FFCP PHASE1:Hg19::chr9:86983573..86983587,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64078 | |EntrezGene=64078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16484 | |HGNC=16484 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HAS3 | |UniProt=Q9HAS3 | ||
|association_with_transcript=-160bp_to_NM_022127,uc004anu.1_5end | |||
|cluster_id=chr9:86983573..86983587,- | |||
|coexpression_cluster_id=C433 | |||
|description=CAGE_peak_6_at_SLC28A3_5end | |||
|id=chr9:86983573..86983587,- | |||
|ontology_enrichment_celltype=CL:0000235!4.91e-20!10;CL:0002274!1.05e-14!5;CL:0000457!1.05e-14!5;CL:0002191!1.05e-14!5;CL:0000097!1.05e-14!5;CL:0000831!1.05e-14!5;CL:0002028!1.05e-14!5;CL:0000763!7.25e-13!112;CL:0000049!7.25e-13!112;CL:0000766!1.39e-12!76;CL:0000839!1.42e-11!70;CL:0000557!2.18e-11!71;CL:0002032!4.19e-09!165;CL:0000837!4.19e-09!165;CL:0002557!7.85e-09!1;CL:0000037!1.29e-08!172;CL:0000566!1.29e-08!172;CL:0000163!2.15e-08!9;CL:0000988!5.56e-08!182;CL:0002537!4.70e-07!5;CL:0000738!4.90e-07!140;CL:0002031!6.26e-07!124;CL:0002194!7.47e-07!63;CL:0000576!7.47e-07!63;CL:0000040!7.47e-07!63;CL:0000559!7.47e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.49e-136;6!CL:0000473;1.27e-18;39!CL:0000234;1.27e-18;39!CL:0000766;6.05e-07;69!CL:0000840;8.97e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.61e-136,6;CL:0002194,3.46e-20,59;CL:0000576,3.46e-20,59;CL:0000040,3.46e-20,59;CL:0000559,3.46e-20,59;CL:0002009,1.49e-19,61;CL:0000839,3.91e-18,66;CL:0000557,7.10e-18,67;CL:0000473,1.22e-17,48;CL:0000234,1.22e-17,48;CL:0000766,1.10e-16,72;CL:0000763,2.52e-11,108;CL:0000049,2.52e-11,108;CL:0002087,1.15e-10,115;CL:0002031,3.06e-10,120;CL:0000738,4.36e-09,136;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0000037,2.00e-07,168;CL:0000988,4.60e-07,177;CL:0000840,8.48e-07,5;CL:0001029,8.48e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000305!1.63e-10!7;UBERON:0002390!1.87e-10!102;UBERON:0003061!1.87e-10!102;UBERON:0002371!6.52e-10!80;UBERON:0002193!2.54e-09!112;UBERON:0004871!2.92e-09!8;UBERON:0001474!4.25e-09!86;UBERON:0002405!5.09e-09!115;UBERON:0003081!2.88e-08!216;UBERON:0004765!1.75e-07!101;UBERON:0001434!1.75e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.61e-16,76;UBERON:0001474,9.81e-15,82;UBERON:0004765,1.76e-13,90;UBERON:0002405,4.60e-13,93;UBERON:0002390,2.00e-12,98;UBERON:0003061,2.00e-12,98;UBERON:0001434,3.45e-12,100;UBERON:0002193,2.52e-11,108;UBERON:0002204,1.81e-07,167 | |||
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|short_description=p6@SLC28A3 | |||
}} | }} |
Latest revision as of 00:47, 18 September 2015
Short description: | p6@SLC28A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC28A3_5end |
Coexpression cluster: | C433_Macrophage_Monocytederived_Dendritic_Neutrophils_Urothelial_Eosinophils_immature |
Association with transcript: | -160bp_to_NM_022127, uc004anu.1_5end |
EntrezGene: | SLC28A3 |
HGNC: | 16484 |
UniProt: | Q9HAS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.61e-136 | 6 |
monopoietic cell | 3.46e-20 | 59 |
monocyte | 3.46e-20 | 59 |
monoblast | 3.46e-20 | 59 |
promonocyte | 3.46e-20 | 59 |
macrophage dendritic cell progenitor | 1.49e-19 | 61 |
myeloid lineage restricted progenitor cell | 3.91e-18 | 66 |
granulocyte monocyte progenitor cell | 7.10e-18 | 67 |
defensive cell | 1.22e-17 | 48 |
phagocyte | 1.22e-17 | 48 |
myeloid leukocyte | 1.10e-16 | 72 |
myeloid cell | 2.52e-11 | 108 |
common myeloid progenitor | 2.52e-11 | 108 |
nongranular leukocyte | 1.15e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.06e-10 | 120 |
leukocyte | 4.36e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic cell | 4.60e-07 | 177 |
immature conventional dendritic cell | 8.48e-07 | 5 |
common dendritic progenitor | 8.48e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.61e-16 | 76 |
bone element | 9.81e-15 | 82 |
skeletal element | 1.76e-13 | 90 |
immune system | 4.60e-13 | 93 |
hematopoietic system | 2.00e-12 | 98 |
blood island | 2.00e-12 | 98 |
skeletal system | 3.45e-12 | 100 |
hemolymphoid system | 2.52e-11 | 108 |
musculoskeletal system | 1.81e-07 | 167 |