | 4.43e-07 | 1 |
seminiferous tubule epithelial cell | 4.43e-07 | 1 |
Sertoli cell | 4.43e-07 | 1 |
follicular cell of ovary | 7.39e-07 | 1 |
granulosa cell | 7.39e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.70e-08 | 3 |
papillary layer of dermis | 1.70e-08 | 3 |
mesothelium | 4.43e-07 | 1 |
seminiferous tubule of testis | 4.43e-07 | 1 |
epithelium of male gonad | 4.43e-07 | 1 |
epithelial cord | 4.43e-07 | 1 |
sex cord | 4.43e-07 | 1 |
seminiferous tubule epithelium | 4.43e-07 | 1 |
testis sex cord | 4.43e-07 | 1 |
genital ridge | 4.43e-07 | 1 |
primitive sex cord of indifferent gonad | 4.43e-07 | 1 |
coelomic epithelium | 4.43e-07 | 1 |